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Human Disease Gene Search
HOXA13 homeobox A13 The human orthologue of this gene is associated with the following human diseases:
Gene Summary Expression Other Species Expression JBrowse Gene Official Symbol HOXA13 Official Full Name homeobox A13 CGNC ID 16060 also known as Hox A13, homeobox protein Hox-A13|HOX protein|homeo box A13|homeobox protein HOXA13|transcription factor HOXA13, Homeobox protein Hox-A13 gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Gene Ontology Links to other databases
Entry 1 GEISHA Id HOXA13.UApcr Data Source GEISHA ISH Analysis Forward cDNA Template Primer GAGCCCGCTGTCAAGCAGTG Reverse cDNA Template Primer AATTAACCCTCACTAAAGCCGCCGTTTGTCTTTGGTTATG cDNA Template Length 579 Forward cDNA Template Probe show GAGCCCGCTGTCAAGCAGTGCAGCCCCTGCTCCGCCGCCGTGCAGAGCTCCTCCGGCGCCGCGCTGCCCTACGGCTACT TCGGCAGCGGCTACTACCCGTGCCGCATGACCCACCACAACGCCATCAAGTCCTGCGCCCAGCCCGCCTCCACCTTCGC CGACAAGTACATGGACACGTCGGTCTCCGGCGAGGAGTTCACGTCGCGGGCCAAGGAGTTCGCCTTCTACCAGGGCTAC GCGGCCGGGCCCTACCAGCCGGTGCCCGGCTACCTGGACGTGCCCGTGGTGCCCACCATCGGCGGCCCCGGCGAGCCGC GCCACGACTCCCTGCTCCCCATGGACAGCTACCAGCCGTGGGCCATCACCAACGGGTGGAACGGGCAAGTGTACTGCCC CAAGGAGCAGAGCCAGCCGCCTCACCTCTGGAAGTCCACCCTCCCGGACGTCGTCTCGCATCCCTCGGATGCGAACTCG TACAGACGTGGGAGGAAGAAGCGAGTGCCCTACACAAAGGTGCAGTTAAAAGAACTCGAAAGGGAATACGCTACAAATA AATTCAT
Comments No expression detected at or before stage 4.
Entry 2 GEISHA Id HoxA13.Matsushita.2002 Data Source Publication Complete cDNA Template Probe show ATGTTCCTCTACGACAACAGCCTGGATGAGATCAATAAGAACATGGACGGGTTTCACGCCGGCAGCAACTTCGCGGCGG CTGCGGCGGCCAACCCGTGCCGCAACCTGATGGCTCACCCCGCGCCCCTGGCCGCCCCCAGCGCCGCCGCCTACACGTC GAGCGAGGCCCCCGCCGCCGGCATGGCCGAGCCCGCTGTCAAGCAGTGCAGCCCCTGCTCCGCCGCCGTGCAGAGCTCC TCCGGCGCCGCGCTGCCCTACGGCTACTTCGGCAGCGGCTACTACCCGTGCCGCATGACCCACCACAACGCCATCAAGT CCTGCGCCCAGCCCGCCTCCACCTTCGCCGACAAGTACATGGACACGTCGGTCTCCGGCGAGGAGTTCACGTCGCGGGC CAAGGAGTTCGCCTTCTACCAGGGCTACGCGGCCGGGCCCTACCAGCCGGTGCCCGGCTACCTGGACGTGCCCGTGGTG CCCACCATCGGCGGCCCCGGCGAGCCGCGCCACGACTCCCTGCTCCCCATGGACAGCTACCAGCCGTGGGCCATCACCA ACGGGTGGAACGGGCAAGTGTACTGCCCCAAGGAGCAGAGCCAGCCGCCTCACCTCTGGAAGTCCACCCTCCCGGACGT CGTCTCGCATCCCTCGGATGCGAACTCGTACAGACGTGGGAGGAAGAAGCGAGTGCCCTACACAAAGGTGCAGTTAAAA GAACTCGAAAGGGAATACGCTACAAATAAATTCATAACCAAAGACAAACGGCGGAGGATATCGGCGACCACGAATCTGT CAGAGCGACAGGTCACAATCTGGTTCCAGAACAGAAGGGTCAAAGAGAAAAAAGTCATCAACAAATTGAAGACGACCAG TTAATGGATTAACCGCGGAGAAGCGGCAGCTCGGAAGGATCCGAAC
Citation Matsushita S, Ishii Y, Scotting PJ, Kuroiwa A, Yasugi S. Pre-gut endoderm of chick embryos is regionalized by 1.5 days of development. Dev Dyn. 2002 Jan;223(1):33-47. Copyright Copyright © 2002 Wiley-Liss., Inc. Comments Insufficient information provided to identify probe sequence.
Entry 3 GEISHA Id Hoxa13.Tiecke.2006 Data Source Publication Complete cDNA Template Probe show ATGTTCCTCTACGACAACAGCCTGGATGAGATCAATAAGAACATGGACGGGTTTCACGCCGGCAGCAACTTCGCGGCGG CTGCGGCGGCCAACCCGTGCCGCAACCTGATGGCTCACCCCGCGCCCCTGGCCGCCCCCAGCGCCGCCGCCTACACGTC GAGCGAGGCCCCCGCCGCCGGCATGGCCGAGCCCGCTGTCAAGCAGTGCAGCCCCTGCTCCGCCGCCGTGCAGAGCTCC TCCGGCGCCGCGCTGCCCTACGGCTACTTCGGCAGCGGCTACTACCCGTGCCGCATGACCCACCACAACGCCATCAAGT CCTGCGCCCAGCCCGCCTCCACCTTCGCCGACAAGTACATGGACACGTCGGTCTCCGGCGAGGAGTTCACGTCGCGGGC CAAGGAGTTCGCCTTCTACCAGGGCTACGCGGCCGGGCCCTACCAGCCGGTGCCCGGCTACCTGGACGTGCCCGTGGTG CCCACCATCGGCGGCCCCGGCGAGCCGCGCCACGACTCCCTGCTCCCCATGGACAGCTACCAGCCGTGGGCCATCACCA ACGGGTGGAACGGGCAAGTGTACTGCCCCAAGGAGCAGAGCCAGCCGCCTCACCTCTGGAAGTCCACCCTCCCGGACGT CGTCTCGCATCCCTCGGATGCGAACTCGTACAGACGTGGGAGGAAGAAGCGAGTGCCCTACACAAAGGTGCAGTTAAAA GAACTCGAAAGGGAATACGCTACAAATAAATTCATAACCAAAGACAAACGGCGGAGGATATCGGCGACCACGAATCTGT CAGAGCGACAGGTCACAATCTGGTTCCAGAACAGAAGGGTCAAAGAGAAAAAAGTCATCAACAAATTGAAGACGACCAG TTAATGGATTAACCGCGGAGAAGCGGCAGCTCGGAAGGATCCGAACTTTTTT
Citation Tiecke E, Bangs F, Blaschke R, Farrell ER, Rappold G, Tickle C. Expression of the short stature homeobox gene Shox is restricted by proximal and distal signals in chick limb buds and affects the length of skeletal elements. Dev Biol. 2006 Oct 15;298(2):585-96. Epub 2006 Jul 12. Copyright Reprinted from Developmental Biology, 298, Eva Tiecke, Fiona Bangs, Rudiger Blaschke, Elizabeth R. Farrell, Gudrun Rappold, and Cheryll Tickie, Expression of the short stature homebox gene Shox is restricted by proximal and distal signals in chick limb buds and affects the length of skeletal elements, 585-596, 2006, with permission from Elsevier.
Copyright © 2006 Elsevier B.V. All rights reserved. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204139).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 31-35 stage 35
Wing
Entry 4 GEISHA Id HOXA13.Theodosiou.2007 Data Source Publication Complete cDNA Template Probe show ATGTTCCTCTACGACAACAGCCTGGATGAGATCAATAAGAACATGGACGGGTTTCACGCCGGCAGCAACTTCGCGGCGG CTGCGGCGGCCAACCCGTGCCGCAACCTGATGGCTCACCCCGCGCCCCTGGCCGCCCCCAGCGCCGCCGCCTACACGTC GAGCGAGGCCCCCGCCGCCGGCATGGCCGAGCCCGCTGTCAAGCAGTGCAGCCCCTGCTCCGCCGCCGTGCAGAGCTCC TCCGGCGCCGCGCTGCCCTACGGCTACTTCGGCAGCGGCTACTACCCGTGCCGCATGACCCACCACAACGCCATCAAGT CCTGCGCCCAGCCCGCCTCCACCTTCGCCGACAAGTACATGGACACGTCGGTCTCCGGCGAGGAGTTCACGTCGCGGGC CAAGGAGTTCGCCTTCTACCAGGGCTACGCGGCCGGGCCCTACCAGCCGGTGCCCGGCTACCTGGACGTGCCCGTGGTG CCCACCATCGGCGGCCCCGGCGAGCCGCGCCACGACTCCCTGCTCCCCATGGACAGCTACCAGCCGTGGGCCATCACCA ACGGGTGGAACGGGCAAGTGTACTGCCCCAAGGAGCAGAGCCAGCCGCCTCACCTCTGGAAGTCCACCCTCCCGGACGT CGTCTCGCATCCCTCGGATGCGAACTCGTACAGACGTGGGAGGAAGAAGCGAGTGCCCTACACAAAGGTGCAGTTAAAA GAACTCGAAAGGGAATACGCTACAAATAAATTCATAACCAAAGACAAACGGCGGAGGATATCGGCGACCACGAATCTGT CAGAGCGACAGGTCACAATCTGGTTCCAGAACAGAAGGGTCAAAGAGAAAAAAGTCATCAACAAATTGAAGACGACCAG TTAATGGATTAACCGCGGAGAAGCGGCAGCTCGGAAGGATCCGAACTTTTTT
Citation Theodosiou NA, Hall DA, Jowdry AL. Comparison of acid mucin goblet cell distribution and Hox13 expression patterns in the developing vertebrate digestive tract. J Exp Zool B Mol Dev Evol. 2007 Jul 15;308(4):442-53. Copyright Copyright © 1999-2010 John Wiley & Sons, Inc. All Rights Reserved. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc #NM_204139.1)
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-26 stage 26
stage 26
stage 26
stage 26
Endoderm Hindgut Leg Mesoderm Tail
Entry 5 GEISHA Id HOXA13.Hughes.2011 Data Source Publication Complete cDNA Template Probe show ATGTTCCTCTACGACAACAGCCTGGATGAGATCAATAAGAACATGGACGGGTTTCACGCCGGCAGCAACTTCGCGGCGG CTGCGGCGGCCAACCCGTGCCGCAACCTGATGGCTCACCCCGCGCCCCTGGCCGCCCCCAGCGCCGCCGCCTACACGTC GAGCGAGGCCCCCGCCGCCGGCATGGCCGAGCCCGCTGTCAAGCAGTGCAGCCCCTGCTCCGCCGCCGTGCAGAGCTCC TCCGGCGCCGCGCTGCCCTACGGCTACTTCGGCAGCGGCTACTACCCGTGCCGCATGACCCACCACAACGCCATCAAGT CCTGCGCCCAGCCCGCCTCCACCTTCGCCGACAAGTACATGGACACGTCGGTCTCCGGCGAGGAGTTCACGTCGCGGGC CAAGGAGTTCGCCTTCTACCAGGGCTACGCGGCCGGGCCCTACCAGCCGGTGCCCGGCTACCTGGACGTGCCCGTGGTG CCCACCATCGGCGGCCCCGGCGAGCCGCGCCACGACTCCCTGCTCCCCATGGACAGCTACCAGCCGTGGGCCATCACCA ACGGGTGGAACGGGCAAGTGTACTGCCCCAAGGAGCAGAGCCAGCCGCCTCACCTCTGGAAGTCCACCCTCCCGGACGT CGTCTCGCATCCCTCGGATGCGAACTCGTACAGACGTGGGAGGAAGAAGCGAGTGCCCTACACAAAGGTGCAGTTAAAA GAACTCGAAAGGGAATACGCTACAAATAAATTCATAACCAAAGACAAACGGCGGAGGATATCGGCGACCACGAATCTGT CAGAGCGACAGGTCACAATCTGGTTCCAGAACAGAAGGGTCAAAGAGAAAAAAGTCATCAACAAATTGAAGACGACCAG TTAATGGATTAACCGCGGAGAAGCGGCAGCTCGGAAGGATCCGAACTTTTTT
Citation Hughes MW, Wu P, Jiang TX, Lin SJ, Dong CY, Li A, Hsieh FJ, Widelitz RB, Chuong CM. In search of the Golden Fleece: unraveling principles of morphogenesis by studying the integrative biology of skin appendages Integr Biol (Camb). 2011 Apr;3(4):388-407. Epub 2011 Mar 24.
Copyright © Royal Society of Chemistry 2011 Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204139.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-29 stage 26
stage 26
stage 29
Feathers/Scutae Limb Buds Tail
Entry 6 Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-23 stage 22
stage 22
stage 23
stage 23
stage 23
Limb Buds Wing AER
Entry 7 GEISHA Id Hoxa-13.Nelson.1996 Data Source Publication Complete cDNA Template Probe show GAGCTCCTCCGGCGCCGCGCTGCCCTACGGCTACTTCGGCAGCGGCTACTACCCGTGCCGCATGACCCACCACAACGCC ATCAAGTCCTGCGCCCAGCCCGCCTCCACCTTCGCCGACAAGTACATGGACACGTCGGTCTCCGGCGAGGAGTTCACGT CGCGGGCCAAGGAGTTCGCCTTCTACCAGGGCTACGCGGCCGGGCCCTACCAGCCGGTGCCCGGCTACCTGGACGTGCC CGTGGTGCCCACCATCGGCGGCCCCGGCGAGCCGCGCCACGACTCCCTGCTCCCCATGGACAGCTACCAGCCGTGGGCC ATCACCAACGGGTGGAACGGGCAAGTGTACTGCCCCAAGGAGCAGAGCCAGCCGCCTCACCTCTGGAAGTCCACCCTCC CGGACGTCGTCTCGCATCCCTCGGATGCGAACTCGTACAGACGTGGGAGGAAGAAGCGAGTGCCCTACACAAAGGTGCA GTTAAAAGAACTCGAAAGGGAATACGCTACAAATAAATTCATAACCAAAGACAAACGGCGGAGGATATCGGCGACCACG AATCTGTCAGAGCGACAGGTCACAATCTGGTTCCAGAACAGAAGGGTCAAAGAGAAAAAAGTCATCAACAAATTGAAGA CGACCAGTTAATGGATTAACCGCGGAGAAGCGGCAGCTCGGAAGGATCC
Citation Nelson CE, Morgan BA, Burke AC, Laufer E, DiMambro E, Murtaugh LC, Gonzales E, Tessarollo L, Parada LF, Tabin C. Analysis of Hox gene expression in the chick limb bud. Development. 1996 May;122(5):1449-66. Copyright Copyright © 1996 by Company of Biologists Comments The complete cDNA template sequence was obtained from the information from the publication as described in Nelson et al. 1996.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-24 stage 19
stage 19
stage 23
stage 23
stage 23
Leg Unlabeled Wing 25-30 stage 25
stage 25
stage 25
stage 25
stage 25
stage 27
stage 28
stage 28
Leg Wing 31-44 stage 44
stage 44
stage 44
Entry 8 GEISHA Id HOXA13.Yamamoto-Shiraishi.2020 Data Source Publication Complete cDNA Template Probe show ATGTTCCTCTACGACAACAGCCTGGATGAGATCAATAAGAACATGGACGGGTTTCACGCCGGCAGCAACTTCGCGGCGG CTGCGGCGGCCAACCCGTGCCGCAACCTGATGGCTCACCCCGCGCCCCTGGCCGCCCCCAGCGCCGCCGCCTACACGTC GAGCGAGGCCCCCGCCGCCGGCATGGCCGAGCCCGCTGTCAAGCAGTGCAGCCCCTGCTCCGCCGCCGTGCAGAGCTCC TCCGGCGCCGCGCTGCCCTACGGCTACTTCGGCAGCGGCTACTACCCGTGCCGCATGACCCACCACAACGCCATCAAGT CCTGCGCCCAGCCCGCCTCCACCTTCGCCGACAAGTACATGGACACGTCGGTCTCCGGCGAGGAGTTCACGTCGCGGGC CAAGGAGTTCGCCTTCTACCAGGGCTACGCGGCCGGGCCCTACCAGCCGGTGCCCGGCTACCTGGACGTGCCCGTGGTG CCCACCATCGGCGGCCCCGGCGAGCCGCGCCACGACTCCCTGCTCCCCATGGACAGCTACCAGCCGTGGGCCATCACCA ACGGGTGGAACGGGCAAGTGTACTGCCCCAAGGAGCAGAGCCAGCCGCCTCACCTCTGGAAGTCCACCCTCCCGGACGT CGTCTCGCATCCCTCGGATGCGAACTCGTACAGACGTGGGAGGAAGAAGCGAGTGCCCTACACAAAGGTGCAGTTAAAA GAACTCGAAAGGGAATACGCTACAAATAAATTCATAACCAAAGACAAACGGCGGAGGATATCGGCGACCACGAATCTGT CAGAGCGACAGGTCACAATCTGGTTCCAGAACAGAAGGGTCAAAGAGAAAAAAGTCATCAACAAATTGAAGACGACCAG TTAATGGATTAACCGCGGAGAAGCGGCAGCTCGGAAGGATCCGAACTTTTTT
Citation Yamamoto-Shiraishi Y, Kuroiwa A. Wnt and BMP signaling cooperate with Hox in the control of Six2 expression in limb tendon precursor. Dev Biol. 2013 May 15;377(2):363-74 Copyright © Elsevier Inc. All rights reserved Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_204139.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-26 stage 26
Leg all
Entry 9 Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-22 stage 20
stage 20
stage 22
stage 22
Leg Unlabeled Wing all
Mouse Frog Fruit Fly Zebra Finch Zebrafish