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A chicken embryo gene expression database 		 
GEISHA - A Chicken Embryo Gene Expression Database
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Gene Expression Report

Probe 1

GEISHA IdASH1.Chesnutt.2004
 NCBIEnsembl
Gene Name ASCL1
Gene Description  
CitationChesnutt C, Burrus LW, Brown AM, Niswander L. Coordinate regulation of neural tube patterning and proliferation by TGFbeta and WNT activity. Dev Biol. 2004 Oct 15;274(2):334-47.
CopyrightReprinted from Developmental Biology, Volume 274, Issue 2, Catherine Chesnutt, Laura W. Burrus, Anthony M.C. Brown, and Lee Niswander, Coordinate regulation of neural tube patterning and proliferation by TGFβ and WNT activity, Pages 334-347, Copyright 2004, with permission from Elsevier. Copyright © 2004 Elsevier B.V. All rights reserved.
CommentsThe authors said the ASH1 probe is referenced in Jasone et al., 1994. Clone was listed there as acc# U01339.
Complete Sequenceshow
GAATTCGGCACGAGCCGTGCACACGTGAGCGTCACGAGCCTCCCCGACGTCGACGAAGTTCGGAGGGAGAAGGGAGGGG
GGGCCCGAGCCGTCCCGTTCCCGGACGGTCGACGTCCTCCGTGGACGCTCTCCCCTCTCCGACTTCCGCGCGTGACGAG
CGGAGCCGCCGCTCCTCTCTCTCCCCCCTCTATCTCTCCACCTCCGGCGGGGGGGCAACGGGGAGCGCCCCCGCCTCGC
ACGACGCCCCCGCGCCCATGGCCAGCGGCAGCCCCGCCGGGATGGCCAGCGGGCAGCCGCCCTTCCTGCAGCCCGCCTG
CTTCTTCGCCGCCGCCGTGGCCGCCGCCGCCGCCGCCGCTCCGCCGGGGCCGCCCCCGGGGGCGCCGCCGCCGCCGCTC
CCGCAGCTGAGCCCGGCGGGCGGGCGGCCGTCTCCCGGCGGGAAGCCGTCCGCGGCGCGGGCCGCCAAGCGGCAGCGCT
CGGCCTCGCCGGAGCTGATGCGCTGCAAGAGGCGGCTCAACTTCAGCGGCTTCGGCTACAGCCTCCCGCAGCAGCAGCC
CGCCGCCGTAGCGCGGCGCAACGAGCGGGAGCGCAACCGAGTCAAGCTGGTGAACCTTGGGTTCGCCACGCTCCGCGAG
CACGTCCCCAACGGCGCGGCTAACAAGAAGATGAGCAAAGTGGAGACGCTGCGCTCCGCCGTCGAGTACATCCGCGCCC
TGCAGCAGCTGCTCGACGAGCACGACGCCGTCAGCGCCGCCTCCCAGGCCGGCGTGCTGTCGCCCACCATCTCGCCCGG
TTACTCCCACGACATGAACTCCATGGCGGGCTCCCCCGTCTCCTCCTACTCCTCCGACGAGGGCTCCTACGACCCGCTC
AGCCCCGAGGAGCAGGAGCTGCTCGACTTCACCAGCTGGTTCTGATCCGGCCCCGGCAGGACGCTCGCGAAAGGGGAGA
TAAGCGCCTCTCCCGCAACCACGCTCGCGGAGCACGCCACCGCCGGCCCACTACCAACTGTTGCGTTTTCCTCTCCCCG
CCGTCGGAGGGCGGTGCGGGCACGGCTCTCGGCGGGCGGCTGCGTCCCCGCGGGGCGGGCGGGGCGGCCACCCTCAGCC
CGGAGGCCCGAACCCCGTTCTGTGCCCCGCGGTGGCCCCGAGGAGCCCTTTCCCTGCTGCCCGTCCCCTCCGTACGGCG
TCCGCGCTCTCTGGACCACGTTTCCCGGTGTTTGTGGAGATGTCGAGATGAAGCTATGCTGTACTCAAAGAACCCCCCC
CCCGACCCGTTCCAGAGTCGCCCTCCCTCCGACCCTTTTTTTTTTCACCATAGAATGCTTCCAATTTTTTTTTTTTTAA
TTATTATTTTGGTGAATTTTTTTATTATAAGAAAATCTATTTGTATCCTCCCTGACCAGTTTGGGGACATATATTAAGC
TATTTTTGTACATAAGAGAGAGAGAGATTTATAGAGGTTTTGTACAAATGGTTTAAAATGTGTATATCTTGATACGTTT
TTTAATACACGATGCTTTTACCTCTCGGTGTGTAGACGTGCGGTCGGCGTTACTTTCCCGCTGCCATCTCGGTCCGTGC
TTTTGTCGAGGCCTTGGACTCCCTCCAGCTGTACTTTAGCACCGACGTGTCTTACTTCATAGAAACTTTGTTAATGTAT
TAATAACGTTGTGAAAACCGTGTTCCGAGGGAACCACGTTTATGCAGCTATTGTCCAAACGCAGAAGAGCGGCCGTCTG
GTTTTGTATGCTGCCTTTTGGGGGGGAAAAAAAAAAAACCAACCAAGTGACAATGCTACAAATAAGGAACCAACCGGCC
CCGCTGGCACTGCCTTTTTCGTATTGCTCTATGACAAGCTCACCAGGCCCTGTATAACCCTGTTTTATACAAACTAGTT
TCGTAATAAAACTTTCTCGTGCCGAATTC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-14
stage 14

Neural Crest

Spinal Cord

 

Probe 2

GEISHA IdCash-1.McPherson.2000
 NCBIEnsembl
Gene NameASCL1ASCL1
Aliasesachaete-scute complex homolog 1|achaete-scute complex-like 1 
Gene Descriptionachaete-scute complex homolog 1 (Drosophila) 
Gene Ontologyshow
GO:0003677 DNA binding IEA
GO:0005634 nucleus IEA
GO:0030528 transcription regulator activity IEA
GO:0045449 regulation of transcription IEA
CitationMcPherson CE, Varley JE, Maxwell GD. Expression and regulation of type I BMP receptors during early avian sympathetic ganglion development. Dev Biol. 2000 May 1;221(1):220-32.
CopyrightReprinted with permission from Elsevier. Copyright © 2000 Elsevier B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_421225). Images are Quail, sequence and map are from chick ASCL1.
Complete Sequenceshow
GAATTCGGCACGAGCCGTGCACACGTGAGCGTCACGAGCCTCCCCGACGTCGACGAAGTTCGGAGGGAGAAGGGAGGGG
GGGCCCGAGCCGTCCCGTTCCCGGACGGTCGACGTCCTCCGTGGACGCTCTCCCCTCTCCGACTTCCGCGCGTGACGAG
CGGAGCCGCCGCTCCTCTCTCTCCCCCCTCTATCTCTCCACCTCCGGCGGGGGGGCAACGGGGAGCGCCCCCGCCTCGC
ACGACGCCCCCGCGCCCATGGCCAGCGGCAGCCCCGCCGGGATGGCCAGCGGGCAGCCGCCCTTCCTGCAGCCCGCCTG
CTTCTTCGCCGCCGCCGTGGCCGCCGCCGCCGCCGCCGCTCCGCCGGGGCCGCCCCCGGGGGCGCCGCCGCCGCCGCTC
CCGCAGCTGAGCCCGGCGGGCGGGCGGCCGTCTCCCGGCGGGAAGCCGTCCGCGGCGCGGGCCGCCAAGCGGCAGCGCT
CGGCCTCGCCGGAGCTGATGCGCTGCAAGAGGCGGCTCAACTTCAGCGGCTTCGGCTACAGCCTCCCGCAGCAGCAGCC
CGCCGCCGTAGCGCGGCGCAACGAGCGGGAGCGCAACCGAGTCAAGCTGGTGAACCTTGGGTTCGCCACGCTCCGCGAG
CACGTCCCCAACGGCGCGGCTAACAAGAAGATGAGCAAAGTGGAGACGCTGCGCTCCGCCGTCGAGTACATCCGCGCCC
TGCAGCAGCTGCTCGACGAGCACGACGCCGTCAGCGCCGCCTCCCAGGCCGGCGTGCTGTCGCCCACCATCTCGCCCGG
TTACTCCCACGACATGAACTCCATGGCGGGCTCCCCCGTCTCCTCCTACTCCTCCGACGAGGGCTCCTACGACCCGCTC
AGCCCCGAGGAGCAGGAGCTGCTCGACTTCACCAGCTGGTTCTGATCCGGCCCCGGCAGGACGCTCGCGAAAGGGGAGA
TAAGCGCCTCTCCCGCAACCACGCTCGCGGAGCACGCCACCGCCGGCCCACTACCAACTGTTGCGTTTTCCTCTCCCCG
CCGTCGGAGGGCGGTGCGGGCACGGCTCTCGGCGGGCGGCTGCGTCCCCGCGGGGCGGGCGGGGCGGCCACCCTCAGCC
CGGAGGCCCGAACCCCGTTCTGTGCCCCGCGGTGGCCCCGAGGAGCCCTTTCCCTGCTGCCCGTCCCCTCCGTACGGCG
TCCGCGCTCTCTGGACCACGTTTCCCGGTGTTTGTGGAGATGTCGAGATGAAGCTATGCTGTACTCAAAGAACCCCCCC
CCCGACCCGTTCCAGAGTCGCCCTCCCTCCGACCCTTTTTTTTTTCACCATAGAATGCTTCCAATTTTTTTTTTTTTAA
TTATTATTTTGGTGAATTTTTTTATTATAAGAAAATCTATTTGTATCCTCCCTGACCAGTTTGGGGACATATATTAAGC
TATTTTTGTACATAAGAGAGAGAGAGATTTATAGAGGTTTTGTACAAATGGTTTAAAATGTGTATATCTTGATACGTTT
TTTAATACACGATGCTTTTACCTCTCGGTGTGTAGACGTGCGGTCGGCGTTACTTTCCCGCTGCCATCTCGGTCCGTGC
TTTTGTCGAGGCCTTGGACTCCCTCCAGCTGTACTTTAGCACCGACGTGTCTTACTTCATAGAAACTTTGTTAATGTAT
TAATAACGTTGTGAAAACCGTGTTCCGAGGGAACCACGTTTATGCAGCTATTGTCCAAACGCAGAAGAGCGGCCGTCTG
GTTTTGTATGCTGCCTTTTGGGGGGGAAAAAAAAAAAACCAACCAAGTGACAATGCTACAAATAAGGAACCAACCGGCC
CCGCTGGCACTGCCTTTTTCGTATTGCTCTATGACAAGCTCACCAGGCCCTGTATAACCCTGTTTTATACAAACTAGTT
TCGTAATAAAACTTTCTCGTGCCGAATTC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 16
stage 17
stage 18
stage 18

Dermomyotome

Spinal Ganglia and Nerves

Figure 4 compares the expressions of Cash-1, BMP-4, BMPR-IA, and BMPR-IB mRNA in stage 16, 17, and 18 quail embryos.

Quail

Sympathetic Ganglia

19-23
stage 23
stage 23

Spinal Ganglia and Nerves

Figure 2 compares the expressions of BMP-4, BMPR-IA, BMPR-IB, and TH mRNAs in stage HH23 quail embryos.

Quail

Sympathetic Ganglia
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