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CHRDL1 chordin like 1 Gene Summary Expression Other Species Expression JBrowse Gene Official Symbol CHRDL1 Official Full Name chordin like 1 CGNC ID 6111 also known as NRLN1, chordin-like protein 1|likely ortholog of mouse neuralin 1|neuralin-1|neurogenesin-1|ventroptin gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Gene Ontology Links to other databases
Entry 1 GEISHA Id CHRDL1.UApcr Data Source GEISHA ISH Analysis Forward cDNA Template Primer 5'-TGGCAAAACATACTCCCACGG-3' Reverse cDNA Template Primer 5'-AATTAACCCTCACTAAAGGCAGTCTCTCTTTCTACTTCCCCCAG-3' cDNA Template Length 820 Complete cDNA Template Probe show TGGCAAAACATACTCCCACGGTGAATCTTGGCATCCTAATCTCCGGGCCTTTGGAATTGTAGAGTGTGTGCTGTGTACC TGCAACATCACCAAACAAGAGTGTAAGAAAATTCATTGTCCAGAACAGTATCCCTGCAAATACCCTCAGAAAGTGGAAG GAAAATGCTGTAAAGTCTGTCCAGAAGAAGTGCCAAGTCAAAGCTTTGACAACAAAGATTACTTCTGTGGGAAAGAGAC CTTTCCCGTCTATGAATCCATTTTCACAGAGGAAGGAGAAACCATCAGAAAAATTGCAGTAGAGACTGAAAAACCACCA CAAATAGAAATACATGTGTGGACAATCAGAAAAGGGATTCTCCGTCATTTCTACATTGAGAAAATGTCCAAGAGGGAAT TTGAAGAGCTTCCCTACTTCAAACAGATAACAAGGACAACCTCTAGCCAGTGGAAAATATTTAGCGAGGGAGAAGCTCA GATCAGCCAAATGTGTGAAAGCAGAGTGTGCAGGACTGAACTCGAGGATTTGGTAAAGGTTTTGTACCTTGAGAAGTCT GAAAAGGGTCACTGTTAAGGGAGACAGCACTGGAGGGAGAAACACAAGAAAACTTATGAAAACTTGGATCTGCAGCTGG ACTGCAGGCTTATTTTGCTTAAGTCAACAGTTGCCCTAAAAACCAAAACTATAATGCAGTAATTATTCACATCATGCAC AGCAAATTTGCTGCTTTATGTGTAGTGGTCTGTGTCAATCGTTCAAATATCTCCTCCAAAAGACTAGGAGGCTCTGTGT TACTGCTGGGGGAAGTAGAAAGAGAGACTG
Entry 2 GEISHA Id Ventroptin.Chimal-Monroy.2003 Data Source Publication Complete cDNA Template Probe show GATGAGAAGAAAGTGGAGATCGGAGGATTTTCATTTTGTCTTTTTTGGTGTGCTCTGTCTCCTGCTCATAGACAGAGGT AAACTAGAACAAGTAAAACATTCAGATACATACTGTGTGTTTCAAGACAAGAAGTACCGTGTAGGAGAAAGATGGCACC CTTACCTAGAACCCTACGGGCTTGTTTACTGTGTTAATTGTCTCTGCTCAGAGAATGGAAATGTCCTGTGCAGCAGAAT AAGATGTCCAAGCCTACACTGTCCTTCCCCTGTGCATGTACCACAGCTGTGCTGCCCGCGATGCCCAGAAGATTCGCTG TTCTCAGTAAGCAGCAAAATCACTGGGAAATCCTGTGAATACAATGGCACCACCTACCACCACGGCGAAATGTTTGTGG CAGAGGGGCTTTTCCAAAACAGGCAAGCAAACCAGTGTGCCCAGTGCAGCTGCTCAGAAGGAAATGTGTACTGTGGGCT GAAGACCTGTCCCAAATTAACTTGCTCTTTCCCAGTTTCTGTTCCAGAGTCCTGCTGCCCAGTTTGCAGAGGAGATGGA GAGTTATCCTGGGAACAGGCTGATGGAGATATCTTCCGGCAGCCAGCCAACAGGGAAGCCAGACACTCTTACCACCGCC CCCACTATGAGCTGTCACCCAGCTCCACCAGGCAGGTAGTCAATGTTCCACGATTTCCAAGTGCCAGGAGTAACCGCGG AGTTCTACCAGATCCCCAGCAAGCCTCAGGAACAATAGTACAAATTGTTATCAACAACAAGCACAAGCATGGACGAGTT TGTGTTTCAAATGGCAAAACATACTCCCACGGTGAATCT
Citation Chimal-Monroy J, Rodriguez-Leon J, Montero JA, Gañan Y, Macias D, Merino R, Hurle JM. Analysis of the molecular cascade responsible for mesodermal limb chondrogenesis: Sox genes and BMP signaling. Dev Biol. 2003 May 15;257(2):292-301. Copyright Reprinted with permission from Elsevier.
Copyright © 2003 Elsevier B.V. All rights reserved.
Comments The probe for Ventroptin was amplified by PCR using the following primers: 5'-GGAATTCCGATGAGAAGAAAGTGGAGATCG-
3', and 3 primer, 5'-GCTCTAGAGCAGATTCACCGTGGGAGTAT-
3'.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-26 stage 26
Leg Bones
Entry 3 GEISHA Id CHRDL1.Ratie.2013 Data Source Publication Complete cDNA Template Probe show CGGGGCCGCGCGGCAGGACCGGCCGCCGAGCATCCTCGGGCCTCCGGTGGCGGCAGGTGTCCCGGGGCGGCCCGGGGCC TCGCGGAGCGCCCGCCCCGCAGGGGTCCGGGGGGGAACAGCGGAGCGCCGCCTCTTCGCCCCGCGCTCTACGGGGCCGC GGGCCGCCGGCGGCCGTCGGTCCCCAGCTCGTCCCCGCCGCCGCCGCGGGAGCGAAGGGAAGAGCCGAGAGCCCGGCCG AGCGGCGGCAGAAGATTATGGCGACGTGAGCGGCAGCGCAGCCCCCGACCCGAGACCCCCGCGCCCCGGCGCAGCGCAG AGGCTCCCCCGGCACCGCCGCGGTTCGGAGCGGCCTCCGGCCCCTCAGCTCAAACGTTCTCTACCTTGGAGGTTCCTTC TCTCCCTTTTGTTGATAAAGATGAGAAGAAAGTGGAGATCGGAGGATTTTCATTTTGTCTTTTTTGGTGTGCTCTGTCT CCTGCTCATAGACAGAGGTAAACTAGAACAAGTAAAACATTCAGATACATACTGTGTGTTTCAAGACAAGAAGTACCGT GTAGGAGAAAGATGGCACCCTTACCTAGAACCCTACGGGCTTGTTTACTGTGTTAATTGTCTCTGCTCAGAGAATGGAA ATGTCCTGTGCAGCAGAATAAGATGTCCAAGCCTACACTGTCCTTCCCCTGTGCATGTACCACAGCTGTGCTGCCCGCG ATGCCCAGAAGATTCGCTGTTCTCAGTAAGCAGCAAAATCACTGGGAAATCCTGTGAATACAATGGCACCACCTACCAC CACGGCGAAATGTTTGTGGCAGAGGGGCTTTTCCAAAACAGGCAAGCAAACCAGTGTGCCCAGTGCAGCTGCTCAGAAG GAAATGTGTACTGTGGGCTGAAGACCTGTCCCAAATTAACTTGCTCTTTCCCAGTTTCTGTTCCAGAGTCCTGCTGCCC AGTTTGCAGAGGAGATGGAGAGTTATCCTGGGAACAGGCTGATGGAGATATCTTCCGGCAGCCAGCCAACAGGGAAGCC AGACACTCTTACCACCGCCCCCACTATGAGCTGTCACCCAGCTCCACCAGGCAGGTAGTCAATGTTCCACGATTTCCAA GTGCCAGGAGTAACCGCGGAGTTCTACCAGATCCCCAGCAAGCCTCAGGAACAATAGTACAAATTGTTATCAACAACAA GCACAAGCATGGACGAGTTTGTGTTTCAAATGGCAAAACATACTCCCACGGTGAATCTTGGCATCCTAATCTCCGGGCC TTTGGAATTGTAGAGTGTGTGCTGTGTACCTGCAACATCACCAAACAAGAGTGTAAGAAAATTCATTGTCCAGAACAGT ATCCCTGCAAATACCCTCAGAAAGTGGAAGGAAAATGCTGTAAAGTCTGTCCAGAAGAAGTGCCAAGTCAAAGCTTTGA CAACAAAGATTACTTCTGTGGGAAAGAGACCTTTCCCGTCTATGAATCCATTTTCACAGAGGAAGGAGAAACCATCAGA AAAATTGCAGTAGAGACTGAAAAACCACCACAAATAGAAATACATGTGTGGACAATCAGAAAAGGGATTCTCCGTCATT TCTACATTGAGAAAATGTCCAAGAGGGAATTTGAAGAGCTTCCCTACTTCAAACAGATAACAAGGACAACCTCTAGCCA GTGGAAAATATTTAGCGAGGGAGAAGCTCAGATCAGCCAAATGTGTGAAAGCAGAGTGTGCAGGACTGAACTCGAGGAT TTGGTAAAGGTTTTGTACCTTGAGAAGTCTGAAAAGGGTCACTGTTAAGGGAGACAGCACTGGAGGGAGAAACACAAGA AAACTTATGAAAACTTGGATCTGCAGCTGGACTGCAGGCTTATTTTGCTTAAGTCAACAGTTGCCCTAAAAACCAAAAC TATAATGCAGTAATTATTCACATCATGCACAGCAAATTTGCTGCTTTATGTGTAGTGGTCTGTGTCAATCGTTCAAATA TCTCCTCCAAAAGACTAGGAGGCTCTGTGTTACTGCTGGGGGAAGTAGAAAGAGAGACTGTACTTTCCCAGAGTTGCAT TTCTTTACAAGTTAAAAAGAGAAAACAGAACGCTTTTATTATTTGGCAAGTTATTCAAACTAATGAAAAGAAGGACACC TAATAAATGTGCAGGAGCTATGGAGAGCATTATTTCCTGTGCCGAGCTCATACCATTTCTGGAGTTGAAATGGCTTGTG GATTTCTTTTTAAGTAGTGGAAGAAAAATACAAGTGCTACAATACTTGTGTTGGAGACATAAAAAACAGATTTAAACTA ACAAACTCTAAGCAGCCTGCCTTTGGGATGATGTCTTGTAGTTGAGCAAACAGAGTCCATAAACTGAACAGCAGGTGTT AGTGGCAATCACTATATTTTTGTAGCAACTTGAGCAAATGTTCCCTTTTAAGTGGTTTTCACTGTTTCCACCACCGGTT TCTCTAAAAAAATGCACGTACTATCTCTCAATCACACCCCTAATAACTTCATTCTTCTGGGCCCGATTAACACGTGGTC TTGGCTGATAGACTGCCTTCTAAATCGATGCTGAAGAAGGTGGTGAAGTACTTGCAGCACTTTCAGAACTCCTAGGGGG TTGCACCTCCCAGTTAATAACTCCTTCATTGGAGCAGAGCTTAATTTATTTGTTCTGGTTTGTTACAAAGTTAATCTGC ATTTTTTTCTGATGGTGACTTCCCAATTCTCAAGCTTCAAGGACAGATTTCTCCCACCACAAATACCAAACAGCTACAG CAAGTCTTTAGAACACAGTAGCCCTATGAAAACTCTTATCTTTGTGAAAAATAATTTTGAGATACTCCATTAAATTTAG TATAGCACGTCTACAGTGTTTAAGGAAGGTGGGTCTCATCTGCCAAAAAAGAAGCAGAAGGTTGTTATTTTGAAAAAAT ATTTTCTCTGAAGAGTCACCATAATGCTGCACTGCCCGGGGACTGCAGTGTTGGGTGAATTCCCAAGAAGCAAATGACT CTGCCTGCTTTGCCTCCATTTTCTGCTCCACAAGTGGGAAGGAAAACTGCTGTTCAAACACATACTAGGAAACAAAGCT TTATGGAAATGGTCTGAACCAGTGGCTGGGCCTTCACAGGGAGTGAAGTAACAGTGACTGCGAGGATTTTGAGGTTTGT TGTTCTGCCAGCAACAGCACTGCAGGAGTGTACCCATTTCTAAAGGGACAGAGATGTGGGAGAGCTCAGCACTGAATGC CAAAAGCAGGTTTCAGGCAAAGCTTCACCACCCCGAGCAGACTGGGGCAGCCTCCCCGCAGCTCCTCTCAGCCAGGCTG CCTCATGCTGCCCAGGCCCTGCTCTGCTAAAGGCAGCACGGTGTGGGGCTTCCCAGCAAAGAGGAGCAAGTGAGAAAAA CAGGCTGAAAGGGGTTGGAAAGCTAGAGGGAGCTGGGAAAATAACTCACTGAGTGACCCAGGATGTTGTAACTCTAGGA TCCTGCATATAATCATCACATTGTCCCTAGGCCTGGATGCTGGTAGTTAACATAGAGGAACACTTCCCTCCCTGCCAAG TACTCAACACAGTCCACCATGTCAGCAAAATATGCTAAAAAGGGAGCATGCAGGTGGATTTGCAATAATAAAACTCTAG TCTGATGTCAGTAAGAACCAAACCTCATCAGGTTGCAGTGAGGACAGCTACTCCAGCATGGGTCCTGCACAGCCACAGT CCTGCCAGCAGAACTGCCCAGCAAGGCCACAGGGAGCCCAGGCCTGGGGCCCTTCCTGCCCTGACCTGCTGCAGGGCCA CTCCTCACACTTCTCCCCTCACTGCTGGCCCTGTTTCACCCTTTCTGAAATCCTCTTTCCCCGAGGTGTCGCTGCTGGG CCCAGCCGTGCCTTTTCAGCCACATGACAGCCCAGGGCAGCCCCAGCCTCTCCTCACAGAGCCCCATCGGGCACAGACA CCACCACCACTGGTAATGTGCTATGTGCACAGAGTCTGAATGGGCACCTGGCCATACAAAAGACAAAGTGATTTGTCCC ATTGAGTTGTCATGGTATCATTGCCTACATAAGTGCCGTGCAGGTGTTTGGAAGTGGAGTAGGGCATCCTAACCAAGGT CCTGAGGCCTCACTGCACCAGAAGTCACTGCAATATAATTAACTGCAGAAGCACCAGCTTGGTCTTAGCAAAACCCACA GCATGTGGCATCTATTGAGTTCAAACGTGCTGTAGAAGTGCTAAATCTCACCAGAACTCTTCTGATAAGCCGTGAATTA TCCTGACCCTTCCTTTGGTGAAGACGCCGTAAGGAAGACTGAGGAACTGCAGCGATCTGGTGGGAAGAGCAGCAGTTGC CTTCTCACCTCATGGGCATAGTCTGTAGCAGTAGCTGGTGAACAAAGACTGAGGGGAAAGTGTACAGTGCTTGTGTTTT TATGAAGGTGGCAATCAGCTTTTTGTATTTGTGACAGGACAGGTGGAGTCCAGATTGTGTATTTATTTTATAATAAACA CTTTCTAAGAAAAGCAAAAAAAATCATAAGCACCATTTAGTAAAATGCAGTGTTGCATTTTTTACAGTTTGTTGTCACT TAGGCAAATAAAATACACAGTGTCATCATGCTTTCAATTCTTTTCATGGGATGTATGTCTGTTACAGTACTTATTTATG TACTTGTATCACTTCAACCTGGTTTTATAAGTTAATAAACTCTAAAGTTGTTAATAAAG
Citation Leslie Ratié, Michelle Ware, Frédérique Barloy-Hubler, Hélène Romé, Isabelle Gicquel, Christèle Dubourg, Véronique David and Valérie Dupé. Novel genes upregulated when NOTCH signalling is disrupted during hypothalamic development. Neural Dev. 2013 Dec 23;8:25. doi: 10.1186/1749-8104-8-25. Copyright © 2013 Ratié et al.; licensee BioMed Central Ltd. Comments The sequence below was obtained from NCBI (acc # NM_204171.1) using the information provided in the publication as described in Ratie et al.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-15 stage 15
stage 15
stage 15
stage 15
Hypothalamus
Mouse Frog Fruit Fly Zebra Finch Zebrafish