GEISHA - A Chicken Embryo Gene Expression Database
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CAPN5
calpain 5

Gene
Official SymbolCAPN5
Official Full Namecalpain 5
CGNC ID479
also known ascalpain-5, calpain-5
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
Sequence Information
Genomic
RNAXM_417278
PolypeptideXP_417278
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human726ENSG00000149260MIM:602537
Mouse12337ENSMUSG00000035547All phenotypic alleles (4):Targeted, other(4) MGI:1100859
Xenopus448405, 380502947202
Zebrafish563346, 100006332ENSDARG00000069717, ENSDARG00000069748ZDB-GENE-061103-214, ZDB-GENE-091116-29, ZDB-GENE-091116-29ZFIN:ZDB-GENE-061103-214, ZFIN:ZDB-GENE-091116-29, ZFIN:ZDB-GENE-091116-29
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene419086
Ensembl Gene
KEGGgga:419086
GEISHA IdCAPN5Data SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGCTGGATGTGGTAATAGATGACCG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGTCTTATGGATGCTGAGGTAGGACGcDNA Template Length665
Complete cDNA Template Probeshow
GCTGGATGTGGTAATAGATGACCGCCTGCCCACGCTCCACAACCAGCTCATCTACTGCCACTCCAACTCCAAGAATGAG
TTCTGGTGTGCCTTGGTGGAGAAGGCTTATGCCAAGTTGTCAGGATGTTACGAGGCCCTGGATGGAGGCAACACAGCTG
ATGCTCTGGTAGACTTTACTGGTGGGGTCTCTGAACCTATCGACCTGACTGAAGGGGACTACACCACTGATGAAGCCAA
ACGAAACCTCCTCTTTGAGCGTGTGTTGAAAGTGCACAACCGTGGAGGCCTCATCAGCTGCTCCATCAAAGCTATGTCA
GCAGCAGACATGGAGGCCCGCCTGGCCTGTGGGCTGGTGAAGGGCCATGCGTACGCTGTGACTGATGTGCGGAAGGTCC
GCCTGGGCCACGGCCTGCTGTCTTTCTTCAAGTCAGAGAAGCTGGACATGATCCGCATGCGCAACCCATGGGGTGAACG
AGAGTGGAACGGCCCTTGGAGTGATACCTCTGAAGAGTGGCAGAAAGTGAGCAAAAGTGAAAGAGAGAAGATGGGAATG
ACAGTAGAAGATGATGGCGAATTCTGGATGACCTTTGAAGACTTCTGTAGATACTTCACAGACATCATCAAGTGCCGTC
TCATCAACACGTCCTACCTCAGCATCCATAAGA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 8
stage 9
stage 11
Anterior Intestinal Portal
Intermediate Mesoderm
Unlabeled
 
13-18
stage 18
Heart
 
19-24
stage 19
stage 19
stage 24
stage 24
stage 24
stage 24
stage 24
stage 24
Amnion
Aorta
Foregut
Head Mesenchyme
Liver
Lung
Mesonephros
Notochord
Outflow Tract
Sclerotome
Sinus Venosus
Spinal Ganglia and Nerves
Ventricles
 
25-26
stage 25
stage 25
stage 26
Foregut
Head Mesenchyme
Leg Mesenchyme
Liver
Lung
Mesonephros
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Spinal Ganglia and Nerves
Ventricles
Wing Mesenchyme
 

Mouse

Emage
MGI GXDMGI:1100859

Frog

Xenbase947202

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-061103-214, ZDB-GENE-091116-29, ZDB-GENE-091116-29
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