GEISHA - A Chicken Embryo Gene Expression Database
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HSPG2
heparan sulfate proteoglycan 2

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolHSPG2
Official Full Nameheparan sulfate proteoglycan 2
CGNC ID7709
also known asHSPG, basement membrane-specific heparan sulfate proteoglycan core protein|LOW QUALITY PROTEIN: basement membrane-specific heparan sulfate proteoglycan core protein|perlecan
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNANM_001001876
PolypeptideNP_001001876
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human3339ENSG00000142798MIM:224410MIM:142461
Mouse15530ENSMUSG00000028763All phenotypic alleles (8):Targeted, knock-out(3) Targeted, other(5) MGI:96257
Xenopus1004947856465356
Zebrafish565429ENSDARG00000076564ZDB-GENE-080807-4ZFIN:ZDB-GENE-080807-4
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene429806
Ensembl Gene
KEGGgga:429806
GEISHA IdHSPG2.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5’-TGCTGACGGTGGCATCTAC-3’
Reverse cDNA Template Primer5’-AATTAACCCTCACTAAAGGTGTGCAATGGCGTTGTGC-3’cDNA Template Length986
Complete cDNA Template Probeshow
TGCTGACGGTGGCATCTACCTCTGCGTGGGCACCAGTGCCGCCGGCACGGCCCGTGCCAGCATCGAGGTGGTGGTGGTG
CCAGGAGCTGCACCACCTGTGCGCATCGAGTCCTCATCACCTTCTGTGACTGAGGGACAGACTCTGGACCTGGACTGCG
TGGTGGCAGGACCTGGCCACGTCACCGTCACCTGGTACAGGCGCGGCGGCTCCCTGCCTGCAGGCCACCAGGTATCAGG
GTCCCGTCTCCGTGTCCCCCATGTCACCATGGCTGATTCAGGCGAGTACGTGTGCCGGGCGAGCTCAGGGACCAGTGTC
CGGGAGGCGTCTGTCATCGTCACTGTAGTGTCCAGTTCTGGTTTGTCCTATGGACCACCGGCCTCAGGTGGCCAGGCTC
CTGTCAGGATTGAGGCGTCCTCCTCCGCGGTGGCTGAGGGACAGACCCTGGACCTCAACTGTGTCATCGCTAGCGGCTT
GCAGGCCACTGTCACCTGGTACAAGCGCGGTGGGTCCCTGCCAGCCAGGCACCAGGTGTCCGGCTCCCGCCTGCGGCTG
CTGCAGGTGACAGCAGCTGACTCAGGCGAGTACGTGTGCCGGGTGAGCAGCGGGGCCACCACCAAGGAAGCCAGCGTCA
TGGTGACAATCCAGCCCAGCGGGGCCAGCTCCTACCCCTCAGGTGGCACGACACCGCTGCGCATCGAGTCCTCGTCGTC
CACTGTTACTGAGGGACAGACCCTGGACCTCAACTGTGTCATTGCCAGCCCTGCACAAGCCACTGTCACCTGGTACAAG
CGCGGTGGGTCCCTGCCAGCCAGGCACCAGGTGTCCGGCTCCCGCCTGCGGCTGCTGCAGGTGACAGCAGCTGACTCAG
GCGAGTACGTGTGCCGGGTGAGCAGCGGGGCCACCACCAAGGAAGCCAGCGTCATGGTGACAATCCAGCCCAGCGGGGC
CAGCTCCTACCCCCCAGGTGGCACAACGCCATTGCACA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
Primitive Streak
Unlabeled
very faint
7-12
stage 7
stage 9
Extraembryonic Mesoderm
Head Mesenchyme
Lateral Plate Mesoderm
Neural Plate/Tube
Somites
 
13-18
stage 13
Anterior Intestinal Portal
Extraembryonic Mesoderm
Forebrain
Head Mesenchyme
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Somites
 
19-24
stage 19
stage 20
stage 24
stage 24
stage 24
stage 24
Aorta
Atria
Ear/Otic Placode
Foregut
Head Mesenchyme
Leg Mesenchyme
Lens
Liver
Lung
Myotome
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Spinal Cord
Spinal Ganglia and Nerves
Ventricles
Widespread Expression
Wing Mesenchyme
 
25-27
stage 27
Widespread Expression
 

Mouse

Emage
MGI GXDMGI:96257

Frog

Xenbase6465356

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-080807-4
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