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A chicken embryo gene expression database 		 
GEISHA - A Chicken Embryo Gene Expression Database
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Gene Expression Report
GEISHA IdCathepsinB.Zuzarte-Luis.2007
 NCBIEnsembl
Gene NameCTSBCATB_CHICK
AliasesCTSB, cathepsin B, Official 
Gene Descriptioncathepsin BCathepsin B precursor (EC 3.4.22.1) (Cathepsin B1) [Contains: Cathepsin B light chain; Cathepsin B heavy chain]. [Source:Uniprot/SWISSPROT;Acc:P43233]
Gene Ontologyshow
GO:0005764 lysosome IEA
GO:0006508 proteolysis IEA
GO:0050790 regulation of catalytic activity IEA
show
GO:0004197 cysteine-type endopeptidase activity IEA
GO:0004213 cathepsin B activity IEA
GO:0005739 mitochondrion IEA
GO:0005764 lysosome IEA
GO:0006508 proteolysis IEA
GO:0008233 peptidase activity IEA
GO:0008234 cysteine-type peptidase activity IEA
GO:0016787 hydrolase activity IEA
GO:0050790 regulation of catalytic activity IEA
NCBI Nucleotide HitNM_205371 show details
scoreevaluealignment lengthdescription
5460.0546Gallus gallus cathepsin B (CTSB), mRNA
Ensembl Genome Map
contig view
CitationZuzarte-Luis V, Montero JA, Torre-Perez N, Garcia-Porrero JA, Hurle JM. Cathepsin D gene expression outlines the areas of physiological cell death during embryonic development. Dev Dyn. 2007 Mar;236(3):880-5.
CopyrightCopyright © 2007 Wiley-Liss, Inc.
CommentsAuthors said: For in situ hybridization, antisense probes for cathepsin D, B, and L (Zuzarte-Luis et al.,[2007]), for cCatB—fwd: 5′-ACT GAC ATG AGC TAT GTG AAG-3′ and rev: 5′-GTA GGA TGT GAT GCC GTA GT-3. The probe shown was excerpted from Acc# NM_205371 using these primers.
Complete Sequenceshow
ACTGACATGAGCTATGTGAAGAAGCTCTGTGGCACTTTCCTGGGTGGACCCAAGGCTCCTGAAAGGGTAGATTTTGCTG
AGGATATGGATTTGCCGGATACCTTTGACACGCGGAAGCAATGGCCAAATTGCCCCACCATCAGCGAGATCAGAGACCA
GGGCTCCTGTGGCTCTTGCTGGGCTTTTGGTGCTGTGGAAGCGATTTCGGACAGAATCTGTGTTCACACCAACGCCAAG
GTGAGCGTGGAGGTGTCGGCGGAGGATTTGCTGTCATGCTGTGGCTTCGAGTGCGGCATGGGGTGCAATGGTGGTTATC
CTTCTGGTGCATGGAGGTACTGGACAGAGAGGGGCCTCGTGTCTGGGGGTCTCTATGACTCCCATGTGGGCTGCCGGGC
CTACACCATCCCACCCTGTGAGCACCACGTCAATGGCTCCCGGCCACCTTGCACTGGGGAGGGAGGAGAAACCCCCAGG
TGCAGCCGGCACTGTGAACCTGGCTACTCGCCTTCCTACAAGGAGGACAAGCACTACGGCATCACATCCTAC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 30

Leg

 
31-32
stage 32
stage 32

Leg

 
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