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A chicken embryo gene expression database 		 
GEISHA - A Chicken Embryo Gene Expression Database
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Gene Expression Report

Probe 1

GEISHA IdR24
 NCBIEnsembl
Gene NameHSPA5GRP78_CHICK
AliasesGRP78, heat shock 70kDa protein 5, HSPA5, heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa), Official 
Gene Descriptionheat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)78 kDa glucose-regulated protein precursor (GRP 78) (Heat shock 70 kDa protein 5) (Immunoglobulin heavy chain-binding protein) (BiP). [Source:Uniprot/SWISSPROT;Acc:Q90593]
Gene Ontologyshow
GO:0000166 nucleotide binding IEA
GO:0005515 protein binding IEA
GO:0005524 ATP binding IEA
GO:0005783 endoplasmic reticulum IEA
GO:0005788 endoplasmic reticulum lumen IEA
GO:0006983 ER overload response IEA
GO:0009986 cell surface ISS
GO:0043022 ribosome binding IEA
show
GO:0000166 nucleotide binding IEA
GO:0005515 protein binding IEA
GO:0005524 ATP binding IEA
GO:0005634 nucleus IEA
GO:0005783 endoplasmic reticulum IEA
GO:0005793 ER-Golgi intermediate compartment IEA
GO:0006916 anti-apoptosis IEA
GO:0006983 ER overload response IEA
GO:0008303 caspase complex IEA
GO:0009986 cell surface IEA
GO:0030176 integral to endoplasmic reticulum membrane IEA
GO:0043022 ribosome binding IEA
GO:0043027 caspase inhibitor activity IEA
GO:0043154 negative regulation of caspase activity IEA
GO:0048471 perinuclear region of cytoplasm IEA
NCBI Nucleotide HitNM_205491 show details
scoreevaluealignment lengthdescription
6320.0636Gallus gallus heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) (HSPA5), mRNA
Ensembl Genome Map
contig view
Commentsnegative stages 13-22
5' Sequenceshow
GTGGAGACGCGACGGTTCGTGTGTGACGAGCGGCGAGCGGGCGGCATGAGGCACCTCCTGTTGGCGCTGCTGCTGCTGG
GCGGCGCGCGGGCGGACGATGAGGAGAAAAAGGAGGACGTGGGCACGGTGGTGGGCATCGACCTCGGTACCACCTATTC
TTGTGTGGGTGTATTCAAGAACGGCCGCGTGGAAATCATTGCCAATGACCAGGGGAACCGCATCACGCCATCCTACGTG
GCGTTCACGCCTGAGGGGGAGCGCCTGATTGGGGATGCAGCCAAGAACCAGCTGACATCCAACCCTGAGAACACTGTGT
TTGATGCCAAGCGGCTCATAGGCCGCACCTGGAATGACCCCTCTGTACAGCAGGACATCAAGTATCTGCCCTTCAAGGT
TGTTGAAAAGAAGGCCAAGCCACATATTCAGGTCGATGTTGGTGGTGGACAAACAAAAACATTTGCTCCTGAAGAAATT
TCTGCCATGGTCCTGACAAAGATGAAAGAAACTGCAGAGGCTTATCTGGGCAAGAAAGTTACTCATGCTGTTGTTACTG
TGCCAGCCTACTTCAATGATGCTCAGCGTCAGGCCACAAAAGATGCTGGTACTATTGCTGGGTTGAACGTGATGCGCAT
TATTAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 8
stage 12
stage 12

Anterior Intestinal Portal

Area Opaca

Endoderm, early

Extraembryonic

Notochord

Surface Ectoderm

 

Probe 2

GEISHA IdG40
 NCBIEnsembl
Gene NameHSPA5GRP78_CHICK
AliasesGRP78, heat shock 70kDa protein 5, HSPA5, heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa), Official 
Gene Descriptionheat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)78 kDa glucose-regulated protein precursor (GRP 78) (Heat shock 70 kDa protein 5) (Immunoglobulin heavy chain-binding protein) (BiP). [Source:Uniprot/SWISSPROT;Acc:Q90593]
Gene Ontologyshow
GO:0000166 nucleotide binding IEA
GO:0005515 protein binding IEA
GO:0005524 ATP binding IEA
GO:0005783 endoplasmic reticulum IEA
GO:0005788 endoplasmic reticulum lumen IEA
GO:0006983 ER overload response IEA
GO:0009986 cell surface ISS
GO:0043022 ribosome binding IEA
show
GO:0000166 nucleotide binding IEA
GO:0005515 protein binding IEA
GO:0005524 ATP binding IEA
GO:0005634 nucleus IEA
GO:0005783 endoplasmic reticulum IEA
GO:0005793 ER-Golgi intermediate compartment IEA
GO:0006916 anti-apoptosis IEA
GO:0006983 ER overload response IEA
GO:0008303 caspase complex IEA
GO:0009986 cell surface IEA
GO:0030176 integral to endoplasmic reticulum membrane IEA
GO:0043022 ribosome binding IEA
GO:0043027 caspase inhibitor activity IEA
GO:0043154 negative regulation of caspase activity IEA
GO:0048471 perinuclear region of cytoplasm IEA
NCBI Nucleotide HitNM_205491 show details
scoreevaluealignment lengthdescription
5070.0507Gallus gallus heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) (HSPA5), mRNA
Ensembl Genome Map
contig view
5' Sequenceshow
GGTTGGAGACGCGACGGTTCGTGTGTGACGAGCGGCGAGCGGGCGGCATGAGGCACCTCCTGTTGGCGCTGCTGCTGCT
GGGCGGCGCGCGGGCGGACGATGAGGAGAAAAAGGAGGACGTGGGCACGGTGGTGGGCATCGACCTCGGTACCACCTAT
TCTTGTGTGGGTGTATTCAAGAACGGCCGCGTGGAAATCATTGCCAATGACCAGGGGAACCGCATCACGCCATCCTACG
TGGCGTTCACGCCTGAGGGGGAGCGCCTGATTGGGGATGCAGCCAAGAACCAGCTGACATCCAACCCTGAGAACACTGT
GTTTGATGCCAAGCGGCTCATAGGCCGCACCTGGAATGACCCCTCTGTACAGCAGGACATCAAGTATCTGCCCTTCAAG
GTTGTTGAAAAGAAGGCCAAGCCACATATTCAGGTCGATGTTGGTGGTGGACAAACAAAAACATTTGCTCCTGAAGAAA
TTTCTGCCATGGTCCTGACAAAGATGAAAGAAACTGC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
 
stage 2

Unlabeled Embryonic

 
7-12
stage 4
stage 4
stage 4
stage 6

Endoderm, early

Germinal Crescent

Head Process

Hensen's Node

Surface Ectoderm

 
13-17
stage 16
stage 17

Unlabeled Extraembryonic

Widespread Expression

 

Probe 3

GEISHA IdP40
 NCBIEnsembl
Gene NameHSPA5GRP78_CHICK
AliasesGRP78, heat shock 70kDa protein 5, HSPA5, heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa), Official 
Gene Descriptionheat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)78 kDa glucose-regulated protein precursor (GRP 78) (Heat shock 70 kDa protein 5) (Immunoglobulin heavy chain-binding protein) (BiP). [Source:Uniprot/SWISSPROT;Acc:Q90593]
Gene Ontologyshow
GO:0000166 nucleotide binding IEA
GO:0005515 protein binding IEA
GO:0005524 ATP binding IEA
GO:0005783 endoplasmic reticulum IEA
GO:0005788 endoplasmic reticulum lumen IEA
GO:0006983 ER overload response IEA
GO:0009986 cell surface ISS
GO:0043022 ribosome binding IEA
show
GO:0000166 nucleotide binding IEA
GO:0005515 protein binding IEA
GO:0005524 ATP binding IEA
GO:0005634 nucleus IEA
GO:0005783 endoplasmic reticulum IEA
GO:0005793 ER-Golgi intermediate compartment IEA
GO:0006916 anti-apoptosis IEA
GO:0006983 ER overload response IEA
GO:0008303 caspase complex IEA
GO:0009986 cell surface IEA
GO:0030176 integral to endoplasmic reticulum membrane IEA
GO:0043022 ribosome binding IEA
GO:0043027 caspase inhibitor activity IEA
GO:0043154 negative regulation of caspase activity IEA
GO:0048471 perinuclear region of cytoplasm IEA
NCBI Nucleotide HitNM_205491 show details
scoreevaluealignment lengthdescription
6250.0629Gallus gallus heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) (HSPA5), mRNA
Ensembl Genome Map
contig view
Commentsstages 14, 15, 22 negative for embryonic expression
5' Sequenceshow
GGACGGTTCGTGTGTGACGAGCGGCGAGCGGGCGGCATGAGGCACCTCCTGTTGGCGCTGCTGCTGCTGGGCGGCGCGC
GGGCGGACGATGAGGAGAAAAAGGAGGACGTGGGCACGGTGGTGGGCATCGACCTCGGTACCACCTATTCTTGTGTGGG
TGTATTCAAGAACGGCCGCGTGGAAATCATTGCCAATGACCAGGGGAACCGCATCACGCCATCCTACGTGGCGTTCACG
CCTGAGGGGGAGCGCCTGATTGGGGATGCAGCCAAGAACCAGCTGACATCCAACCCTGAGAACACTGTGTTTGATGCCA
AGCGGCTCATAGGCCGCACCTGGAATGACCCCTCTGTACAGCAGGACATCAAGTATCTGCCCTTCAAGGTTGTTGAAAA
GAAGGCCAAGCCACATATTCAGGTCGATGTTGGTGGTGGACAAACAAAAACATTTGCTCCTGAAGAAATTTCTGCCATG
GTCCTGACAAAGATGAAAGAAACTGCAGAGGCTTATCTGGGCAAGAAAGTTACTCATGCTGTTGTTACTGTGCCAGCCT
ACTTCAATGATGCTCAGCGTCAGGCCACAAAAGATGCTGGTACTATTGCTGGGTTGAACGTGATGCGCATTATTAAT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
stage 12
stage 12

Endoderm, early

Extraembryonic

 
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