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A chicken embryo gene expression database 		 
GEISHA - A Chicken Embryo Gene Expression Database
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Gene Expression Report

Probe 1

GEISHA IdTbx20.Plageman.2005
 NCBIEnsembl
Gene NameTBX20TBX20_CHICK
AliasesTBX20, T-box 20, Official 
Gene DescriptionT-box 20T-box transcription factor TBX20 (T-box protein 20) (cTbx20). [Source:Uniprot/SWISSPROT;Acc:Q8UW76]
Gene Ontologyshow
GO:0003700 transcription factor activity IEA
GO:0005634 nucleus IEA
GO:0006355 regulation of transcription, DNA-dependent IEA
show
GO:0001569 patterning of blood vessels IEA
GO:0001947 heart looping IEA
GO:0003677 DNA binding IEA
GO:0003700 transcription factor activity IEA
GO:0005634 nucleus IEA
GO:0006350 transcription IEA
GO:0006355 regulation of transcription, DNA-dependent IEA
GO:0006936 muscle contraction IEA
GO:0008015 blood circulation IEA
GO:0009953 dorsal/ventral pattern formation IEA
GO:0035050 embryonic heart tube development IEA
NCBI Nucleotide HitNM_204144 show details
scoreevaluealignment lengthdescription
13230.01323Gallus gallus T-box 20 (TBX20), mRNA
Ensembl Genome Map
contig view
CitationPlageman TF, Yutzey KE. T-Box genes and heart development: Putting the "T" in HearT. Dev Dyn. 2005 Jan;232(1):11-20.
CopyrightCopyright © 2005 Wiley-Liss, Inc.
Complete Sequenceshow
ATGGAGTACACACCGCCCCCGAAGCCGCAGCTCTCGTCGCGGGCCAACGCCTTCTCCATCGCCGCCCTCATGTCGAGCG
GCAGCTCCAAGGACAAGGAGGCCGCCGAGAGCACCATCAAGCCTCTGGAGCAATTCGTTGAGAAGTCCTCCTGCGCGCA
GCCTCTGAGCGATCTGTCCGGCCTGGAGCCCCACGGGGACTTCAGCGGCAGCCCCTCGGCCCTGTGTACCGAGCCCCTC
ATCCCCACCACACCCATCATCCCCAGCGAGGAGATGGCCAAAATCTCCTGCAGCCTGGAGACCAAGGAGCTGTGGGACA
AGTTTCACGAGCTGGGCACCGAGATGATCATCACCAAGTCCGGCAGGAGGATGTTTCCCACGATCAGGGTTTCTTTCTC
GGGAGTGGATCCTGAAGCCAAGTACATCGTGCTAATGGATATCGTTCCGGTGGACAATAAGAGATACAGATATGCCTAC
CACCGCTCCTCCTGGCTGGTGGCTGGCAAAGCCGACCCTCCTCTCCCAGCAAGGCTCTACGTGCACCCCGACTCCCCGT
TCACGGGTGAGCAGTTGATGAAGCAGATGGTGTCGTTCGAGAAAGTGAAGCTCACGAACAACGAGCTGGATCAGCATGG
CCACATCATTTTAAACTCCATGCACAAGTACCAGCCAAGAGTCCACATCATTAAGAAGAAAGATCACACGGCTTCTTTG
TTAAATCTGAAATCTGAAGAGTTCAGGACGTTTATCTTTCCAGAGACAGTTTTTACTGCTGTCACAGCCTACCAGAATC
AATTGATAACCAAGTTGAAAATTGACAGCAACCCTTTTGCCAAAGGATTCCGCGACTCTTCCAGACTCACTGATATCGA
GAGGGAAAGTGTGGAGAGCCTTATCCAAAAGCATTCCTACGCCCGATCCCCGATTCGAACCTATGGTGGAGAAGATGAT
CTTGGAGATGACAGCCAGGCAACGCAAAGCAGAGGATCAGCTTTTACAACATCTGATAACCTGTCCCTCAGTTCCTGGG
TATCCTCTTCAACCAGTTTTCCTGGATTTCAGCATCCCCAGTCTTTGAGTGCCCTGGGTACCAGCACTGCATCCATTGC
TACACCTATTCCTCATCCAATCCAAGGATCCTTGCCTCCATACAGCCGCTTGGGAATGCCTCTTACGCCCTCTGCAATA
GCCAGCTCCATGCAAGGTACTGGCCCCACTTTCCCTTCTTTCCACATGCCAAGGTACCATCATTATTTTCAGCAGGGTC
CTTATGCAGCCATCCAGGGACTGCGTCACTCCTCCGCAGTAATGACACCATTCGTATAG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-36
stage 36

Atria

Heart

primordia of the tricuspid and mitral valves

Probe 2

GEISHA IdTbx20.Lincoln.2004
 NCBIEnsembl
Gene NameTBX20TBX20_CHICK
AliasesTBX20, T-box 20, Official 
Gene DescriptionT-box 20T-box transcription factor TBX20 (T-box protein 20) (cTbx20). [Source:Uniprot/SWISSPROT;Acc:Q8UW76]
Gene Ontologyshow
GO:0003700 transcription factor activity IEA
GO:0005634 nucleus IEA
GO:0006355 regulation of transcription, DNA-dependent IEA
show
GO:0001569 patterning of blood vessels IEA
GO:0001947 heart looping IEA
GO:0003677 DNA binding IEA
GO:0003700 transcription factor activity IEA
GO:0005634 nucleus IEA
GO:0006350 transcription IEA
GO:0006355 regulation of transcription, DNA-dependent IEA
GO:0006936 muscle contraction IEA
GO:0008015 blood circulation IEA
GO:0009953 dorsal/ventral pattern formation IEA
GO:0035050 embryonic heart tube development IEA
NCBI Nucleotide HitNM_204144 show details
scoreevaluealignment lengthdescription
8150.0815Gallus gallus T-box 20 (TBX20), mRNA
Ensembl Genome Map
contig view
CitationLincoln J, Alfieri CM, Yutzey KE. Development of heart valve leaflets and supporting apparatus in chicken and mouse embryos. Dev Dyn. 2004 Jun;230(2):239-50.
CopyrightWiley-Liss, Inc. 2004
Complete Sequenceshow
GTGGACAATAAGAGATACAGATATGCCTACCACCGCTCCTCCTGGCTGGTGGCTGGCAAAGCCGACCCTCCTCTCCCAG
CAAGGCTCTACGTGCACCCCGACTCCCCGTTCACGGGTGAGCAGTTGATGAAGCAGATGGTGTCGTTCGAGAAAGTGAA
GCTCACGAACAACGAGCTGGATCAGCATGGCCACATCATTTTAAACTCCATGCACAAGTACCAGCCAAGAGTCCACATC
ATTAAGAAGAAAGATCACACGGCTTCTTTGTTAAATCTGAAATCTGAAGAGTTCAGGACGTTTATCTTTCCAGAGACAG
TTTTTACTGCTGTCACAGCCTACCAGAATCAATTGATAACCAAGTTGAAAATTGACAGCAACCCTTTTGCCAAAGGATT
CCGCGACTCTTCCAGACTCACTGATATCGAGAGGGAAAGTGTGGAGAGCCTTATCCAAAAGCATTCCTACGCCCGATCC
CCGATTCGAACCTATGGTGGAGAAGATGATCTTGGAGATGACAGCCAGGCAACGCAAAGCAGAGGATCAGCTTTTACAA
CATCTGATAACCTGTCCCTCAGTTCCTGGGTATCCTCTTCAACCAGTTTTCCTGGATTTCAGCATCCCCAGTCTTTGAG
TGCCCTGGGTACCAGCACTGCATCCATTGCTACACCTATTCCTCATCCAATCCAAGGATCCTTGCCTCCATACAGCCGC
TTGGGAATGCCTCTTACGCCCTCTGCAATAGCCAGCTCCATGCAAGGTACTGGCCCCACTTTCCCTTCTTTCCACATGC
CAAGGTACCATCATTATTTTCAGCA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 29

Heart

 
31-36
stage 36

Heart

 

Probe 3

GEISHA IdTbx20.Yamagishi.2004
 NCBIEnsembl
Gene NameTBX20TBX20_CHICK
AliasesTBX20, T-box 20, Official 
Gene DescriptionT-box 20T-box transcription factor TBX20 (T-box protein 20) (cTbx20). [Source:Uniprot/SWISSPROT;Acc:Q8UW76]
Gene Ontologyshow
GO:0003700 transcription factor activity IEA
GO:0005634 nucleus IEA
GO:0006355 regulation of transcription, DNA-dependent IEA
show
GO:0001569 patterning of blood vessels IEA
GO:0001947 heart looping IEA
GO:0003677 DNA binding IEA
GO:0003700 transcription factor activity IEA
GO:0005634 nucleus IEA
GO:0006350 transcription IEA
GO:0006355 regulation of transcription, DNA-dependent IEA
GO:0006936 muscle contraction IEA
GO:0008015 blood circulation IEA
GO:0009953 dorsal/ventral pattern formation IEA
GO:0035050 embryonic heart tube development IEA
NCBI Nucleotide HitNM_204144 show details
scoreevaluealignment lengthdescription
13230.01323Gallus gallus T-box 20 (TBX20), mRNA
Ensembl Genome Map
contig view
CitationYamagishi T, Nakajima Y, Nishimatsu S, Nohno T, Ando K, Nakamura H. Expression of tbx20 RNA During Chick Heart Development. Dev Dyn. 2004 Jul;230(3):576-80.
CopyrightCopyright © 2004 Wiley-Liss, Inc., A Wiley Company
Complete Sequenceshow
ATGGAGTACACACCGCCCCCGAAGCCGCAGCTCTCGTCGCGGGCCAACGCCTTCTCCATCGCCGCCCTCATGTCGAGCG
GCAGCTCCAAGGACAAGGAGGCCGCCGAGAGCACCATCAAGCCTCTGGAGCAATTCGTTGAGAAGTCCTCCTGCGCGCA
GCCTCTGAGCGATCTGTCCGGCCTGGAGCCCCACGGGGACTTCAGCGGCAGCCCCTCGGCCCTGTGTACCGAGCCCCTC
ATCCCCACCACACCCATCATCCCCAGCGAGGAGATGGCCAAAATCTCCTGCAGCCTGGAGACCAAGGAGCTGTGGGACA
AGTTTCACGAGCTGGGCACCGAGATGATCATCACCAAGTCCGGCAGGAGGATGTTTCCCACGATCAGGGTTTCTTTCTC
GGGAGTGGATCCTGAAGCCAAGTACATCGTGCTAATGGATATCGTTCCGGTGGACAATAAGAGATACAGATATGCCTAC
CACCGCTCCTCCTGGCTGGTGGCTGGCAAAGCCGACCCTCCTCTCCCAGCAAGGCTCTACGTGCACCCCGACTCCCCGT
TCACGGGTGAGCAGTTGATGAAGCAGATGGTGTCGTTCGAGAAAGTGAAGCTCACGAACAACGAGCTGGATCAGCATGG
CCACATCATTTTAAACTCCATGCACAAGTACCAGCCAAGAGTCCACATCATTAAGAAGAAAGATCACACGGCTTCTTTG
TTAAATCTGAAATCTGAAGAGTTCAGGACGTTTATCTTTCCAGAGACAGTTTTTACTGCTGTCACAGCCTACCAGAATC
AATTGATAACCAAGTTGAAAATTGACAGCAACCCTTTTGCCAAAGGATTCCGCGACTCTTCCAGACTCACTGATATCGA
GAGGGAAAGTGTGGAGAGCCTTATCCAAAAGCATTCCTACGCCCGATCCCCGATTCGAACCTATGGTGGAGAAGATGAT
CTTGGAGATGACAGCCAGGCAACGCAAAGCAGAGGATCAGCTTTTACAACATCTGATAACCTGTCCCTCAGTTCCTGGG
TATCCTCTTCAACCAGTTTTCCTGGATTTCAGCATCCCCAGTCTTTGAGTGCCCTGGGTACCAGCACTGCATCCATTGC
TACACCTATTCCTCATCCAATCCAAGGATCCTTGCCTCCATACAGCCGCTTGGGAATGCCTCTTACGCCCTCTGCAATA
GCCAGCTCCATGCAAGGTACTGGCCCCACTTTCCCTTCTTTCCACATGCCAAGGTACCATCATTATTTTCAGCAGGGTC
CTTATGCAGCCATCCAGGGACTGCGTCACTCCTCCGCAGTAATGACACCATTCGTATAG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
stage 5

Lateral Plate Mesoderm

Mesoderm, early

 
7-12
stage 8
stage 8
stage 10
stage 10
stage 12

Atria

Heart Tube

Lateral Plate Mesoderm

Myocardium

Outflow Tract

Splanchnic Mesoderm

 
13-18
stage 14
stage 14
stage 14
stage 18
stage 18
stage 18

Atria

Endocardium

Heart

Heart Tube

Myocardium

Outflow Tract

Valves

Ventricles

 
19-24
stage 23
stage 23
stage 23

Atria

Endocardium

Epicardium

Myocardium

Outflow Tract

Valves

Ventricles

 
25-30
stage 27
stage 27
stage 27
stage 27
stage 30
stage 30

Atria

Endocardium

Epicardium

Heart

Myocardium

Outflow Tract

Valves

Ventricles

 
31-33
stage 33
stage 33

Atria

Endocardium

Epicardium

Myocardium

Valves

Ventricles

 
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