Geisha

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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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ACHE
acetylcholinesterase (Cartwright blood group)

Gene

Official Symbol	ACHE
Official Full Name	acetylcholinesterase (Cartwright blood group)
CGNC ID	49783
also known as	acetylcholinesterase\|LOW QUALITY PROTEIN: acetylcholinesterase\|acetylcholinesterase (Yt blood group)
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC

Sequence Information

Genomic
RNA	NM_205418
Polypeptide	NP_990749

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish

Gene Ontology

Molecular Function	acetylcholinesterase activity, cholinesterase activity
Biological Process	choline metabolic process, neurotransmitter catabolic process, regulation of axonogenesis, more...
Cellular Component	axon, cell junction, cell surface, dendrite, endoplasmic reticulum lumen, extracellular space, more...

Links to other databases

Entrez Gene	396388
Ensembl Gene
KEGG	gga:396388

Entry 1

GEISHA Id	ACHE.Agarwala.2002	Data Source	Publication
Complete cDNA Template Probe	show GGCCAAAGGGCACGACGGAGCCCCCCGCGATGGCGCCTCTCTTCCTCCTCCTCCTCCTCCTCCTCTCCCCCTCCCCGAC TTCCGCCCACCGATTTGCCTACAGCGCCCCCAACCGCCCGGAGGTCCGCACCACCACCGGCTCCGTCCGCGGCCTTTTG ATCCCCGCCGGCCCATCGGGTTCGACGGCCGCCGCCTTTTTGGGGATCCCATTCGCCGTCCCCCCTTTGGGACCCCTCC GTTTCCGTCCCCCTCTCCCCATCCCGACCCCATGGACCGGCATCCGAGACGCCGATTCGCAACCCTTTGCCTGCTATCA GATGGTAGACACCACCTTCCCGGGTTTCCAAGGCTCCGAGATGTGGAACCCCAATAGGGAAATGAGCGAGGATTGCCTT TACCTCAACGTGTGGACCCAAAAAGGCGACCCTACAGAGCCCCCCGTTTTGGTGTGGATTTACGGGGGGGGTTTTACAG GCGGTTCGGTGTCTTTGGACGTTTACGACGGGCGCTATTTGGCCGCGGCTGAGGAGGCGGTGGTGGTGTCCATGAATTA TAGGGTGGGCTCTTTGGGGTTTTTGGCCTTAGCGGGTCATAGGGACGCTCCGGGCAATGTGGGTTTATGGGATCAACGT TTGGCCCTGCAATGGGTTCGGGATAACGCGGAGGCGTTCGGAGGGGACCCCGATTTGATCACTTTATTCGGGGAGAGCG CCGGGGCCGCCTCGGTGGGTTTTCACCTCTTATCGCCCCATAGCAAAGGGTTGTTCCGTAGGGCCGTCCTACAGAGCGG ATCCCCCAACGGGCCGTGGGCCACTATAGGGGCGGCGGAAGGGAGGAGGAGGGCGGCGGCTTTGGGGAGGGCCGTGGGG TGCCCTTATGGGAACGAGACGGAGTTTTTGGGGTGCTTAAGGGGGAAGGAGGCGGCGGACGTGTTGGAAGGGGAAGGGG TGGTGATGCCGCCCCAAAGCGTCTTTAGGTTCGCTTTCGTGCCCGTGGTGGACGGGGATTTCGTGGTCGATAGCCCCGA TGTGGCGTTGTGGGGGGATTATGGGGTGAAGGGGGGGGAGGGCGGTCACGGGGTCGAGGGGGGGGACGGGGGTTATGGG GTGAAAGGGGGGGATGGGGTGAAGGGGGGTTATGGGGGGGGTTATGGGGCCAGGGGGGTGAGGGAGGGTGATGGGGATG GGGGTTATGGGGTGAAGGAGGGGCTCAGGGAGGGTTATGGGGTGAAGGAGGGTTATGGGGTTGAGGGTGATGGGGCGAA TGCTTATGGGGCCAGGGTGCCCCCCAGACCCCACAGAGACGAGACACCGCCCGATGCTTATGGGGCCAAGGGGTCAGCC GATGCTTATGGGGCCAAGGCAGCCCCCAGACCCCATAGGGACGAGACATCCCCCGACGCTTACGGGGCCAAAATGCCCC CCAGACCCCACAGAGACGAGGCGTCTCCCGACACTTATGGGGCCAAAATGCCCCCCAGACCCCATAGGGACGAGACATC CCCCGACGCTTATGGGGCCAAAATGCCCCCCAGACCCCATAGGGCTGGCGGGGAGGTGGAGGTGCTTTTGGGGGCCGTC AGGGTCGAGGGTTCCTATTTCCTGGTCTATGGGGTCCCCGGCTTCGGGAAAGATAATGAAAGCCTCATCAGCAGGGAGG AGTTTTTAGGGGGGGTCCGCATGGGGGTCCCCCAAGCGACCGAATTGGCGGCTGAGGCCGTGGTGCTTCATTACACCGA TTGGTTGGACGCCGATAACCCCGTGAAGAACAGGGAGGCTTTGGACGACATCGTGGGGGACCACAACGTGGTTTGCCCC CTGATGGCCTTCGCCCAACGTTGGGCTCAGAGGGGGGGGAAGGTTTACGCTTATCTGTTCGACCACCGCTCCTCCACCC TATTGTGGCCTTCGTGGATGGGGGTCCCCCACGGTTACGAGATTGAGTTCGTCTTCGGGCTGCCTCTGGAGCCCAGAAA TAATTACACCAGGGAGGAGGTGGAGCTGAGCCGGAGGATCATGCGCTACTGGGGGAACTTCGCCCGCACGGGGGACCCC AATGGGGGGGTGGGGGGCCCCCGCTGGCCGCCCTACACACCATCGGGGCAGCGCTACGCCCACCTGAACGCCCGACCCC TTTCTGTGGGGCACGGCCTGAGGACGCAGATCTGCGCCTTCTGGACCCGCTTCCTGCCCAAGCTGCTCAACGCCACCGG TCCCCCGGAGGACGCTGAGCGCGAATGGCGCCTGGAGTTCCACCGCTGGAGTTCCTACATGGGCCGCTGGAGGACCCAA TTCGAGCACTACAGTCGGCAGCAGCCCTGCGCCACCCTGTGAGCGGCCACGGAGACACCCCCAGGGACCCCAACAACAC CCCAGGGACCCCAACAACACCCCCAGGGACCCCAATACCCTGGAGGACCCCAACAACAACCCCAGGGTCCCCAACAACA CCCCCAGAGGACCCGCAACAACACCCCGAGGGACCCCAACAACACCTGGAGGACCCCAACAACAACCCCAGGGTCCCCA ACAACACCCTCAGAGGACCCCAACTAACAACCCCAGGGTCCCCAACAACAACCCCAGAGGACTGCAACAACACCCCGAG GGGCCCCAACAACATCCCCAGGGTCCCCAACAACACCCGGAGGGACCCCAAGGGGCCCCAACAACACCGGGAGGGTCCC CAACAACACCGGGAGGGTCCCCAATACCCCCAGGGACTCCAACAACACCCGGAGGTGTCACCAACAACACCCGGAGGAC CCAACAACACCCAGAAGGACCCCAACAACACCCGGAGGGACCCCAGCAACACCTGGATGTGTCACCAACAACACCCAGA GGACCCCAACAACAACCCCAGGGTCCCCAACAACACCCCGAGGGACCCCAAGGAACCCCAACAACACCCTGAGGGATCC CAACAACACCCCCAGGGACCCCAATACCCTGAGGGACCCCAGCAACACCCCCAGGGACCCCAATACCCGGAGGGACTCC AGCAACACCTGGAGGACCCCAACAACACCGGAGGGACCCCCAAAACACCTGGAGGTGTCACCAACAACATCTGGAGAAC CCCAACAACACCCAGAAGGACCCCAACAACAACCCCAGGGACCCCAATAACACCCCCAGGGTCCCCAATACCCTGAGGG ACCCCAACAACACCATGAGGGACCCCAGCAATACCTGGAGGTGTCACCAACACCATCATCAACACCGGAGGGTCCCCAG CAACACCCCGAGGGACCCCAATACCCTGAGAGACCCCAGCAACACCTGGAGGACCCCAACAACAACCCCAGGGACCCCA ACAACACCCTGAGGGACCCCAACAATACCTGGAGGTGTCACCAACAGCACCTGGAGAACCCCAACAACACCCGGAAGGA CCCCAACACCCCCAGGGATCCCAACAACAACTCCAGGGTCCCCAACAACACCTGGAGGACCCCAACAACACCGGAGGGG TCCCCAACACCCGGAGGTGGCCCCAACAACACCCGGAGGACCCCAACAACACCCTGAAGGTCCCCAGCAACACCCGGAG GGACCCCAACAACACCCGGAGGGGTCCCCAACACCCGGAGGGGTCTCCAACACCATCTCCAACACTGGGAGGGTCCCCA ACAACACCTGGAGGACCCAACAACACCCTGAAGGTCCCAACAACACCGGAGGTACCCAACAACACCCAGAGAGGTCCCC AACACCGGAGGGGTCCCCAACACCCACAACTGTCCCCACCAACACCGGAGGGGTCCCCCACAACACCGGAGGGGTCCCC AACACCGTCACCAACACCCGGAGCTGTGATTGTCGCAGAGCGCCCCATAGAGCCCCATAACCACCCCATAGGCACCCCA TAGGGGCCCATAAGCACCCTATATGGTCTCGTATCCACCCCATAGTGTCCCACAGCGTCCTATAACCACCCCATACCCA TCCCATACTGCCCCCCCCAGTGCCCCATAGCCACCCCATTTCCCCCCAATACCCACCCCATGGTGCCCCACAGTGCCTC ATAGCCACCCCATAGCACCCCATAGCCACCCCATAGCACCCCACAGCGCCCCATAACCACCCATAGGGTCCCATACCCA CCACGTACCGCCCCACAGTGCTCCATAAGCACCCCATAGAGCCCCATATCCACCCCATAAGCCTCACAGCGCCCATAAC CACCCCATAGCGCCCACAGCGCCCATATCCACCCCATAGCACTCCACAGTGCCCCATAACCACCCATAGGGCCCCATTC CCACCCACAGGGCCCCACAGCGCCCCACAGTGCCCCATAACCACCCCATATGCACCCCGTATCCACCCCATAGCGCCCC ACAGTGCTCCATTCCCACCCCCATAGCGCCCCACAGTGCTCCATTCCCACCCCATAGTGCGCCACAGCGCCCCATAACC ACCCCATATGCACCCCATAGCGCCCCCATAGTGCCCCACAGGCGGAGCTCTGACGGTGCCCCCACCACCCCCAGCCGTG GCTGTTGTGACACCCCAATAAAGACTGAACTGA
Citation	Agarwala S, Ragsdale CW. A role for midbrain arcs in nucleogenesis. Development. 2002 Dec;129(24):5779-88.
Copyright	Published by The Company of Biologists 2007. This material is protected by a copyright retained by the authors. Permission granted by Dr. Ragsdale.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc# NM_205418.1).

Stage

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25-26

stage 26

Isthmus/MHB
Midbrain

double labeled with ISL1
double labeled with PHOX2A

Entry 2

GEISHA Id	ACHE.Sanders.2002	Data Source	Publication
Complete cDNA Template Probe	show `AACCCTTTGCCTGCTATCAGATGGTAGACACCACCTTCCCGGGTTTCCAAGGCTCCGAGATGTGGAACCCCAATAGGGA AATGAGCGAGGATTGCCTTTACCTCAACGTGTGGACCCAAAAAGGCGACCCTACAGAGCCCCCCGTTTTGGTGTGGATT TACGGGGGGGGTTTTACAGGCGGTTCGGTGTCTTTGGACGTTTACGACGGGCGCTATTTGGCCGCGGCTGAGGAGGCGG TGGTGGTGTCCATGAATTATAGGGTGGGCTCTTTGGGGTTTTTGGCCTTAGCGGGTCATAGGGACGCTCCGGGCAATGT GGGTTTATGGGATCAACGTTTGGCCCTGCAATGGGTTCGGGATAACGCGGAGGCGTTCGGAGGGGACCCCGATTTGATC ACTTTATTCGGGGAGAGCGCCGGGGCCGCCTCGGTGGGTTTTCACCTCTTATCGCCCCATAGCAAAGGGTTGTTCC`
Citation	Sanders TA, Lumsden A, Ragsdale CW. Arcuate plan of chick midbrain development. J Neurosci. 2002 Dec 15;22(24):10742-50.
Copyright	Copyright © 2002-2011 by the Society for Neuroscience
Comments	The probe U03472 was used because it was specified by the authors in the article.