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A chicken embryo gene expression database
 
GEISHA - A Chicken Embryo Gene Expression Database
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Gene Expression Report
GEISHA IdChEST276j2
 NCBIEnsembl
Gene NamePOLR1CPOLR1C
AliasesRNA polymerase I subunit, POLR1C, polymerase (RNA) I polypeptide C, 30kDa, Official 
Gene Descriptionpolymerase (RNA) I polypeptide C, 30kDaDNA-directed RNA polymerases I and III subunit RPAC1 (RNA polymerases I and III subunit AC1) (DNA-directed RNA polymerase I subunit C) (DNA- directed RNA polymerases I and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40) (AC40). [Source:Uniprot/SWISSPROT;Acc:O15160]
Gene Ontologyshow
GO:0003677 DNA binding IEA
GO:0003899 DNA-directed RNA polymerase activity IEA
GO:0005634 nucleus IEA
GO:0006350 transcription IEA
GO:0046983 protein dimerization activity IEA
NCBI Nucleotide HitXM_419502 show details
scoreevaluealignment lengthdescription
9430.0943PREDICTED: Gallus gallus polymerase (RNA) I polypeptide C, 30kDa, transcript variant 2 (POLR1C), mRNA
Ensembl Genome Map
contig view
5' Sequenceshow
CCTTCCGGCGGCGATGGCGGCCAAGAGGAGCATGGACGAGTTGAGGGAGCGCGTGGTGCTGGGCGAGTTCGGCGTCCGC
AACGTCCACACCACCGACTTCCCCGGCAACTACCCCGGCTACGACGACGCGTGGGACCAGCGGCGCTTCGAGGAGGCGT
TCCGCGTGGACGTGGTGCGGGAGGAGGACGGCGTGCTGGAGTTCGACATGGTGGGCATCGACGCGGCCATCGCCAACGC
CTTCCGCCGCATCCTGCTCGCCGAGGTGCCAACGATGGCTGTGGAGAAAGTGTTTGTGTACAACAACACGTCCATCGTG
CAGGATGAGATCCTGGCGCACCGCCTGGGCCTTATCCCCATCCGGGCCGACCCTCGACTCTTTGAGTACAGGAATCAAG
GAGATGAAGAGGGGACAGAAATTGATACTCTGCAGTTTCAGCTGAAAATAAAATGCAGCCGGAATCCTCAGGCAGCCAA
GGAATCATCTGACCCAAATGAACTGTATTTCAATCACAAAGTGTACAGTAAGCACATGACATGGGTGCCCTTGGGGAAT
CAGACAGACCTCTTTCCGGATGCTGACTTCCGACCTGTCCATGATGACATCCTCATAGCACTGTTGCGACCTGGGCAGG
AAATAGATGTGCTCATGCACTGTGTCAAGGGCATAGGTAAAGATCATGCCAAGTTCTCTCCTGTGGCCACAGCTAGTTA
TCGACTGCTTCCTGACATTACTCTCCTGCAGCCTGTTGAGGATGAGGCAGCCGAGACGTTACAGAAGTGCTTTTCCCCT
GGAGTCATTGAGATCCAGAACATCAAGGGAAAAAAGGTGGCAAGAGTAGCCAACGCACGGTTGGACACATTCAGCAGGG
AAGTCTTCCGACATGAGGGTCTGAAAAACCTTGTGCGCCTGGCAAGAGTGCGAAATCATTACATCTTTTCAGTGG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 3

Epiblast

 
13-18
stage 16

Mesoderm

Widespread Expression

 
19-22
stage 20
stage 22
stage 22

Dermatome

Face Mesenchyme

Leg Mesenchyme

Paraxial Mesoderm

Pharyngeal Arches and Clefts

Renal

Widespread Expression

Wing Ectoderm

Wing Mesenchyme

hand transected

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