GEISHA - A Chicken Embryo Gene Expression Database
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LSP1
lymphocyte specific protein 1

Gene
Official SymbolLSP1
Official Full Namelymphocyte specific protein 1
CGNC ID4964
also known asLSP1P1, lymphocyte-specific protein 1|lymphocyte-specific protein 1 pseudogene 1, lymphocyte-specific protein 1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_204342
PolypeptideNP_989673
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human4046ENSG00000130592MIM:153432
Mouse16985ENSMUSG00000018819All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(2) MGI:96832
Xenopus496868, 100158343490854
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene374254
Ensembl GeneENSGALG00000006583
KEGGgga:374254

Entry 1

GEISHA IdF14Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GGGAGAAACGAAGAAGAAGAGACCCCTGAAAAACGCCCAAAGGCCCCAAGCCCCACCAGCCTGGATGAGGAGGAGCTGT
GCTCAGACCACACTGCGGTGTGCTCCACCAAGATCACAGACAGAACTGAGTCTCTGAACCGTTCAATAAAGAAAAGTAA
CAGCATAAAGAAGTCCCAGCCTCCTCTGCCTGTGTCCAAGATAGATGACAGACTGGAGCAATACACACAAGCCATTGAG
ACATCCACAAAGGCTCCAAAGCCTGTCCGGCAGCCCTCTCTTGACCTTCCCACCACCAGCATGATGGTAGCCAGCACAA
AAAGCCTATGGGAGACTGGAGAGGTTGCTGCCCAATCTGCAGTGAAGACCCCAGCCTGCAAGGATATTGTGGCTGGAGA
CATCGTGAGTAAAAGAAGCCTTTGGGAACAGAAGGGTAGTCCCAAACCTGAGAGCAATATCAAGTCCACTCCTTCTGGC
AAGAAGTACAAGTTTGTTGCGACGGGCCATGGCCAGTACAAGAGGGTATTGATAGATGATGCTGCAGA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-8
stage 8
Neural Plate/Tube
 

Entry 2

GEISHA IdLSP1.Bell.2004Data SourcePublication
Forward cDNA Template Probeshow
GGGAGAAACGAAGAAGAAGAGACCCCTGAAAAACGCCCAAAGGCCCCAAGCCCCACCAGCCTGGATGAGGAGGAGCTGT
GCTCAGACCACACTGCGGTGTGCTCCACCAAGATCACAGACAGAACTGAGTCTCTGAACCGTTCAATAAAGAAAAGTAA
CAGCATAAAGAAGTCCCAGCCTCCTCTGCCTGTGTCCAAGATAGATGACAGACTGGAGCAATACACACAAGCCATTGAG
ACATCCACAAAGGCTCCAAAGCCTGTCCGGCAGCCCTCTCTTGACCTTCCCACCACCAGCATGATGGTAGCCAGCACAA
AAAGCCTATGGGAGACTGGAGAGGTTGCTGCCCAATCTGCAGTGAAGACCCCAGCCTGCAAGGATATTGTGGCTGGAGA
CATCGTGAGTAAAAGAAGCCTTTGGGAACAGAAGGGTAGTCCCAAACCTGAGAGCAATATCAAGTCCACTCCTTCTGGC
AAGAAGTACAAGTTTGTTGCGACGGGCCATGGCCAGTACAAGAGGGTATTGATAGATGATGCTGCAGA
CitationBell GW, Yatskievych TA, Antin PB. GEISHA, a whole-mount in situ hybridization gene expression screen in chicken embryos. Dev Dyn. 2004 Mar;229(3):677-87.
CopyrightCopyright © 2004 Wiley-Liss, Inc.
CommentsThe probe sequence below was obtained from the GEISHA database using information provided in the publication, Geisha F14.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-8
stage 8
stage 8
Neural Plate/Tube
 

Entry 3

GEISHA IdLSP1.Anderson.2022Data SourceDirect Submission
Complete cDNA Template Probeshow
CTTTTTCTTTTAATTAAATCTGGCTCTGCCATGGAGATGGGAGGCTGTGGCTCCCCTCCCTTTCTTCTTTTTCAAATGC
TGAAAGAGAAGGGCCTGCTGTCCTGACCAGCTGGCAGGGCTTCTGCTGTGTGATGGAGAGCTTCTGGCTCTGGGTGGCT
GGAGTGGGGGGAGCTCATGAGAACCCCAGTGGAGGAATTGGTGTTGGAAAGGAGAGTGATGGGCAGACTCTGTGCCACC
CTCCTTGTGCCAGCTGTATGTGAAGATGTTGCACTGCAGAATCTGTTTCGAGGGACCTCCATCTCCATGTGCACATCAA
ACAGTTTAATTTAGTCCTGTTTATTTACTTCCCATATCATCCTTTAATCACAACTAAGTAGCCATGCCATAATGCTCCT
GCCACTTTTCCTTGTTGACAGTGGCAGCAGCTTTGCTTCAAAGAGCTGCTGCCTTTCCCTCTGCTGCCCATGGTGGGGG
TGAGCACTCCTTCTCCAGGTAAGGAGATCCTCTTGAAGTGCTTTTTTTTCCTACCCCCTTCTCACAAAGGCTCTCAACA
TAATTTTGCTTCTGCTTCAATTTACAATGTGTTCTGGATTCAATTTTTTTGTAAGCATTTAATAAAATTTGAGGAAGAT
GTTGTAACCAAAAA
CommentsImages and probe sequence provided by Claire Anderson. Related paper: Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
stage 12
stage 12
stage 12
Extraembryonic
Intermediate Mesoderm
Lateral Plate Mesoderm
Notochord
Proepicardium
Sclerotome
Somatic Mesoderm
Somites
Splanchnic Mesoderm
Yolk Sack or Stalk
extraembryonic endoderm
 

Entry 4

GEISHA IdLSP1.Anderson.2019Data SourcePublication
Complete cDNA Template Probeshow
GGCTCTGCCATGGAGATGGGAGGCTGTGGCTCCCCTCCCTTTCTTCTTTTTCAAATGCTGAAAGAGAAGGGCCTGCTGT
CCTGACCAGCTGGCAGGGCTTCTGCTGTGTGATGGAGAGCTTCTGGCTCTGGGTGGCTGGAGTGGGGGGAGCTCATGAG
AACCCCAGTGGAGGAATTGGTGTTGGAAAGGAGAGTGATGGGCAGACTCTGTGCCACCCTCCTTGTGCCAGCTGTATGT
GAAGATGTTGCACTGCAGAATCTGTTTCGAGGGACCTCCATCTCCATGTGCACATCAAACAGTTTAATTTAGTCCTGTT
TATTTACTTCCCATATCATCCTTTAATCACAACTAAGTAGCCATGCCATAATGCTCCTGCCACTTTTCCTTGTTGACAG
TGGCAGCAGCTTTGCTTCAAAGAGCTGCTGCCTTTCCCTCTGCTGCCCATGGTGGGGGTGAGCACTCCTTCTCCAGGTA
AGGAGATCCTCTTGAAGTGCTTTTTTTTCCTACCCCCTTCTCACAAAGGCTCTCAACATAATTTTGCTTCTGCTTCAAT
TTACAATGTGTTCTGGATTCAATTTTTTTGTAAGCATTTAATAAAATTTGAGG
CitationAnderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
CopyrightCopyright © 2019 Elsevier Inc. All rights reserved.
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Anderson et al. 2019.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
Proepicardium
 

Mouse

EmageMGI:96832
MGI GXDMGI:96832

Frog

Xenbase490854

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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