GEISHA - A Chicken Embryo Gene Expression Database
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PRDM4
PR/SET domain 4

Gene
Official SymbolPRDM4
Official Full NamePR/SET domain 4
CGNC ID9577
also known asPR domain zinc finger protein 4|PR domain 4|PR domain containing 4, PR domain zinc finger protein 4
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNAXM_416301
PolypeptideXP_416301
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human11108ENSG00000110851MIM:605780
Mouse72843ENSMUSG00000035529All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(2) MGI:1920093
Xenopus779710, 379872958480
Zebrafish100000537ENSDARG00000017366ZDB-GENE-041210-131ZFIN:ZDB-GENE-041210-131
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene418065
Ensembl GeneENSGALG00000012619
KEGGgga:418065

Entry 1

GEISHA IdChEST809d14Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
TGTGGATGTGTCCGCAGACAATCTTGCCTTCGTACCGTCCTCTCTGCAAATGGAAGACTCCAATTCGAACAAGGAGAAC
ATGGCAACCTTGTTTACCATATGGTGCACGCTGTGTGACAAGGCATATCCATCAGACTGCCCTGACCACGGACCTGTCA
CCTTTGTCCCGGACACCCCAATAGAGAGCCGAGCCAGGCTTTCTCTCCCTAAGCAGCTTGTCCTACGGCAGTCTCTCAT
GGGAGCTGAAGTGGGTGTGTGGACACGAGAAACCATTCCTGTAAGGACTTGTTTTGGGCCTCTGATTGGGCAGCAGAGC
CATTCTCTGGAGGTGGCTGACTGGACAGACAAAGCAGCTAGTCACATCTGGAAGATCTATCACAGTGGTGTCCTGGAGT
TCTGCATCATTACAACTGATGAAACTGAATGTAATTGGATGATGTTTGTACGCAAAGCCAGGAACCGGGAAGAACAGAA
TCTGGTGGCTTATCCTCACGATGGAAAAATTTACTTTTGCACCTCTCGGGACATCCCACCTGAGCACGAGCTTTTCTTT
TATTACAGTCGGGACTACGCACGACAGCTTGGTGTCCCCGAACATCCAGATGTGCACATCTGCCACTGTGGAAAGGAAT
GTGCTTCCATCACTTTGTCCTCAGTGGTTTGAGTCTGCTTTCATCAGAGCGTTCCAGACTGACAATTAAAGAAAAGATT
TCTC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
Heart Tube
weak
13-18
stage 16
Cardiovascular
 
19-21
stage 21
Allantois
Cardiovascular
 

Entry 2

GEISHA IdPRDM4.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5’-CGCAGACAATCTTGCCTTC-3’
Reverse cDNA Template Primer5’-AATTAACCCTCACTAAAGGAATCGCACTTGTGTGGC-3’cDNA Template Length827
Complete cDNA Template Probeshow
CGCAGACAATCTTGCCTTCGTACCGTCCTCTCTGCAAATGGAAGACTCCAATTCGAACAAGGAGAACATGGCAACCTTG
TTTACCATATGGTGCACGCTGTGTGACAAGGCATATCCATCAGACTGCCCTGACCATGGACCTGTCACCTTTGTCCCGG
ACACCCCAATAGAGAGCCGAGCCAGGCTTTCTCTCCCTAAGCAGCTTGTCCTACGGCAGTCTCTCATGGGAGCTGAAGT
GGGTGTGTGGACACGAGAAACCATTCCTGTAAGGACTTGTTTTGGGCCTCTGATTGGGCAGCAGAGCCATTCTCTGGAG
GTGGCTGACTGGACAGACAAAGCAGCTAGTCACATCTGGAAGATCTATCACAGTGGTGTCCTGGAGTTCTGCATCATTA
CAACTGATGAAACTGAATGTAATTGGATGATGTTTGTACGCAAAGCCAGGAACCGGGAAGAACAGAATCTGGTGGCTTA
TCCTCACGATGGAAAAATTTACTTTTGCACTTCTCGGGACATCCCACCTGAGCACGAGCTTTTCTTTTATTACAGTCGG
GACTACGCACGACAGCTTGGTGTCCCCGAACATCCAGACGTGCACATCTGCCACTGTGGAAAGGAATGTGCTTCCTATG
CGGACTTCAAGGCCCATTTGAGCAGCCATATTCACAGCCACCTCCCCAGCCAGGGCCACAGCAGCAGCCACGGGCCAGG
CCATGGCAAGGAAAGGAAATGGAAGTGCTCCATGTGCCCCCAGGCTTTCATCTCCCCTTCCAAGCTCCACGTCCACTTC
ATGGGGCACATGGGCATGAAGCCACACAAGTGCGATT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 11
Unlabeled
 
13-18
stage 18
Head Mesenchyme
Pharyngeal Arches and Clefts
 
19-24
stage 20
stage 24
Allantois
Head Mesenchyme
Pharyngeal Arches and Clefts
Spinal Ganglia and Nerves
 
25-26
stage 25
stage 26
Head Mesenchyme
Leg Mesenchyme
Notochord
Pharyngeal Arches and Clefts
Spinal Ganglia and Nerves
Wing Mesenchyme
 

Mouse

EmageMGI:1920093
MGI GXDMGI:1920093

Frog

Xenbase958480

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-041210-131
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