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A chicken embryo gene expression database 		 
GEISHA - A Chicken Embryo Gene Expression Database
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Gene Expression Report

Probe 1

GEISHA IdGata4.Lincoln.2004
 NCBIEnsembl
Gene NameGATA4GATA4_CHICK
AliasesGATA-4, GATA-4 transcription factor, GATA4, GATA binding protein 4, Official 
Gene DescriptionGATA binding protein 4Transcription factor GATA-4 (GATA-binding factor 4) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P43691]
Gene Ontologyshow
GO:0003700 transcription factor activity IEA
GO:0005634 nucleus IEA
GO:0006355 regulation of transcription, DNA-dependent IEA
GO:0008270 zinc ion binding IEA
GO:0016563 transcription activator activity IEA
GO:0043565 sequence-specific DNA binding IEA
GO:0045941 positive regulation of transcription IEA
GO:0046872 metal ion binding IEA
show
GO:0001701 in utero embryonic development IEA
GO:0001702 gastrulation with mouth forming second IEA
GO:0003677 DNA binding IEA
GO:0003700 transcription factor activity IEA
GO:0003702 RNA polymerase II transcription factor activity IEA
GO:0003704 specific RNA polymerase II transcription factor activity IEA
GO:0005515 protein binding IEA
GO:0005634 nucleus IEA
GO:0006350 transcription IEA
GO:0006355 regulation of transcription, DNA-dependent IEA
GO:0006357 regulation of transcription from RNA polymerase II promoter IEA
GO:0007267 cell-cell signaling IEA
GO:0007507 heart development IEA
GO:0008270 zinc ion binding IEA
GO:0016563 transcription activator activity IEA
GO:0035050 embryonic heart tube development IEA
GO:0035054 embryonic heart tube anterior/posterior pattern formation IEA
GO:0043565 sequence-specific DNA binding IEA
GO:0045893 positive regulation of transcription, DNA-dependent IEA
GO:0045941 positive regulation of transcription IEA
GO:0045944 positive regulation of transcription from RNA polymerase II promoter IEA
GO:0046872 metal ion binding IEA
GO:0048558 embryonic gut morphogenesis IEA
GO:0048598 embryonic morphogenesis IEA
GO:0048617 embryonic foregut morphogenesis IEA
NCBI Nucleotide HitXM_420041 show details
scoreevaluealignment lengthdescription
15410.01541PREDICTED: Gallus gallus GATA binding protein 4 (GATA4), mRNA
Ensembl Genome Map
contig view
CitationLincoln J, Alfieri CM, Yutzey KE. Development of heart valve leaflets and supporting apparatus in chicken and mouse embryos. Dev Dyn. 2004 Jun;230(2):239-50.
CopyrightWiley-Liss, Inc. 2004
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # XM_420041).
Complete Sequenceshow
ATGTACCAGAGCTTAGCCATGGCGGCGAACCCCGGCCCCCCGTCCTACGAAGGGGCAGGTGGCTTCATGCACGGCGCCG
CTGCCGCGTCCCCCGTCTACGTGCCCACCACCAGGGTCCCCTCCATGCTCCCCAGCCTGCCCTACCTGCCCAGCAGCGG
CTCTTCCCAGCAAGCCAGCCCCGTCTCCAGCCACTCCATCTGGACTCAACCTGGAGCCGAAAGCGCCGCATACAACCCC
GGATCTTCCCACCCGCCCGTGTCACCTCGCTTCTCCTTCTCCACCAGCACTCCCATCCCCTCCACCTCATCGCGGGATG
CCGCGGCGGCTTACAGCAGCTCCCTGAGCCTTTCTGCTAACGGGAGGGAGCAATACAGCCGGGGCTTCGGCAGCTCCTA
CTCCAGCCCTTACCCGGCGTACGTGAGCCCTGAAATGGCCACCACTTGGACTTCTTCGCCCTTCGACAGCCCCATGCTG
CACAACCTGCAGAGCAGAGGGACACCCGCAGCCGCCCGGCATGCCAACATCGAATTTTTTGATGATTATTCAGAAGGGC
GAGAATGTGTCAACTGTGGGGCCATGTCCACCCCGCTCTGGAGGAGAGATGGCACAGGGCACTACCTCTGCAATGCCTG
TGGGCTCTATCACAAGATGAACGGCATCAACCGGCCCTTGTTCAAACCTCAGCGGAGGCTGTCGGCTTCCCGTCGCGTC
GGCCTCTCTTGTGCCAACTGCCACACGACCACAACCACACTCTGGCGCAGAAACGCCGAGGGAGAGCCCGTCTGTAATG
CCTGTGGACTCTACATGAAGCTTCATGGGGTTCCAAGGCCATTAGCAATGAGAAAAGAGGGCATTCAGACAAGGAAGCG
TAAGCCGAAGAACCTTAACAAAACAAAGACGCCAGCAGGTCCATCCAGCAGTGAGAGTCTTACCCCGACCACGAGCTCC
ACGAGTAGCAGCAGCAGTGCCACGACCACTGAGGAAATGCGCCCCATCAAAACAGAACCAGGGCTCTCATCTCATTATG
GGCACCCCAGCCCAATTTCTCAGGCATTCTCGGTCTCTGCCATGTCTGGACATGGATCTTCAATTCATCCTGCAATTTC
AGCCCTGAAGCTTTCCCCGCAGGCTTACCAGTCAGCCATCAGCCAGTCTCCACAAGCCAGCTCCAAACAGGACTCCTGG
AACAGCCTGGTCTTAGCTGAAAACCATGGGGACATCATAACGGCATAAACTGGTCTTCCACCCATAGACTTGAGGCTGA
TCCACTGGAGAGATGAAGAAGATGCCACGTAATAATCATGTCGATGTTGTTTCCCTCCTCCCCTGCTCTCCTGCCATGT
TCCAACATGTTGGATGTTCCAACATCCGAGATGCTCCAACAAAGAGGTAAAGAGGACTTACGTGAAGTGTAGGAGAGCT
CTTACCAAACAAACCAAGAAGACTCAAATCTCAAAGTAACTAATGGATTTGAAACATTTTTCCTCCCTTCAAACAAGTT
TCCTTGTATTTGATTGTCACTACCTTCTAAGAAATAGCCA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 29

Heart

 
31-36
stage 36

Heart

 

Probe 2

GEISHA IdGata4.Ghatpande.2006
 NCBIEnsembl
Gene NameGATA4GATA4_CHICK
AliasesGATA-4, GATA-4 transcription factor, GATA4, GATA binding protein 4, Official 
Gene DescriptionGATA binding protein 4Transcription factor GATA-4 (GATA-binding factor 4) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P43691]
Gene Ontologyshow
GO:0003700 transcription factor activity IEA
GO:0005634 nucleus IEA
GO:0006355 regulation of transcription, DNA-dependent IEA
GO:0008270 zinc ion binding IEA
GO:0016563 transcription activator activity IEA
GO:0043565 sequence-specific DNA binding IEA
GO:0045941 positive regulation of transcription IEA
GO:0046872 metal ion binding IEA
show
GO:0001701 in utero embryonic development IEA
GO:0001702 gastrulation with mouth forming second IEA
GO:0003677 DNA binding IEA
GO:0003700 transcription factor activity IEA
GO:0003702 RNA polymerase II transcription factor activity IEA
GO:0003704 specific RNA polymerase II transcription factor activity IEA
GO:0005515 protein binding IEA
GO:0005634 nucleus IEA
GO:0006350 transcription IEA
GO:0006355 regulation of transcription, DNA-dependent IEA
GO:0006357 regulation of transcription from RNA polymerase II promoter IEA
GO:0007267 cell-cell signaling IEA
GO:0007507 heart development IEA
GO:0008270 zinc ion binding IEA
GO:0016563 transcription activator activity IEA
GO:0035050 embryonic heart tube development IEA
GO:0035054 embryonic heart tube anterior/posterior pattern formation IEA
GO:0043565 sequence-specific DNA binding IEA
GO:0045893 positive regulation of transcription, DNA-dependent IEA
GO:0045941 positive regulation of transcription IEA
GO:0045944 positive regulation of transcription from RNA polymerase II promoter IEA
GO:0046872 metal ion binding IEA
GO:0048558 embryonic gut morphogenesis IEA
GO:0048598 embryonic morphogenesis IEA
GO:0048617 embryonic foregut morphogenesis IEA
NCBI Nucleotide HitXM_420041 show details
scoreevaluealignment lengthdescription
15400.01540PREDICTED: Gallus gallus GATA binding protein 4 (GATA4), mRNA
Ensembl Genome Map
contig view
CitationGhatpande S, Brand T, Zile M, Evans T. Bmp2 and Gata4 function additively to rescue heart tube development in the absence of retinoids. Dev Dyn. 2006 Aug;235(8):2030-9.
CopyrightCopyright © 2006 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_420041).
Complete Sequenceshow
ATGTACCAGAGCTTAGCCATGGCGGCGAACCCCGGCCCCCCGTCCTACGAAGGGGCAGGTGGCTTCATGCACGGCGCCG
CTGCCGCGTCCCCCGTCTACGTGCCCACCACCAGGGTCCCCTCCATGCTCCCCAGCCTGCCCTACCTGCCCAGCAGCGG
CTCTTCCCAGCAAGCCAGCCCCGTCTCCAGCCACTCCATCTGGACTCAACCTGGAGCCGAAAGCGCCGCATACAACCCC
GGATCTTCCCACCCGCCCGTGTCACCTCGCTTCTCCTTCTCCACCAGCACTCCCATCCCCTCCACCTCATCGCGGGATG
CCGCGGCGGCTTACAGCAGCTCCCTGAGCCTTTCTGCTAACGGGAGGGAGCAATACAGCCGGGGCTTCGGCAGCTCCTA
CTCCAGCCCTTACCCGGCGTACGTGAGCCCTGAAATGGCCACCACTTGGACTTCTTCGCCCTTCGACAGCCCCATGCTG
CACAACCTGCAGAGCAGAGGGACACCCGCAGCCGCCCGGCATGCCAACATCGAATTTTTTGATGATTATTCAGAAGGGC
GAGAATGTGTCAACTGTGGGGCCATGTCCACCCCGCTCTGGAGGAGAGATGGCACAGGGCACTACCTCTGCAATGCCTG
TGGGCTCTATCACAAGATGAACGGCATCAACCGGCCCTTGTTCAAACCTCAGCGGAGGCTGTCGGCTTCCCGTCGCGTC
GGCCTCTCTTGTGCCAACTGCCACACGACCACAACCACACTCTGGCGCAGAAACGCCGAGGGAGAGCCCGTCTGTAATG
CCTGTGGACTCTACATGAAGCTTCATGGGGTTCCAAGGCCATTAGCAATGAGAAAAGAGGGCATTCAGACAAGGAAGCG
TAAGCCGAAGAACCTTAACAAAACAAAGACGCCAGCAGGTCCATCCAGCAGTGAGAGTCTTACCCCGACCACGAGCTCC
ACGAGTAGCAGCAGCAGTGCCACGACCACTGAGGAAATGCGCCCCATCAAAACAGAACCAGGGCTCTCATCTCATTATG
GGCACCCCAGCCCAATTTCTCAGGCATTCTCGGTCTCTGCCATGTCTGGACATGGATCTTCAATTCATCCTGCAATTTC
AGCCCTGAAGCTTTCCCCGCAGGCTTACCAGTCAGCCATCAGCCAGTCTCCACAAGCCAGCTCCAAACAGGACTCCTGG
AACAGCCTGGTCTTAGCTGAAAACCATGGGGACATCATAACGGCATAAACTGGTCTTCCACCCATAGACTTGAGGCTGA
TCCACTGGAGAGATGAAGAAGATGCCACGTAATAATCATGTCGATGTTGTTTCCCTCCTCCCCTGCTCTCCTGCCATGT
TCCAACATGTTGGATGTTCCAACATCCGAGATGCTCCAACAAAGAGGTAAAGAGGACTTACGTGAAGTGTAGGAGAGCT
CTTACCAAACAAACCAAGAAGACTCAAATCTCAAAGTAACTAATGGATTTGAAACATTTTTCCTCCCTTCAAACAAGTT
TCCTTGTATTTGATTGTCACTACCTTCTAAGAAATAGCC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-11
stage 8
stage 11

Anterior Intestinal Portal

Heart

Lateral Plate Mesoderm

 

Probe 3

GEISHA IdGata4.Shin.2006
 NCBIEnsembl
Gene NameGATA4GATA4_CHICK
AliasesGATA-4, GATA-4 transcription factor, GATA4, GATA binding protein 4, Official 
Gene DescriptionGATA binding protein 4Transcription factor GATA-4 (GATA-binding factor 4) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P43691]
Gene Ontologyshow
GO:0003700 transcription factor activity IEA
GO:0005634 nucleus IEA
GO:0006355 regulation of transcription, DNA-dependent IEA
GO:0008270 zinc ion binding IEA
GO:0016563 transcription activator activity IEA
GO:0043565 sequence-specific DNA binding IEA
GO:0045941 positive regulation of transcription IEA
GO:0046872 metal ion binding IEA
show
GO:0001701 in utero embryonic development IEA
GO:0001702 gastrulation with mouth forming second IEA
GO:0003677 DNA binding IEA
GO:0003700 transcription factor activity IEA
GO:0003702 RNA polymerase II transcription factor activity IEA
GO:0003704 specific RNA polymerase II transcription factor activity IEA
GO:0005515 protein binding IEA
GO:0005634 nucleus IEA
GO:0006350 transcription IEA
GO:0006355 regulation of transcription, DNA-dependent IEA
GO:0006357 regulation of transcription from RNA polymerase II promoter IEA
GO:0007267 cell-cell signaling IEA
GO:0007507 heart development IEA
GO:0008270 zinc ion binding IEA
GO:0016563 transcription activator activity IEA
GO:0035050 embryonic heart tube development IEA
GO:0035054 embryonic heart tube anterior/posterior pattern formation IEA
GO:0043565 sequence-specific DNA binding IEA
GO:0045893 positive regulation of transcription, DNA-dependent IEA
GO:0045941 positive regulation of transcription IEA
GO:0045944 positive regulation of transcription from RNA polymerase II promoter IEA
GO:0046872 metal ion binding IEA
GO:0048558 embryonic gut morphogenesis IEA
GO:0048598 embryonic morphogenesis IEA
GO:0048617 embryonic foregut morphogenesis IEA
NCBI Nucleotide HitXM_420041 show details
scoreevaluealignment lengthdescription
8570.0881PREDICTED: Gallus gallus GATA binding protein 4 (GATA4), mRNA
Ensembl Genome Map
contig view
CitationShin M, Noji S, Neubüser A, Yasugi S. FGF10 is required for cell proliferation and gland formation in the stomach epithelium of the chicken embryo. Dev Biol. 2006 Jun 1;294(1):11-23. Epub 2006 Apr 17.
CopyrightReprinted from Developmental Biology, 294, Masahiron Shin, Sumihare Noji, Annette Neubüser, and Sadao Yasugl, 11-23, Copyright 2006, with permission from Elsevier. Copyright © 2005 Elsevier Inc. All rights reserved.
CommentsAccording to the authors, "Probes were derived from cDNA fragments of ... ... cGata4 (ChEST207P4; Shin et al., 2005).
Complete Sequenceshow
CACACCGGCCCTTGTTCAAACCTCAGCGGAGGCTGTCGGCTTCCCGTCGCGTCGGCCTCTCTTGTGCCAACTGCCACAC
GACCACAACCACACTCTGGCGCAGAAACGCCGAGGGAGAGCCCGTCTGTAATGCCTGTGGACTCTACATGAAGCTTCAT
GGGGTTCCAAGGCCATTAGCAATGAGAAAAGAGGGCATTCAGACAAGGAAGCGTAAGCCGAAGAACCTTAACAAAACAA
AGACGCCAGCAGGTCCATCCAGCAGTGAGAGTCTTACCCCGACCACGAGCTCCACGAGTAGCAGCAGCAGTGCCACGAC
CACTGAGGAAATGCGCCCCATCAAAACAGAACCAGGGCTCTCATCTCATTATGGGCACCCCAGCCCAATTTCTCAGGCA
TTCTCGGTCTCTGCCATGTCTGGACATGGATCTTCAATTCATCCTGCAATTTCAGCCCTGAAGCTTTCCCCGCAGGCTT
ACCAGTCAGCCATCAGCCAGTCTCCACAAGCCAGCTCCAAACAGGACTCCTGGAACAGCCTGGTCTTAGCTGAAAACCA
TGGGGACATCATAACGGCATAAACTGGTCTTCCACCCATAGACTTGAGGCTGATCCACTGGAGAGATGAAGAAGATGCC
ACGTAATAATCATGTCGATGTTGTTTCCCTCCTCCCCTGCTCTCCTGCCATGTTCCAACATGTTGGATGTTCCAACATC
CGAGATGCTCCAACAAAGAGGTAAAGAGGACTTACGTGAACGTGAAGGAGAGCTCTTACCAAAAAAACCAAGAAGACTC
AAATCTCAAAGTAACTCATGGATTTGAAACATTTTTCCTCCCTTCAAACAAGTTTCCCTGTATTTGATTGTCACTACCT
TCTAAGAAATAGCCAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-38
stage 32
stage 36
stage 37
stage 38

Stomach

Proventriculus

Probe 4

GEISHA IdGata4.Shin.2005
 NCBIEnsembl
Gene NameGATA4GATA4_CHICK
AliasesGATA-4, GATA-4 transcription factor, GATA4, GATA binding protein 4, Official 
Gene DescriptionGATA binding protein 4Transcription factor GATA-4 (GATA-binding factor 4) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P43691]
Gene Ontologyshow
GO:0003700 transcription factor activity IEA
GO:0005634 nucleus IEA
GO:0006355 regulation of transcription, DNA-dependent IEA
GO:0008270 zinc ion binding IEA
GO:0016563 transcription activator activity IEA
GO:0043565 sequence-specific DNA binding IEA
GO:0045941 positive regulation of transcription IEA
GO:0046872 metal ion binding IEA
show
GO:0001701 in utero embryonic development IEA
GO:0001702 gastrulation with mouth forming second IEA
GO:0003677 DNA binding IEA
GO:0003700 transcription factor activity IEA
GO:0003702 RNA polymerase II transcription factor activity IEA
GO:0003704 specific RNA polymerase II transcription factor activity IEA
GO:0005515 protein binding IEA
GO:0005634 nucleus IEA
GO:0006350 transcription IEA
GO:0006355 regulation of transcription, DNA-dependent IEA
GO:0006357 regulation of transcription from RNA polymerase II promoter IEA
GO:0007267 cell-cell signaling IEA
GO:0007507 heart development IEA
GO:0008270 zinc ion binding IEA
GO:0016563 transcription activator activity IEA
GO:0035050 embryonic heart tube development IEA
GO:0035054 embryonic heart tube anterior/posterior pattern formation IEA
GO:0043565 sequence-specific DNA binding IEA
GO:0045893 positive regulation of transcription, DNA-dependent IEA
GO:0045941 positive regulation of transcription IEA
GO:0045944 positive regulation of transcription from RNA polymerase II promoter IEA
GO:0046872 metal ion binding IEA
GO:0048558 embryonic gut morphogenesis IEA
GO:0048598 embryonic morphogenesis IEA
GO:0048617 embryonic foregut morphogenesis IEA
NCBI Nucleotide HitXM_420041 show details
scoreevaluealignment lengthdescription
15410.01541PREDICTED: Gallus gallus GATA binding protein 4 (GATA4), mRNA
Ensembl Genome Map
contig view
CitationShin M, Watanuki K, Yasugi S (2005). Expression of Fgf10 and Fgf receptors during development of the embryonic chicken stomach. Gene Expr Patterns. 2005 Apr;5(4):511-6.
CopyrightCopyright © 2004 Elsevier B.V. All rights reserved.
CommentsAccording to authors , "cGata4 (a gift from Dr T. Nohno; Ohuchi et al., 1997). As information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # XM_420041).
Complete Sequenceshow
ATGTACCAGAGCTTAGCCATGGCGGCGAACCCCGGCCCCCCGTCCTACGAAGGGGCAGGTGGCTTCATGCACGGCGCCG
CTGCCGCGTCCCCCGTCTACGTGCCCACCACCAGGGTCCCCTCCATGCTCCCCAGCCTGCCCTACCTGCCCAGCAGCGG
CTCTTCCCAGCAAGCCAGCCCCGTCTCCAGCCACTCCATCTGGACTCAACCTGGAGCCGAAAGCGCCGCATACAACCCC
GGATCTTCCCACCCGCCCGTGTCACCTCGCTTCTCCTTCTCCACCAGCACTCCCATCCCCTCCACCTCATCGCGGGATG
CCGCGGCGGCTTACAGCAGCTCCCTGAGCCTTTCTGCTAACGGGAGGGAGCAATACAGCCGGGGCTTCGGCAGCTCCTA
CTCCAGCCCTTACCCGGCGTACGTGAGCCCTGAAATGGCCACCACTTGGACTTCTTCGCCCTTCGACAGCCCCATGCTG
CACAACCTGCAGAGCAGAGGGACACCCGCAGCCGCCCGGCATGCCAACATCGAATTTTTTGATGATTATTCAGAAGGGC
GAGAATGTGTCAACTGTGGGGCCATGTCCACCCCGCTCTGGAGGAGAGATGGCACAGGGCACTACCTCTGCAATGCCTG
TGGGCTCTATCACAAGATGAACGGCATCAACCGGCCCTTGTTCAAACCTCAGCGGAGGCTGTCGGCTTCCCGTCGCGTC
GGCCTCTCTTGTGCCAACTGCCACACGACCACAACCACACTCTGGCGCAGAAACGCCGAGGGAGAGCCCGTCTGTAATG
CCTGTGGACTCTACATGAAGCTTCATGGGGTTCCAAGGCCATTAGCAATGAGAAAAGAGGGCATTCAGACAAGGAAGCG
TAAGCCGAAGAACCTTAACAAAACAAAGACGCCAGCAGGTCCATCCAGCAGTGAGAGTCTTACCCCGACCACGAGCTCC
ACGAGTAGCAGCAGCAGTGCCACGACCACTGAGGAAATGCGCCCCATCAAAACAGAACCAGGGCTCTCATCTCATTATG
GGCACCCCAGCCCAATTTCTCAGGCATTCTCGGTCTCTGCCATGTCTGGACATGGATCTTCAATTCATCCTGCAATTTC
AGCCCTGAAGCTTTCCCCGCAGGCTTACCAGTCAGCCATCAGCCAGTCTCCACAAGCCAGCTCCAAACAGGACTCCTGG
AACAGCCTGGTCTTAGCTGAAAACCATGGGGACATCATAACGGCATAAACTGGTCTTCCACCCATAGACTTGAGGCTGA
TCCACTGGAGAGATGAAGAAGATGCCACGTAATAATCATGTCGATGTTGTTTCCCTCCTCCCCTGCTCTCCTGCCATGT
TCCAACATGTTGGATGTTCCAACATCCGAGATGCTCCAACAAAGAGGTAAAGAGGACTTACGTGAAGTGTAGGAGAGCT
CTTACCAAACAAACCAAGAAGACTCAAATCTCAAAGTAACTAATGGATTTGAAACATTTTTCCTCCCTTCAAACAAGTT
TCCTTGTATTTGATTGTCACTACCTTCTAAGAAATAGCCA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 27
stage 29
stage 30

Stomach

Unlabeled

Proventriculus

31-44
stage 36
stage 39
stage 44
stage 44

Gizzard

Gut

Stomach

Trunk Mesenchyme

Comparison of several genes

Comparison with several genes

Proventriculus

Probe 5

GEISHA IdGATA4.Liberatore.2000
 NCBIEnsembl
Gene NameGATA4GATA4_CHICK
AliasesGATA-4, GATA-4 transcription factor, GATA4, GATA binding protein 4, Official 
Gene DescriptionGATA binding protein 4Transcription factor GATA-4 (GATA-binding factor 4) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P43691]
Gene Ontologyshow
GO:0003700 transcription factor activity IEA
GO:0005634 nucleus IEA
GO:0006355 regulation of transcription, DNA-dependent IEA
GO:0008270 zinc ion binding IEA
GO:0016563 transcription activator activity IEA
GO:0043565 sequence-specific DNA binding IEA
GO:0045941 positive regulation of transcription IEA
GO:0046872 metal ion binding IEA
show
GO:0001701 in utero embryonic development IEA
GO:0001702 gastrulation with mouth forming second IEA
GO:0003677 DNA binding IEA
GO:0003700 transcription factor activity IEA
GO:0003702 RNA polymerase II transcription factor activity IEA
GO:0003704 specific RNA polymerase II transcription factor activity IEA
GO:0005515 protein binding IEA
GO:0005634 nucleus IEA
GO:0006350 transcription IEA
GO:0006355 regulation of transcription, DNA-dependent IEA
GO:0006357 regulation of transcription from RNA polymerase II promoter IEA
GO:0007267 cell-cell signaling IEA
GO:0007507 heart development IEA
GO:0008270 zinc ion binding IEA
GO:0016563 transcription activator activity IEA
GO:0035050 embryonic heart tube development IEA
GO:0035054 embryonic heart tube anterior/posterior pattern formation IEA
GO:0043565 sequence-specific DNA binding IEA
GO:0045893 positive regulation of transcription, DNA-dependent IEA
GO:0045941 positive regulation of transcription IEA
GO:0045944 positive regulation of transcription from RNA polymerase II promoter IEA
GO:0046872 metal ion binding IEA
GO:0048558 embryonic gut morphogenesis IEA
GO:0048598 embryonic morphogenesis IEA
GO:0048617 embryonic foregut morphogenesis IEA
NCBI Nucleotide HitXM_420041 show details
scoreevaluealignment lengthdescription
8570.0881PREDICTED: Gallus gallus GATA binding protein 4 (GATA4), mRNA
Ensembl Genome Map
contig view
CitationLiberatore CM, Searcy-Schrick RD, Yutzey KE. Ventricular expression of tbx5 inhibits normal heart chamber development. Dev Biol. 2000 Jul 1;223(1):169-80.
CopyrightReprinted with permission from Elsevier. Copyright © date Elsevier B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_420041).
Complete Sequenceshow
ATGTACCAGAGCTTAGCCATGGCGGCGAACCCCGGCCCCCCGTCCTACGAAGGGGCAGGTGGCTTCATGCACGGCGCCG
CTGCCGCGTCCCCCGTCTACGTGCCCACCACCAGGGTCCCCTCCATGCTCCCCAGCCTGCCCTACCTGCCCAGCAGCGG
CTCTTCCCAGCAAGCCAGCCCCGTCTCCAGCCACTCCATCTGGACTCAACCTGGAGCCGAAAGCGCCGCATACAACCCC
GGATCTTCCCACCCGCCCGTGTCACCTCGCTTCTCCTTCTCCACCAGCACTCCCATCCCCTCCACCTCATCGCGGGATG
CCGCGGCGGCTTACAGCAGCTCCCTGAGCCTTTCTGCTAACGGGAGGGAGCAATACAGCCGGGGCTTCGGCAGCTCCTA
CTCCAGCCCTTACCCGGCGTACGTGAGCCCTGAAATGGCCACCACTTGGACTTCTTCGCCCTTCGACAGCCCCATGCTG
CACAACCTGCAGAGCAGAGGGACACCCGCAGCCGCCCGGCATGCCAACATCGAATTTTTTGATGATTATTCAGAAGGGC
GAGAATGTGTCAACTGTGGGGCCATGTCCACCCCGCTCTGGAGGAGAGATGGCACAGGGCACTACCTCTGCAATGCCTG
TGGGCTCTATCACAAGATGAACGGCATCAACCGGCCCTTGTTCAAACCTCAGCGGAGGCTGTCGGCTTCCCGTCGCGTC
GGCCTCTCTTGTGCCAACTGCCACACGACCACAACCACACTCTGGCGCAGAAACGCCGAGGGAGAGCCCGTCTGTAATG
CCTGTGGACTCTACATGAAGCTTCATGGGGTTCCAAGGCCATTAGCAATGAGAAAAGAGGGCATTCAGACAAGGAAGCG
TAAGCCGAAGAACCTTAACAAAACAAAGACGCCAGCAGGTCCATCCAGCAGTGAGAGTCTTACCCCGACCACGAGCTCC
ACGAGTAGCAGCAGCAGTGCCACGACCACTGAGGAAATGCGCCCCATCAAAACAGAACCAGGGCTCTCATCTCATTATG
GGCACCCCAGCCCAATTTCTCAGGCATTCTCGGTCTCTGCCATGTCTGGACATGGATCTTCAATTCATCCTGCAATTTC
AGCCCTGAAGCTTTCCCCGCAGGCTTACCAGTCAGCCATCAGCCAGTCTCCACAAGCCAGCTCCAAACAGGACTCCTGG
AACAGCCTGGTCTTAGCTGAAAACCATGGGGACATCATAACGGCATAAACTGGTCTTCCACCCATAGACTTGAGGCTGA
TCCACTGGAGAGATGAAGAAGATGCCACGTAATAATCATGTCGATGTTGTTTCCCTCCTCCCCTGCTCTCCTGCCATGT
TCCAACATGTTGGATGTTCCAACATCCGAGATGCTCCAACAAAGAGGTAAAGAGGACTTACGTGAAGTGTAGGAGAGCT
CTTACCAAACAAACCAAGAAGACTCAAATCTCAAAGTAACTAATGGATTTGAAACATTTTTCCTCCCTTCAAACAAGTT
TCCTTGTATTTGATTGTCACTACCTTCTAAGAAATAGCCA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-11
stage 11

Atria

Sinus Venosus

 
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