home | contact
A chicken embryo gene expression database 		 
GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
  Data Class
  Enter Text:
  go
- Gene Family QuickSearch
 
¥ Transcription Factors
¥ Growth Factors
¥ Receptors
¥ MicroRNAs
Documents
- About GEISHA
- Protocols
- Contact Us
Resources
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_
Gene Expression Report
GEISHA IdChEST117k22
 NCBIEnsembl
Gene NamePSMC5PSMC5
AliasesPSMC5, proteasome (prosome, macropain) 26S subunit, ATPase, 5, Official 
Gene Descriptionproteasome (prosome, macropain) 26S subunit, ATPase, 526S protease regulatory subunit 8 (Proteasome 26S subunit ATPase 5) (Proteasome subunit p45) (p45/SUG) (Thyroid hormone receptor- interacting protein 1) (TRIP1). [Source:Uniprot/SWISSPROT;Acc:P62195]
Gene Ontologyshow
GO:0000166 nucleotide binding IEA
GO:0005524 ATP binding IEA
GO:0005634 nucleus IEA
GO:0005737 cytoplasm IEA
GO:0016787 hydrolase activity IEA
GO:0017111 nucleoside-triphosphatase activity IEA
GO:0030163 protein catabolic process IEA
show
GO:0005102 receptor binding IEA
GO:0005515 protein binding IEA
GO:0016481 negative regulation of transcription IEA
NCBI Nucleotide HitXM_425834 show details
scoreevaluealignment lengthdescription
8750.0875PREDICTED: Gallus gallus proteasome (prosome, macropain) 26S subunit, ATPase, 5 (PSMC5), mRNA
Ensembl Genome Map
contig view
Commentswidespread expression with higher expression in heart at older stages.
5' Sequenceshow
CTTTAGTGCCGGCAGCAGCGGCGCCGGGGTTCGATGCCGGCGGAGAAGATGGCGGTGGACGGCCCCGAGCAGATGGAGA
TGGACGATGGGAAGGGCGGCACGGGGCTGCGGCAGTACTACCTGTCCAAGATTGAGGAGCTGCAGCTCATAGTGAATGA
GAAAAGCCAGAACCTGCGGCGTTTGCAAGCTCAGAGAAATGAGTTGAACGCTAAAGTGAGGCTGTTGCGGGAGGAGCTG
CAGCTGCTGCAGGAGCAGGGCTCCTATGTGGGTGAGGTGGTGAGAGCCATGGACAAGAAGAAAGTGCTCGTGAAGGTGC
ACCCAGAAGGGAAATTCGTGGTGGATGTTGACAAGAACATTGACATTAATGATGTGACCCCAAACTGCCGCGTGGCCCT
GCGCAACGACAGCTACACTCTGCATAAGATCCTCCCCAACAAAGTGGACCCTCTGGTGTCTCTGATGATGGTGGAGAAG
GTCCCAGATTCCACTTACGAGATGATCGGAGGGTTGGACAAGCAGATAAAGGAGATCAAGGAAGTGATTGAGTTGCCAG
TCAAGCACCCGGAGCTCTTTGAGGCGCTGGGGATTGCTCAGCCCAAGGGCGTGCTGCTCTACGGACCCCCTGGCACTGG
CAAGACTTTGCTGGCCAGAGCTGTGGCCCACCACACTGACTGCACCTTCATCCGCGTGTCGGGCTCTGAGCTGGTGCAG
AAATTCATCGGTGAAGGTGCCCGCATGGTGCGGGAGCTGTTTGTGATGGCCCGGGAGCACGCTCCCTCCATCATCTTCA
TGGATGAGATCGACTCCATCGGCTCCTCCCGCCTGGAGGGTGGCTCTGGTGGGGACAGTGAGGTGCAGCGCACGATGCT
GGAGCT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6

Area Pellucida

Early Mesoderm

 
7-12
stage 11
stage 11
stage 12

Anterior Intestinal Portal

Extraembryonic

Heart Tube

Lateral Plate Mesoderm

Notochord

Surface Ectoderm

 
13-18
stage 14
stage 15
stage 18

Heart Tube

Hindbrain

Spinal Cord

Widespread Expression

 
19-23
stage 23

Widespread Expression

 
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona