GEISHA - A Chicken Embryo Gene Expression Database
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OTP
orthopedia homeobox

Gene
Official SymbolOTP
Official Full Nameorthopedia homeobox
CGNC ID
also known ashomeobox protein orthopedia
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_002188816
PolypeptideXP_002188852
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene100231196
Ensembl Gene
KEGGtgu:100231196
GEISHA IdOTP.Alonso.2020Data SourcePublication
Complete cDNA Template Probeshow
ATTGAAGTGTTAAGCACCTCCCCGTCTCTCTAAAGGACATTATAATGCAAGAGACCCCCTTTTTAACCACACACCGAAT
TTTCTTTCATTTAGGCGATCTATATATATCTATATCTTATATCTTATATCTATTTTAAATAACTTAAGGCCGCTAAAAT
TTGGGGGGGAACAGCCTTCGCCCTGGAGCGGTGCGCGATGCTGTCTCACGCCGACCTCCTGGACGCCCGTCTCGGGATG
AAAGATGCGGCCGAGCTGCTGGGACACCGGGAGGCGGTGAAGTGCCGGCTGGGCGTGGGGGGCTCGGATCCGGGGGGTC
ACCCGGGAGACATGGCCCCGAACTCGGACACGGTGGAAGGGACCACCCTGCTGCCGGGGGAGGACATCACCACGGTGGG
ATCCAATCCCAGCTCCTTGGCCGTCAGCGCCAAAGACGCCGACAAGCAGCAAGGCCAGCAGGGCGGCCAGAACCCCAGC
CAGGCGGGACAGCAGCAGGGCCAGCAGAAGCAGAAGCGGCACCGCACCCGCTTCACGCCGGCGCAGCTCAACGAGCTGG
AGAGGAGCTTCGCCAAGACCCACTACCCGGACATCTTCATGCGGGAGGAGCTGGCCTTGCGCATCGGCCTCACCGAGTC
CCGGGTGCAGGTGTGGTTCCAGAACCGCCGGGCCAAGTGGAAGAAGCGCAAGAAGACGACCAACGTCTTCCGAGCCCCG
GGCACGCTGCTGCCGACGCCGGGGCTGCCGCAGTTCCCCTCGGCCGCCGCCGCCGCCGCCGCCGCCATGGGCGACAGCC
TCTGCTCCTTCCACGCCAACGACACGCGCTGGGCCGCCGCCGCCATGCCCGGGGTGTCGCAGCTGCCGCTGCCGCCGGC
GCTGGGCAGGCAGCAGGCCATGGCGCAGTCCCTGTCCCAGTGCAGCCTGGCGGCCGGGCCGCCGCCCAACTCCATGGGG
CTCTCCAACAGCCTTGCGGGCTCCAACGGCGCCGGGCTGCAGTCGCACCTCTACCAGCCCGCCTTCCCCGGCATGGTGC
CCGCCTCGCTGCCCGGCCCCAGCAACGTGACGGGCTCGCCGCAGCTCTGCAGCTCCCCGGACAGCAGCGACGTGTGGCG
GGGAACCAGCATCGCCTCCCTCCGCCGCAAAGCACTAGAGCACACAGTCTCCATGAGCTTCACCTAATGGCCGCCGCCC
CGCGCCGCCGCCGCCGCCGCCGCCGCCTCGCCCCGCGCCCCCGCTTCGCCCGCCCCCGCCCCCGTC
CitationAlonso A, Trujillo CM, Puelles L. Longitudinal developmental analysis of prethalamic eminence derivatives in the chick by mapping of Tbr1 in situ expression. Brain Struct Funct.  2020 Mar;225(2):481-510. Epub 2020 Jan 4. DOI: 10.1007/s00429-019-02015-3.
Copyright© Springer-Verlag GmbH Germany
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (XM_003642956.4).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 30
Forebrain
MA, medial amygdala
all
 
  

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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