GEISHA - A Chicken Embryo Gene Expression Database
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SOX21
SRY-box 21

Gene
Official SymbolSOX21
Official Full NameSRY-box 21
CGNC ID
also known asCH31, transcription factor SOX-21|SRY-related protein CH31|Transcription factor SOX-21
gene typeunknown
Genomic Map
 Ensembl ID not known
NCBI
Gallus-Browse
Sequence Information
Genomic
RNA
Polypeptide
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
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Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene107051027
Ensembl Gene
KEGG
GEISHA IdSOX21.Uchikawa.2011Data SourcePublication
Complete cDNA Template Probeshow
GTGAGCGCGGCGCCCCGGGGCCCCCGCAGCGCCCGAGCCGCCGCCGCCGCCGCCGCCGGCCCCGCAGCGCGCTCCGCGG
GCGGCCATGGCTGCGGGCGGCCGCTGACCGCCGCCCCGTCGAGGACGAACCCTGGCCCGGCGGGCGGCGGCGCGGAGAG
AGGCTCCGAGGCGGGTACCGGCACCCGTCCCGCCCGCAGCGCCCCGCGCCCGGAGCCGCCGAGATTGACTGGGGCGGAG
CGGAGCGCGGCGCGGCCGCGGAGCCGGAGCCGGAGCCGGAGCCGGCCGAGGAGGAGGAGTGCGGGCGGCGGGACACCAT
GTCCAAGCCGGTGGACCACGTCAAGAGACCGATGAACGCTTTCATGGTGTGGTCGCGGGCGCAGCGGCGGAAGATGGCC
CAGGAGAACCCCAAGATGCACAACTCGGAGATCAGCAAGCGGCTGGGCGCCGAGTGGAAGCTGCTGAGCGAGGCGGAGA
AGCGGCCCTTCATCGACGAGGCCAAGCGGCTGCGGGCCATGCACATGAAGGAGCACCCCGACTACAAGTACCGGCCGCG
CCGCAAGCCCAAGACGCTGCTCAAGAAGGACAAGTTCGCCTTCCCCGTGCCCTACGGGCTGGGCGCCGTGGCCGAGCAC
GAGCCCCCGCACGGGCTGAAGGCGGCGGCGCTGCACGGCGGGGCTGCGGGCGGGCTGGGGCCCGACTCGCTGCTGGGCA
ACCCCGAGAAGGCGGCCGCCGCCGCCGCCGCCGCCGCCGCGCGCGTCTTCTTCCCGCAGTCGGCCGCCGCCGCGGCCGC
CGCCGCCGCCGCCGCCGCCGCGGGCGGCCCCTACTCGCTGCTGGACCTGGGCTCCAAGATGGCCGAGATCTCCTCGTCG
TCGTCGGCGGGCTCGGCGCTGCCCTACGCCTCCTCGCTGGGCTACCCCGGCGCCGGCGGGGCGGGAGCCTTCCACGGGG
CCGCCGCCGCCGCCGCCGCCGCGGCCGCCGCCGCCGGGGGGCACACGCACTCGCACCCGTCCCCCGGCAACCCGGGCTA
CATGATCCCCTGCAACTGCAGCGCCTGGCCCGGGCCCGGGCTGCAGCCTCCGCTGGCCTACATCCTCCTGCCGGGCATG
GGCAAGCCCCAGCTGGACCCGTACCCCGCGGCCTACGCCGCCGCGCTATGACCCGCGCTGTGAGCCGCTGCCCCGGGGG
GGGAGCGGGCGGGGAGCGGCGGGGCCGCCGCCGACCTGTTGCGCGCCGCCCCGCCTCGAGCTCGTGTGTGTGTTGCATG
CGGATAGCCGAGCTGAGAGGGAATGAGAAAAAGGGGAAGAAAAAAAAAAAAGACAAAAAAAAAAAAAAAAAAGACCAAA
ACAAAAAAAAAACCCCAACCTCCCCCCACCCCCCCTCCCCCCTTCCTTCCCCCTCCCGTCCGTCCCCTCGAAAAGTGCT
TCCTCGGGGACGTGGGCTCGGGAAGGGCCGCGCGGGGATGCGGCGTTCCCCCGGGACGGTTCCCTACGGGGGCAGCGGT
TGAGGCGGTGCCGCTCCGCTCCGGGGGTGTCAGCCCGGGACTGTACATGTGTCAATGTCTGTGGCAACGTTAGGTCTCG
GATCGGAAAGTCTGTCGCTTCCTTTGCCCACGGTCGAGTCGGTTTGAAGCTGAAGAAAAAGGGAAAGAAAAGAAAAAAA
AAAAAA
CitationUchikawa M,Yoshida M, Iwafuchi-Doi M, Matsuda K, Ishida Y, Takemoto T, Kondoh H. B1 and B2 Sox gene expression during neural plate development in chicken and mouse embryos: universal versus species-dependent features. Cell Growth Differ 2011 Aug;53(6):761-71.. null.
Copyright© 2011 Japanese Society of Developmental Biologists.
CommentsInsufficient information is provided in publication to verify exact sequence used to synthesize probe; the full length RNA sequence is shown (acc NM_001396674).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
Neural Plate/Tube
Prospective Neural Plate Ectoderm
7-12
stage 7
stage 8
stage 9
stage 9
stage 10
stage 11
stage 12
Ear/Otic Placode
Neural Plate/Tube
Posterior Neural Plate
13-18
stage 13
Diencephalon
Neural Plate/Tube
Rhombomeres
 
19-20
stage 20
stage 20
stage 20
  

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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