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Chicken Stage Series
CD44
CD44 molecule (Indian blood group)
Gene Summary
Expression
Other Species Expression
JBrowse
Gene
Official Symbol
CD44
Official Full Name
CD44 molecule (Indian blood group)
CGNC ID
5938
also known as
CD44 antigen|CD44-like protein
gene type
protein-coding
Genomic Map
Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNA
NM_204860
Polypeptide
NP_990191
Gene Expression
In Situ Hybridization
GEISHA
Orthology
Entrez Gene
Ensembl Gene
Genetic Phenotypes
MOD
Fruit Fly
Human
960
ENSG00000026508
MIM:107269
Mouse
12505
ENSMUSG00000005087
MGI:88338
Xenopus
394545
,
443701
487546
Zebrafish
100330801
ENSDARG00000089892
ZDB-GENE-110429-1
,
ZDB-GENE-110429-2
ZFIN:ZDB-GENE-110429-1
,
ZFIN:ZDB-GENE-110429-2
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene
395666
Ensembl Gene
ENSGALG00000007849
KEGG
gga:395666
Entry 1
GEISHA Id
CD44.Roddy.2011
Data Source
Publication
Complete cDNA Template Probe
show
CATTCAAAGTCTGCCAGTAAAAGCAAAAAGTGACATTTTGTAATGATTGATGACTTGGTCTGTAACAAGAGAAACCCAG
AAGGACAAAGTTTATTTATCTATATTTTAAAATGTCTGTGGGCATACAGCAGGATTTTTTGGGAGGGG
Citation
Roddy KA, Prendergast PJ, Murphy P. Mechanical influences on morphogenesis of the knee joint revealed through morphological, molecular and computational analysis of immobilised embryos. PLoS One. 2011 Feb 28;6(2):e17526.
Copyright
PLoS One is an open access journal.
Comments
The cDNA template used to generate the probe was obtained from EST - ChEST343m10 as described in the paper
Stage
Image (click image to view full size)
Location (click to highlight)
Comments (click to highlight)
25-27
stage 27
stage 27
Leg
il, intermediate layer
p, patella
Entry 2
GEISHA Id
CD44.Singh.2016
Data Source
Publication
Complete cDNA Template Probe
show
CACAAGGGAGACGGTGAACCTACTTCTTCCCCTGGATTGTCCACAACAACAACTGTAACGTCACAACCAGGGACAGCCC
ATGTACCAGAATGGCTGATCATCGTTGCTGCCCTCCTGGCACTGGCATTGATCCTTGCCGTGTGCATCGCGGTTAACAG
CCAGAGGAGATGTGGGCAGAAGAAAAAGCTAGTCATTAATAATGGCAAAGGTGCAGTGGAGGACAGGAAGACAAGAGAA
TTAAACGGAGATGCCAGCAAGTCACAAGAAATGGTGCACTTGGTTCACAAAGAACAGTCAAATGACCGAACAGGAGCAT
GTGACGAATTCCTCACCGTTGATGAAACACAAAATCATCAGGATGGTGACATGAAGAGTGGAGTGTAGCGGTACGAAGT
CACCAAATAGATCAGTGTTGGGAAAATCAAAGTCACACGGACCTTGGGCAGGAGTTCACAGATGCACTGTGCTACTGAT
GTCTTTTGAACACGATTAAGCTTAAATTTTCTTCATTTTTAATTATTTTGACATGGTGTCCGAGTTACAAAATTGACAT
TTGCTTTCTGAAATAAGCCCCAAGTGTTGCAGTCAGTTCCCAGTTCCTACACAGAGGGCACTTACAGTGTCCTGGGCAT
GTGGCATGTCATTGTTCCCCCAAATGCGGTGCCTTCGCTGTGCGGCAGATACAGAAGCATCCAGTTGCTCCATCTTACA
GGCATTTAAGGTACTAAACTGGTTGTGGTACAACAGTAAGTGAGTAAC
Citation
Singh PN, Ray A, Azad K, Bandyopadhyay A. A comprehensive mRNA expression analysis of developing chicken articular cartilage. Gene Expr Patterns. 2016 Jan;20(1):22-31.
Copyright
Copyright © 2015 Elsevier B.V. All rights reserved.
Comments
The complete cDNA template sequence was obtained from the information provided in the publication as described in Singh et al. 2016. The probe was synthesized from cDNA clone ChEST650k15.
Stage
Image (click image to view full size)
Location (click to highlight)
Comments (click to highlight)
25-30
stage 28
Limb Buds
31-38
stage 31
stage 34
stage 36
stage 38
Limb Buds
all
Mouse
Emage
MGI:88338
MGI GXD
MGI:88338
Frog
Xenbase
487546
Fruit Fly
BDGP
Zebra Finch
ZEBrA
Zebrafish
ZFIN
ZDB-GENE-110429-1
,
ZDB-GENE-110429-2
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