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COL9A3
collagen type IX alpha 3 chain
The human orthologue of this gene is associated
with the following human diseases:
Epiphyseal dysplasia, multiple, 3
{Intervertebral disc disease, susceptibility to}
Gene Summary
Expression
Other Species Expression
JBrowse
Gene
Official Symbol
COL9A3
Official Full Name
collagen type IX alpha 3 chain
CGNC ID
4190
also known as
collagen alpha-3(IX) chain|collagen, type IX, alpha 3|collagen-alpha-3 type IX
gene type
protein-coding
Genomic Map
Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNA
NM_205305
Polypeptide
NP_990636
Gene Expression
In Situ Hybridization
GEISHA
Orthology
Entrez Gene
Ensembl Gene
Genetic Phenotypes
MOD
Fruit Fly
Human
1299
ENSG00000092758
MIM:600969
MIM:120270
Mouse
12841
ENSMUSG00000027570
All phenotypic alleles (
1
):Targeted, knock-out(
1
)
MGI:894686
Xenopus
100145619
,
446508
997412
Zebrafish
567110
ENSDARG00000037845
ZDB-GENE-030131-9799
ZFIN:ZDB-GENE-030131-9799
Gene Ontology
Molecular Function
Biological Process
Cellular Component
collagen
Links to other databases
Entrez Gene
396242
Ensembl Gene
ENSGALG00000005628
KEGG
gga:396242
GEISHA Id
COL9A3.Smith.2018
Data Source
Publication
Complete cDNA Template Probe
show
AACTGGGTCCAAAAGGTGCTCAAGGACCCAATGGGACAGCTGGAGCTCCAGGGATCCCAGGACACCCAGGGCCCATGGG
CCATCAGGGGGAGCAGGGCGTTCCTGGCATCACAGGCAAACCGGGGCCTCCTGGCAAAGAGGCCAGCGAGCAACATATA
AGAGAACTCTGTGGGGAAATGATAAACGATCAAATTGCACAGTTAGCTGCTAATCTAAGAAAGCCCTTATCTCCTGGGA
TGACGGGGCGCCCTGGTCCTGCTGGTCCACCGGGTCCTCCAGGAGCGACGGGAAGCGTTGGACATCCTGGTGCTCGTGG
TCCACCCGGATACAGAGGGCCAACAGGAGAGCTTGGTGATCCTGGTCCCAGAGGTGACACAGGCGAAAAGGGAGATAAA
GGACCGGCTGGACAAGGAATTGATGGGCCTGATGGTGATCAAGGACCTCAAGGACTTCCTGGTGTACCTGGAATTAGTA
AAAATGGTCGGGATGGTGCTCAGGGTGAACCCGGTCTTCCAGGGGATCCCGGTACTCCTGGTGCTGTTGGGGCTCAGGG
AACTCCAGGCATATGTGACACATCAGCTTGCATGGG
Citation
Jonathan N Smith, Heather M Walker, Hannah Thompson, J Martin Collinson, Neil Vargesson, Lynda Erskine. Lens-regulated retinoic acid signalling controls expansion of the developing eye. Development. 2018 Oct 10;145(19):dev167171. DOI: 10.1242/dev.167171.
Copyright
Copyright © 2018. Published by The Company of Biologists Ltd.
Comments
The complete cDNA template sequence was obtained from the information from the publication as described in Smith et al. 2018.
Stage
Image (click image to view full size)
Location (click to highlight)
Comments (click to highlight)
19-23
stage 23
Retina
all
Mouse
Emage
MGI GXD
MGI:894686
Frog
Xenbase
997412
Fruit Fly
BDGP
Zebra Finch
ZEBrA
Zebrafish
ZFIN
ZDB-GENE-030131-9799
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