GEISHA 2.0

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A chicken embryo gene expression database

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Gene Expression Report

Probe 1

GEISHA Id	Not1.Chapman.2008
	NCBI	Ensembl
Gene Name		CNOT1
Gene Description		CCR4-NOT transcription complex, subunit 1 isoform a [Source:RefSeq_peptide;Acc:NP_057368]
Ensembl Genome Map	contig view
Comments	Images Provided by Susan Chapman
Complete Sequence	show CGTGAGCGCGCGACCTGTCCGCCATTTTGTAGCGCAACGGCGGAGACGAGAGGAGAAAAGCGCGAGCGGCCGCAGCCCG GCGCCTTGCTCCGGCCCCGCCGCCTCTGAGGTGCCATGTTTCTGTACAGAGGAAGACAACTGAGAAAGAGCTGAAGAAA GTAACACAACCAGATACAGGCTAATTGGGGGAAAAACAATTAACCTGTCTCTGAGGTGACTAAAGGGGAATAATGGTGA TTTTGCGCCGGGCTCGGCCGCCTGCTTCCGCCCCAACCAGCAATGAATCTTGACTCGCTCTCGCTGGCCTTGTCTCAAA TCAGCTACCTGGTGGACAATTTAACCAAGAAAAACTACCGAGCCAGCCAGCAAGAAATACAGCACATTGTGAATAGGCA CGGTCCCGAGGCAGACAGGCATTTACTACGCTGTCTATTCTCGCACGTGGATTTCAGTGGCGATGGTAAAAGCAGTGGC AAAGATTTCCATCAGACTCAATTTCTGATCCAGGAGTGTGCGTCGCTGATTACAAAACCAAACTTTATCTCGACGCTGT CCTACGCCATTGACAATCCATTGCACTATCAGAAGAGTCTAAAGCCTTCACCCCATTTATTTGCCCAATTGAGTAAAGT CATCAAATTAAGTAAAGTTCAAGAGGTGATATTTGGTCTCGCTTTACTGAACTCTTTCAGCTCAGATCTACGAGGTTTT GCTGCCCAGTTTATCAAACAGAAACTCCCAGATCTTTTACGCTCTTACATTGACGCGGACGTCAGTGGAAATCAAGAAG GTGGCTTCCAAGATATTGCAATAGAGGTCCTGCACCTTCTCCTCTCCCATCTCCTTTTTGGGCAGAAGGGAGCCTTTGG GGTGGGACAGGAACAGATTGACGCTTTCCTCAAAACATTACGTAGAGATTTTCCCCAGGAGCGTTGCCCTGTGGTGCTT GCACCACTTCTATACCCTGAAAAACGGGACATTCTAATGGACAGGATCCTGCCTGATTCTGGAGGGATAGCCAAAACAA TGATGGAGAGTTCTCTGGCAGACTTTATGCAAGAAGTTGGCTATGGCTTTTGTACAAGCATTGAAGAATGTCGCAACAT AATCATGCAGTTTGGAGTCCGGGAGGTGACGGCTGCCCAGGTTGCCAGGGTTCTGGGGATGATGGCTCGAACGCATTCG GGGTTGACGGATGGTATTCCATTACAATCTATTTCGGCTCCTGGCAGTGGAATTTGGAGCGATGGGAAAGATAAAAGTG ATGGAGCACAAGCCCATACCTGGAATGTGGAGGTCCTAATTGATGTTCTTAAAGAGCTGAATCCTAGCCTGGATTTCAA AGTAGTAACGTATGAATTGGACCACCCAGGATTTCAGATTCGTGACAGCAAAGGCCTGCATATTGTGGTGTTTGGCATC CAGAGAGGGCTAGGCATGGAAGTTTTTCCAGTTAATGCCATATACAGACCTTGGAAGCATGCAGAGGGCCAGCTCTCCT TCATTCAACATTCCCTCATAAACCCGGACATCTTTTGTTTTGCTGACTACCCTTGTCATGCTGTTACCACAGACATCCT GAAAGCACCACCAGAGGATGACAATCGAGAAATTGCTACATGGAAGAGCCTGGATTTGATCGAATCTCTGTTACGGTTG GCAGAAGTGGGACAGTATGAGCAGGTTAAGCAGCTCTTCAGTTTTCCCATCAAGCATTGCCCAGATATGTTGGTATTGG CCTTATTGCAGATCAACACTTCCTGGCATACCTTGCGCCATGAACTCATCTCCACGCTCATGCCAATCTTCCTTGGCAA CCATCCCAATTCTGCCATCATTTTGCACTATGCATGGCATGGGCAGGGTCAGTCTCCTTCGATTCGCCAGCTTATCATG CATGCAATGGCAGAATGGTACATGAGAGGGGAGCAGTATGACCAGGCAAAATTGTCACGTATTCTTGATGTGGCGCAAG ACTTGAAGGCCTTGTCAATGCTGCTAAATGGTACTCCGTTTGCCTTTGTTATTGACCTTGCTGCACTTGCCTCTCGACG AGAATACCTCAAACTTGACAAATGGCTCACAGACAAAATTCGGGAGCATGGGGAGCCCTTCATCCAGGCCTGCATGACC TTCTTAAAGAGAAGATGTCCATCTATCCTAGGTGGCCTTGCTCCAGAAAAAGATCAACCCAAAAGTGCTCAGCTTCCTC CAGAAACCTTGGCAACTATGTTGGCATGCCTGCAGGCTTGTGCTGGGAGTGTTTCTCAGGAGCTGTCGGAGACCATCCT CACCATGGTAGCCAACTGCAGTAATGTCATGAACAAGGCCAGACAGCCACCACCTGGAGTCATGCCCAAAGGCCGCCCG CCCAGCGCGAGCAGCCTGGATGCCATCTCTCCTGTGCAGATTGACTCGCTTGCAGGAATGGCATCTCTGAGTTTAGGTG GCTCGGCTGCTCCTCACACCCAGAGCATGCAAGGCTTCCCTCCAAACTTGGGCTCTGCGTTCAGTACTCCTCAGTCACC AGCAAAAGCGTTTCCCCCTCTTTCCACCCAAAACCAGACAACAGGTTTCAGTGGCATTGGAGGACTCTCTTCACAGCTT CCAGTAGGTGGTCTTACTACGGGTAGCCTGACTGGCATAGGAACTGGAGCCCTGGGCCTTCCTGCAGTGAACAATGACC CATTCGTGCAAAGGAAGCTGAGCACATCTGGACTGAGCCAGCCTACGTTCCAGCAGAGTAAGATGAAACCTTCTGACTT ATCTCAGGTGTGGCCAGAGGCTAATCAGAACTTTAGCAAAGAAATAGATGATGAGGCAAACAGCTACTTCCAGCGTATC TATAACCATCCACCACATCCAACCATGTCTGTAGATGAGGTCTTGGAAATGCTGCAGAGGTTTAAGGACTCCAATATTA AACGGGAACGAGAAGTGTTTAACTGTATGCTGAGGAACTTGTTTGAGGAATACCGTTTCTTTCCCCAGTACCCAGACAA AGAGCTGCACATAACAGCCTGCCTCTTTGGTGGGATAATAGAGAAAGGACTGGTTACTTACATGGCTTTGGGCCTGGCC CTTCGCTACGTTCTTGAAGCCTTACGAAAGCCTTTTGCGTCCAAAATGTACTATTTTGGTATTGCTGCACTAGATAGAT TTAAAAATAGATTGAAGGACTATCCCCAGTATTGTCAGCACTTGGCTTCTATTAGTCACTTTATACAGTTCCCTCATCA CTTGCAGGAGTACATAGAATACGGACAGCAGTCTAGAGATCCTCCTGTGAAAATGCAGGGTTCAATCACCACCCCTGGA AGTATTGCACTTGCCCAGGCTCAGGCCCAGGCCCAGGTTCCAGCAAAGGCTCCTCTTGCTGGCCAAGTCAGCACTATAG TAACCACCTCAACCACCACCACTGTTGCAAAAACCATCACGATCACTCGACCAACTGGAGTCAGCTTCAAGAAAGATGT GCCGCCTTCCATTAATACTACCAACATTGATACACTGTTAGTAGCAACGGATCAAACTGAGAGAATTGTGGAACCTCCA GAGAACGTCCAGGAAAAAATTGCTTTCATCTTCAATAATCTGTCTCAGTCAAACATGACACAGAAGGTTGAAGAACTGA AGGAAACAGTGAAAGAAGAGTTCATGCCTTGGGTATCGCAGTATCTCGTGATGAAGAGAGTCAGCATTGAGCCAAATTT TCACAGCTTATATTCAAACTTCCTTGACACCCTTAAGAATCCAGAGTTTAATAAAATGGTTCTGAATGAAACTTACAGA AATATCAAGGTGCTACTGACATCAGATAAGGCTGCAGCCAACTTCTCCGACCGTTCCTTGTTAAAGAACCTTGGTCACT GGCTGGGAATGATTACCCTGGCTAAAAATAAACCCATCTTGCACACGGATTTGGATGTGAAGTCACTACTACTGGAAGC GTATGTGAAGGGACAGCAGGAATTGCTTTATGTAGTACCATTTGTTGCCAAAGTCTTAGAATCCAGTGTCAGGAGTGTG GTCTTCAGGCCTCCAAACCCATGGACAATGGCCATTATGAATGTTTTAGCTGAGCTGCATCAAGAACATGATCTAAAAG TAAATTTTCTGCTTTGTTTGTACCTATTGAGCTTGAGGTTTTCTTGACACACCAGTCAGNCTGAACCTGGCAGTCTCCT GAAAGATAAGGATCGTCTGAAAAATCTGGATGAGCAGCTGTCTGCTCCAAAGAAGGATGTGAAGCAGCCAGAAGAGCTA CCACCCATCACAACAACCACCGCTTCTACAACTCCAGCTACCAGCACCACTTGTACAGCCACAGTTCCTCCACAGCCCC AGTACAGTTATCATGACATCAATGTCTATTCATTAGGAGGACTGGCTCCACACATTACCTTAAATCCAACGATCCCGCT GTTTCAGGCCCACCCCCAGCTGAAGCAGTGTGTGCGGCAGGCTATAGAGCGAGCGGTGCAGGAGCTCGTCCATCCCGTG GTCGATCGGTCCATTAAGATTGCCATGACTACTTGTGAGCAGATAGTCAGGAAGGACTTTGCACTGGATTCGGAGGAGT CACGAATGCGTGTGGCTGCACACCATATGATGCGGAACTTGACTGCTGGGATGGCCATGATCACCTGCAGGGAACCTTT GCTCATGAGCATAGCTACCAACTTGAAGAACAGTTTTGCTACTGCGCTGAGGGCAGCCTCCCCACAACAGAGGGACATG ATGGAGCAAGCAGCTGCCCAGCTGGCGCAGGATAACTGTGAGCTGGCGTGCTGCTTTATCCAGAAGACAGCTGTGGAAA AAGCAGGCCCTGAAATGGACAAGAGGCTGGCGACTGAATTTGAGCTCAGAAAACATGCTAGACAAGAGGGTCGTCGGTA CTGTGATCCTGTTGTGTTAACTTACCAAGCTGAACGGATGCCAGAACAGATCAGGTTAAAGGTTGGAGGTGTGGACCCA AAACAGCTGGCTGTTTACGAAGAGTTCGCACGTAACGTCCCCGGCTTCTTGCCTACCAATGACTTAACTCAGCCTACAG GATTCTTGGCTCAACCTATGAAGCAAGCTTGGGCCACAGATGATGTAGCACAAATCTATGACAAATGCATGACAGAACT GGAGCAGCACCTACAGTCCATTCCCCATACTCTGGCCATGAATCCTCAAGCTCAAGCATTACGCAGCCTCCTGGAGGCT GTGGTGGTCGCTCGGAACTCCCGTGATGCCATCGCTGCGCTTGGACTGCTGCAGAAGGCTGTAGAGGGCTTACTGGATG CCACCAGTGGGGCAGATGCTGACCTTCTGCTTCGCTATCGTGAGTGTCACCTGCTGGTGCTGAAGGCTCTGCAGGACGG CCGTGCGTATGGATCTCCGTGGTGTAACAAGCAGATTACCAGGTGCCTGATTGAGTGTAGAGATGAGTACAAGTACAAC GTGGAAGCTGTGGAGCTGCTAATCCGCAATCACCTGGTTAACATGCAGCAGTATGATCTTCACCTGGCACAGTCAATGG AGAACGGCTTGAACTATATGGCTGTGGCATTTGCCATGCAGTTGGTAAAGATCCTTCTTGTGGATGAGAGAAGTGTTGC CCATGTAACAGAGGCAGATCTGTTCCACACCATCGAGACGCTCATGAGGATTAATGCTCATTCCAGAGGGAATGCCCCA GAAGGGTTACCCCAGTTGATGGAAGTGGTCCGATCAAACTACGAAGCAATGATTGACCGTGCTCACGGAGGTCCCAATT TCATGATGCATTCTGGAATTTCCCAAGCCTCTGAGTATGATGATCCACCAGGTCTGAGGGAGAAGGCAGAATACCTGCT GAGGGAGTGGGTCAACCTCTACCATTCTGCTGCAGCGGGCCGCGACAGTACCAAAGCGTTCTCTGCGTTTGTTGGACAG ATGCACCAGCAAGGGATCCTGAAAACAGATGACCTGATCACCCGCTTTTTCCGGCTTTGCACTGAAATGTGTGTTGAAA TCAGCTATCGTGCTCAGGCTGAGCAACAGCACAACCCTGCTGCCAACCCCACGATGATCCGGGCCAAGTGCTACCACAA TCTGGATGCCTTTGTGCGGCTTATTGCACTGCTTGTGAAGCACTCTGGAGAAGCAACCAACACCGTTACGAAGATCAAC CTCCTGAACAAGGTTCTTGGTATTGTGGTGGGAGTTCTTCTGCAAGACCATGAAGTTCGGCAGGGTGAGTTTCAGCAGC TTCCTTACCATCGCATCTTCATCATGTTGCTGTTGGAATTAAATGCTCCTGAGCATGTGTTGGAGACCATCAACTTCCA GACGCTCACAGCTTTCTGTAACACATTTCACATCCTGAGGCCTACAAAAGCTCCAGGTTTTGTTTATGCCTGGCTGGAA CTGATCTCCCATCGGATATTTATTGCAAGAATGCTGGCACATACACCACAGCAGAAGGGTTGGCCTATGTATGCCCAGT TACTGATCGATCTTTTCAAGTACTTGGCTCCTTTTCTCAGAAATGTGGAACTCACCAAACCTATGCAAATTCTTTACAA GGGCACTCTGCGTGTGTTGCTGGTCTTGTTGCATGATTTCCCAGAATTTCTTTGTGACTACCATTATGGGTTCTGCGAT GTCATCCCACCTAACTGTATTCAGTTAAGGAATTTGATCCTGAGTGCCTTCCCACGGAACATGAGGCTTCCAGACCCTT TCACCCCCAATCTGAAGGTGGACATGTTGAGTGAAATTAATATTGCTCCACGAATTCTCACCAATTTCACGGGAGTGAT GCCACCTCAGTTCAAGAAAGACTTGGATTCCTATCTCAAAACCCGATCTCCAGTCACTTTTTTGTCTGACTTGCGCAGC AACTTACAAGTATCAAATGAACCTGGCAACCGCTACAACATCCAGCTGATTAATGCCCTGGTGCTCTACGTAGGTACTC AGGCTATTGCGCACATCCACAACAAAGGCAGCACACCCTCCATGAGCACCATTACCCACTCAGCACACATGGACATCTT CCAGAATTTGGCAGTGGACCTGGACACCGAAGGTCGGTACCTCTTCCTGAATGCAATTGCCAATCAGCTGCGATACCCC AACAGTCATACCCACTACTTCAGCTGCACCATGCTTTACCTGTTTGCAGAGGCCAACACTGAGGCTATCCAGGAGCAGA TCACAAGGGTTCTCTTGGAACGACTGATTGTAAATAGGCCTCATCCCTGGGGTCTCCTCATTACTTTCATCGAGCTGAT AAAAAACCCAGCATTTAAGTTCTGGAACCATGAATTTGTTCACTGCGCTCCAGAAATTGAGAAGTTGTTCCAGTCGGTT GCACAGTGCTGCATGGGGCAGAAGCAAGCCCAGCAAGTAATGGAGGGGACTGGTGCCAGTTAGATGAGCTGCATCTTGT GTTGTAAATGTGCCAGCCTGGAGGCCCCTGTCCCATCGACCGACAGAAGCATCTGTAAGGCTCCTCCTGACCTTCCCAG CTCCCTCGATTGGGTACACGCAACCGACCTGGGGTGAAAGTCTGTGGGCACGTTCCAAAGTTTGAAACAAATTTGTGAC TTTTGGCCAAAATTCAGAAGATGCTGTGAATATCATTTTGAACTAGTGTAAATACAAGGAACAGAAACGTTTGTCTGGA CTTCTGGGTTTGTGCAAAGTGTGTAAAAGGCAAGTGGGTAACTGGTGCCTGTCCAGCTTGTAATAAAGGGGCAGCTGCT GATGCCAAGTGCTTGTCTGGGGCAGACCTCCTTGTCCTGACATTGCCAGACTCCCAAAGAATATTGAAAAGCCAGTTAT ATTATTATGTAACTTATTTTTTTCTTTATGTGGATGGGGGACCTTTAAATCACTAAGTTGTTTTACAGAAAAAGAAAAG TGGATATGTTTGGAATATGGGAATACTATGGAGTAAGGGAGGGGAGGGCGAGGGAGGGACTGAAGATTCAGCATTGTTT TCCCCTTTCCTCCCAGTGCTGACGGAGCCGTGTGGCAGTCAGAACGCCTCCTTTCTGTGGGAGAAGACACGCCTCAGGC CCTTTGGGAGAGGGTCAGCTGTTTTTAGTAAAGAAACCAGAGACCAGGCCTATAGCTTTT

Stage

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Location (click to highlight)

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1-3

stage 3

Area Pellucida

Hensen's Node

4-6

stage 4

stage 5

stage 6

Head Process

Hensen's Node

Notochord

7-12

stage 7

stage 8

stage 9

stage 10

Head Process

Hensen's Node

Notochord

13-17

stage 17

Notochord

Pineal Gland

Probe 2

GEISHA Id	Not.Levin.1995
	NCBI	Ensembl
Gene Name		CNOT1
Gene Description		CCR4-NOT transcription complex, subunit 1 isoform a [Source:RefSeq_peptide;Acc:NP_057368]
Ensembl Genome Map	contig view
Citation	Levin M, Johnson RL, Stern CD, Kuehn M, Tabin C (1995). A molecular pathway determining left-right asymmetry in chick embryogenesis. Cell. 1995 Sep 8;82(5):803-14.
Comments	Probe designed as per: Stein,S. and Kessel,M. et al. [1995]
Complete Sequence	show CCCGCTGGGCCCTGCTGTGCTGTGGAGGTCTGGAGGGCCCTGCAAAATGAAGAGAGTGCGCACAGTCTTCAAACCGGAG CAGTTGGAGAGGCTGGAGCAAGAGTTCCTCAAGCAGCAGTACATGGTGGGCACAGAGCGAGTGGACCTGGCTGCAACGC TGCGTCTCACAGAGACCCAGGTGAAAGTCTGGTTCCAGAACCGGAGGATCAAATGGAGGAAGCAGAGCATGGAGCAGAA GAAGGCAAAGCTGTCACAGTTTGGGGTGATACAGCCCACCTCTGCTGGCCCCACGGATGTCAAGGAGCATGAGGAGGAC ACAGTGGAGGTTGAGCTTTGAGCAGCTGATGGGATGCAGCTGCCACTGTTGTTTTTGCAGCCACGCCTGCCTGATGGAG GTACTGGGGATGCAGGCACATCTGTGCTTGCTTTGTCCAAGCTAGACTTGAAGTTCTTGCTCTGAGAGTTTTGAGCTAC AGAACTAAACTGCCATTGGGTGGGAAGAAGCATCCAAAAGTGTAGAGACCCCTATTTGGTAACCGGTGCTGTAACTCTT GGTCTTGATGGTGCCATCGTTGTGGCAAAGCATGTGATCTCATTTGCTCTCAAAGTGCTAGGAAGCACAGTTTCCAATA GAGAGGCTGGGGTGGCGGTCAGACGGTGTCTCTGATGGCAGTGAGCATGGCAGCATCTGAACATGGGGTCACTCGTGTT TCAGGTGACTGTGTGCTCCTACGAGGGAGAGCTGTGCTGGGAGGAGATTTGCCTCTGATGGTTTCTCCTGGTCGTCTTG ATTCCCATGTTGGATGCTGAGATCACAACGACAACAAAGTGAAAACTGAAAAGTCAAAAAAAAAAAAAAAAAAAAA

Stage

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Comments (click to highlight)

25-30

stage 4

Hensen's Node

31-44

stage 44

Hensen's Node

Primitive Streak

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