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GEISHA - A Chicken Embryo Gene Expression Database
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Gene Expression Report
GEISHA IdALDH1.Peters.2002
 NCBIEnsembl
Gene NameALDH1A1 
AliasesGGADHR, ALDH class 1|aldehyde dehydrogenase 1A1|cytosolic aldehyde dehydrogenase 
Gene Descriptionaldehyde dehydrogenase 1 family, member A1 
Gene Ontologyshow
GO:0001758 retinal dehydrogenase activity IEA
GO:0005737 cytoplasm IEA
GO:0016491 oxidoreductase activity IEA
GO:0055114 oxidation reduction IEA
Ensembl Genome Map
contig view
CitationPeters MA, Cepko CL (2002). The dorsal-ventral axis of the neural retina is divided into multiple domains of restricted gene expression which exhibit features of lineage compartments. Dev Biol. 2002 Nov 1;251(1):59-73.
Copyright"Reprinted from Developmental Biology, 251(1), Peters MA, Cepko CL, The dorsal-ventral axis of the neural retina is divided into multiple domains of restricted gene expression which exhibit features of lineage compartments, 59-73, Copyright (2002), with permission from Elsevier". Copyright © ( 2002) Elsevier B.V. All rights reserved.
CommentsAccording to authors , "Probes for Pax2, Bmp4, Tbx5, SOHo, ephrin-B1, ephrin-B2, EphB1-B3, ALDH3/ALDH6, and ALDH1 were prepared as described (Deitcher et al., 1994; Godbout et al., 1996; Holash et al., 1997; Logan et al., 1998; Golden et al., 1999; Grun et al., 2000)." In Godbout they reported: Chicken CA-I1 and ALDH cDNAs isolated from a day 3.5 chick retina cDNA library (Godbout, 1992) were used for the synthesis of RNA probes. As information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #X58869).
Complete Sequenceshow
TCTGGGTATGGAGAGAGGAGAGCCCAAGCCTCAGAAATGGGGGATTGTTAGTTAGGTCTTCTCCTGGCACTAGAGCCTA
AACACTACATTACCTGCACTGTGCACACACCTGAAACCTGGTCTGTTAAATTTGTGTGCTGCTGTTTTATTAAGCACTG
TATTACCTAACCCAACAAATAATCTAAAGGTAGTTTTGAAGTGAGGTCAGAGTCAGCTCAGCACTGGATGTATTTAAGG
TCATTAAAGATTCAGTGTCATGGTTTTGCATGGGAATCTTCCAAAGAAGCTCTGTCAAAAAGCAGTTATTCAAAAAGCT
GTTATAATACATTCAATATAAACATGTCTATGCACAAAATAAATTATAAGAAGAAAATTCATATGTAAAGATCTTTGTG
CATAAGCATAAAATCTAGAGATTATTCAAGGTTCAGAAAGTAGTACATTGCCTTTACACTGGGATCATTCTCTTCTACC
TACTTTGTGTGTTTCTAATTCCTAGCACAAGGAAAACTACATTTAATTTTGTGTAATACAGACTAACAAAACCTGATGT
TTCCCTTGCTTTTTTCTTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT
TTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTCTTTCCTTTCCTTCTTTTTAT
TTTTTTTAAGCTAAGGAAGAAGAAGAGGAACAAACCACTTTCTTCCATGAGTATTTTGCTGACAGAAATACTTAAATCA
ATAAATTGTGGAAAAAGCTGTTGATAGCGTTGCAACAGTTGTATTTTGCAATTTGAGCTGTTCTCCATTGGGTGCTGAA
GTATTTCCGAACAAAAAGCATAAGTCTGAGTTCAGTACAGCATTGGATTGAGTATATTTCTTGCATGTTCCAGCAGGGA
ATTGTTGTCTTTTCTTGGAAATTAAAGGCAAATCCATTCAGAGGGCTCTCTTCTCACCACTTTGTAGCGTAGCAGTATC
CGCACTTCCTCTCCCTCCCCCATTTTTCTTTTCCTTTCTCCATCCCCTTTAAATTGTAATTCAATCTCTTCCAATTCAT
GATCTCTTTTCTCTTTTTGCACTCCCTCCACCCTCTCTCTCTCTCATTAGTTTAACTTGAGTTAATTAGGAATAGTAGG
CAGCCCTCAATCTGTTATGTGTTAAAATAGAACAATCCAAAACAGAAAGACACAGACACAACTATGTGATTTCAATTGT
CTAAAGGAGACAGAAAACCAGTGGGGATTCTCTTATCAAGGCTAACATCTCCCCAATGGTTAATGTAACTGTCTTTAAA
ATGTTCCACAAATGCAGATCTAGGATAACAATCTTTCCGTCATGTTTCCTTTTCTTTTTCTTTTCTTTTCTTTTTTTTT
TTTTTTTTCATTTCATCATTGGCAAGAATGAGTGAATTGGATTGACATGGAGGTGAGAGAGGAAGAGAAACAGTCTACA
CGTCAAAATGACAATGTATATTACATGGTTAACAGAATGAGTGGTACGTGCAATGGCTGCGGGTATTTTCATCTGCTGT
GTGTACAATAAGCTCTTTTTTTTCCAAGTATATCATCAAGATCACACTCAATTCAATGCCGATTATGTGTTTGCTTGAA
GGATCTCTTTCTCTGAGTAATATTACTTGATAAACACAGAACTGAAGTAAGAATCTAAGTATTCATTTGTTGCTGTTAC
TGAATCGTGCATATATAGAGGTCATGACTGGTACTCTGACAGTAGTGCTGATCGCAGACCTTAGGGCAGAGTGCGCAGT
GGATTTGAAATATTACAGACCTAGGAAATCAAGCCCTGATTGTAAAGCTGCTTTCCAGTAAGTGAAGAAGTTCAATTAA
AATCTGGGGACCTGCCTCCTGAGAGAAAGTAATTTTACAGGAGCGTACTCAAACTCCTCACCTGGCAACATGAAGAAGC
AAGGCTCACCCAGCAATCCTGCTCCTGTTTTGCCAGCACTGCCAGAACCACTCAAAGATCTGAAAATTAAGTACACTAA
GATATTTATAAACAATGAATGGCATGATTCAGTCAGCGGTAAAAAATTTGAAGTCTTTAACCCCGCAAATGAGGAGAAA
ATCTGTGAGGTTGCAGAAGGTGACAAGGCAGATATAGACAAGGCTGTGAAAGCAGCTAGAAAAGCTTTTGAGCTCGGAT
CACCCTGGCGTACCATGGATGCTTCAGAACGAGGAAGGCTCTTGAACAAACTAGCTGATTTAGTTGAAAGAGATCGACT
GACTTTAGCTACAATGGAAGCTATTGATGGTGGTAAACTCTTTTCTACTGCCTACCTAATGGATTTAGGTGCTTGTATT
AAAACAATACGCTACTGTGCAGGCTGGGCTGATAAAATCCATGGTCGAACTGTTCCAATGGATGGAAACTTTTTCACAT
TTACAAGACATGAGCCTGTTGGTGTGTGTGGACAAATTATTCCTTGGAACTTCCCATTGGTTATGTTTATCTGGAAGAT
CGCCCCTGCACTTTGTTGTGGAAACACAGTGGTTGTCAAACCAGCGGAACAAACACCTCTGAGTGCCCTTTACATGGGA
TCCTTAATTAAAGAGGCAGGATTTCCACCTGGAGTTGTGAATATTGTGCCAGGCTTTGGACCCACCGCTGGAGCAGCAA
TTTCTCACCACATGGACATAGACAAAGTGTCCTTCACAGGCTCTACTGAGGTTGGTAAATTGATCAAAGAAGCAGCAGG
GAAGACCAATCTGAAGAGAGTTACACTGGAACTTGGAGGAAAAAGTCCTAACATTATATTTGCAGATGCAGACTTGGAT
GAAGCTGCGGAATTTGCACACATTGGTCTGTTTTACCACCAAGGGCAGTGTTGTATAGCAGGATCCAGAATTTTTGTGG
AAGAGCCTATTTATGATGAGTTTGTTCGCCGGAGCATTGAACGAGCAAAGAAGTACACTCTTGGGGATCCTCTGTTACC
TGGTGTACAGCAAGGCCCTCAAATTGACAAGGAGCAGTTTCAAAAAATCCTGGATCTCATTGAGAGTGGGAAAAAAGAA
GGAGCCAAGCTGGAATGTGGAGGAGGTCCATGGGGAAACAAGGGTTACTTCATCCAGCCCACGGTTTTTTCTAATGTTA
CGGATGATATGCGCATCGCCAAAGAAGAGATATTTGGACCTGTTCAACAAATCATGAAGTTCAAAACTATAGATGAAGT
TATCAAGAGGGCAAATAACACTACCTATGGCTTAGCAGCAGCAGTTTTTACCAAAGACATTGATAAAGCACTGACATTT
GCATCTGCTCTTCAGGCTGGGACAGTGTGGGTTAATTGTTATAGTGCATTTTCAGCTCAGTGTCCTTTTGGAGGATTTA
AGATGTCAGGAAATGGAAGAGAACTGGGAGAATATGGCCTTCAAGAATACACTGAAGTTAAGACTGTCACAATCAAAAT
CCCACAGAAGAACTCATAATTATGCTTGATGTGCAGAATTTAGCTTCTTCAAATGAATCCGAAAAAAGCTATTTGAATT
C
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 17

Retina

 
25-30
stage 19
stage 22

Retina

 
31-44
stage 44
stage 44

Retina

 
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