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A chicken embryo gene expression database
 
GEISHA - A Chicken Embryo Gene Expression Database
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Gene Expression Report
GEISHA IdPDX1.Pedersen.2005
 NCBIEnsembl
Gene NamePDX1PDX1
Gene Descriptionpancreatic and duodenal homeobox 1Pancreas/duodenum homeobox protein 1 (PDX-1) (Insulin promoter factor 1) (IPF-1) (Islet/duodenum homeobox-1) (IDX-1) (Somatostatin- transactivating factor 1) (STF-1) (Insulin upstream factor 1) (IUF-1) (Glucose-sensitive factor) (GSF). [Source:Uniprot/SWISSPROT;Acc:P52945]
Ensembl Genome Map
contig view
CitationPedersen JK, Nelson SB, Jorgensen MC, Henseleit KD, Fujitani Y, Wright CV, Sander M, Serup P; Beta Cell Biology Consortium. Endodermal expression of Nkx6 genes depends differentially on Pdx1. Dev Biol. 2005 Dec 15;288(2):487-501.
CopyrightCopyright © 2005 Elsevier Inc. All rights reserved.
CommentsAccording to the authors, "cPdx1 was a kind gift from Seung Kim and Mattias Hebrok". As information provided was insufficient to verify exact sequence used to synthesize probe,the sequence below was obtained from NCBI (XM_001234635).
Complete Sequenceshow
ATGAACACCGAGGAGCAGTACTACGCCTCCGCGCAGCTCTACAAGGAGCCGTGCGCCTTTCAGAGAGCGCAGGATTACA
GCCCCAGCCCCCCCGCCTGCCTCTACGTGGGCCGGCAGCAGCAGGCTCCGTACCCCGGCTCTCTGGGGGCGCTGGAGCA
GGGCAGCCCGTCGGACATCTCGCCCTACGAGGTGCCCCCCATCAGCGAGGATGCCGGGGTCTCCCACCTGCATCACCAC
CACCATCACCACCCTCACCTCCCTCCCCCCCACCAGGACGCTCTGCCTTTCGCCGACGGGGCGGACCCGGGGGCGATGG
AGGAGCCTCGGGTGCAGGTGCCTTTCGCCTGGATGAAGTCCACCAAGTCGCACGCCTGGAAGGGGCAGTGGGCAGGGGG
TTCCTACGTGGTGGAGCCGGAGGAGAACAAGAGGACGCGGACGGCCTACACGAGGGCTCAGCTGCTGGAGCTGGAGAAG
GAGTTTCTCTTCAACAAGTACATCTCCCGACCGAGGCGGGTGGAGCTGGCCGTCATGTTAAACCTGACCGAGAGACACA
TCAAGATCTGGTTCCAGAACCGACGGATGAAATGGAAGAAAGAAGAAGACAAAAAGCGGGGGACGGCCAACAGCGCTGA
TCCCGAGCAGGACTGCGTCGTGTCCTCCGGGAAGCTGCAGGGCAAAGAGGATCTGCAGCCGTGA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
stage 11

Endoderm

Pancreas

Chicken embryos with antisense probes recognizing Nkx6.1, Nkx6.2, Nkx6.3, Nkx2.2, and Pdx1.

Prospective Pancreatic Endoderm

13-17
stage 15
stage 15
stage 17

Endoderm

Pancreas

Chicken embryos with antisense probes recognizing Nkx6.1, Nkx6.2, Nkx6.3, Nkx2.2, and Pdx1.

Pancreatic Buds

Pancreatic Primordia

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