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MSC musculin Gene Summary Expression Other Species Expression JBrowse Gene Official Symbol MSC Official Full Name musculin CGNC ID 13879 also known as musculin|musculin (activated B-cell factor-1) gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Gene Ontology Molecular Function Biological Process Cellular Component
Links to other databases
Entry 1 GEISHA Id pgm2n.pk009.j5 Data Source GEISHA ISH Analysis Forward cDNA Template Probe show AAGCTCTCCAAGCTGGACACGCTGCGCCTGGCCTCCAGCTACATCGCGCACCTCCGGCAGCTGCTGCAAGAGGACCGCT ACGAGAACGGCTACGTGCACCCCGTCAACCTGACTTGGCCATTTGTGGTCTCGGGACGACCCGACGCTGACACCAAAGA CGTCTCTGCCGCCAGCAGATTATGTGGAACTACCGCTTAGCCAAATTCTTTCCCTTAGAGCTCTGAGGGAAGTCTATTT AAAGCAGTAAAGGAAGGAGATGCTGGAAAGGAGAGCTGTTACGGACTGACTGCAGCCGCTGAAGTCTGAGATTTGGAAA AGCCTTTCCTGGGCTTTGCCATTCGTGCCGCTGCCTGAGGACCTGTTGTTCTGAGGCTATTAAACTAATGGAAGAGGAA CAGAATGATGTAGAATTAACAGCATGGACCAAAATGCAACTCTACAAACTAACCCCAACCAGTGTTATTTGTATTCTAA AGCAAAGCAGTATTTTAGAGTAGCTTCGAAACTCAGATTTATAATATATTTTGATGGCTTTTGTATTCACGGGTCGGGT TTACTGTAACTATGCAATAAGTGTAACCATACTTTGTTTTTGTCCTTTTAACCGGAGTTTTCCTGGAAATATGTAAGCA GCTACATTCTGCATGTAGGCTACCACCCAATGGAATGAAACTAATTCCTTTGGTTATGCCTTGACGTGCCACGTGTAAG GACGTGNGGCTGTCCCCAAGATGTGGCACAGTTTCTACATCTTAATATGGAAGAGAAATTCTGCTCACTGAAAGGCCAG GGTGCACGTGCTGCAAAGAATGAATTGTGTGATGCTGCAATACAGC
Entry 2 GEISHA Id MyoR.Bothe.2006 Data Source Publication Complete cDNA Template Probe show TCTTCTTATATCCCCCTGTTGAACGTTTACGCGAGCGTTCACCCGTCCTTTCCCTCGCGGGGCTCTCCCGCAGAGCCCG ATACCCCGCAGCCCACGGGGCGGCCCCGCGCCCCTCCGCGCCCCTCCGCGCGGCGCGGCGCCGCGCCGGGCATTGCGGG AGGCACCGCCCCACCGCGGGGCTCGGCCGGGGGCTGCCCCCTCCTCCTCCCCCCGGCCCGGCCGCCTCTCGGCCCCGCG GCCGCCGCTATATAGCGCTGTGCGGGGGCGCATCCCCCCGCCGCTCCCCCCGCGCCTCCGCACGGACTCTCCGCGGCGG GGCCGCCCCGCGCTGCCCGCAGCCGCCTCGGCCGCCCGCCCTGCCGCCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCAG CCGCCGCCGCCGCCTCCCCCCGGGGCCATGTCAACGGGCTCCGGGAGCGAGGCGGAGGAGCTGCCCGAGATGGACCTGC GGGCGCTGCAGCTGGACTACCCGGCGGCGGGCAAGCGGCAGCCCCGTGGCGAGCTCTACCCCTCGGGGGACAACTCCTC GGCGGCGGAGGAGGAGGAGGAGGA
Citation Bothe I, Dietrich S. The molecular setup of the avian head mesoderm and its implication for craniofacial myogenesis. Dev Dyn. 2006 Oct;235(10):2845-60. Copyright Copyright © 2006 Wiley-Liss, Inc. Comments Probe sequence is nt 649-1226 of GenBank entry XM_418293
Entry 3 GEISHA Id MyoR.Dastjerdi.2007 Data Source Publication Complete cDNA Template Probe show AGAGGGGAAGCAGTCGCAGCGCAACGCGGCCAACGCGCGGGAGCGGGCGCGGATGCGGGTGCTGAGCAAAGCGTTCTCC CGGCTGAAGACCAGCCTGCCCTGGGTGCCCCCCGACACCAAGCTCTCCAAGCTGGACACGCTGCGCCTGGCCTCCAGCT ACATCGCGCACCTCCGGCAGCTGCTGCAAGAGGACCGCTACGAGAACGGCTACGTGCACCCCGTCAACCTGACTTGGCC ATTTGTGGTCTCGGGACGACCCGACGCTGACACCAAAGACGTCTCTGCCGCCAGCAGATTATGTGGAACTACCGCTTAG CCAAATTCTTTCCCTTAGAGCTCTGAGGGAAGTCTATTTAAAGCAGTAAAGGAAGGAGATGCTGGAAAGGAGAGCTGTT ACGGACTGACTGCAGCCGCTGAAGTCTGAGATTTGGAAAAGCCTTTCCTGGGCTTTGCCATTCGTGCCGCTGCCTGAGG ACCTGTTGTTCTGAGGCTATTAAACTAATGGAAGAGGAACAGAATGATGTAGAATTAACAGCATGGACCAAAATGCAAC TCTACAAACTAACCCCAACCAGTGTTATTTGTATTCTAAAGCAAAGCAGTATTTTAGAGTAGCTTCGAAACTCAGATTT ATAATATATTTTGATGGCTTTTGTATTCACGGGTCGGGTTTACTGTAACTATGCAATAAGTGTAACCATACTTTGTTTT TGTCCTTTTAACCGGAGTTTTCCTGGAAATATGTAAGCAGCTACATTCTGCATGTAGGCTACCACCCAATGGAATGAAA CTAATTCCTTTGGTTATGCCTTGACGTGCCACGTGTAAGGACGTGGGGCTGTCCCCAAGATGTGGCACAGTTTCTACAT CTTAATATGG
Citation Dastjerdi A, Robson L, Walker R, Hadley J, Zhang Z, Rodriguez-Niedenführ M, Ataliotis P, Baldini A, Scambler P, Francis-West P. Tbx1 regulation of myogenic differentiation in the limb and cranial mesoderm. Dev Dyn. 2007 Feb;236(2):353-63. Copyright Copyright © 2007 Wiley-Liss, Inc. Comments Authors indicated ""A 1,200-bp cMyoR cDNA fragment was generated using 5AGA GGG GAA GCA GTC GCA G 3 and 5ACA GCA TTC GGA TTA GTG AAG 3 primers." The probe listed begins with the first primer, but only 879 bases 3' of that are currently associated with this transcript in ensembl. These are listed here as probe sequence.
Entry 4 GEISHA Id MYOR.Bothe.2007 Data Source Publication Complete cDNA Template Probe show ATGCTCATTGCAGGAGAATCGGACCAGGAGACCTTTAATAGTCCATCCCAACTCAAACGATTCTACGATTCCATGACTT TCCTTTCCGTCCAGCAGCTCCGAGCTGTCACTTCGTGCTGTCTTCACCACCGTCCCAGCGGCCGTGTGCCCCAACGAGA GCGAGCAGTGACCCCCCCGGCGGGTCCCGGGGGAGCCGCCCCCACCCCCTCCGCCTCCGCCCGGCCGAAGCTAACTGGG GAGGCCAAGCAGCCCCCAAGTCTGGCGCACACCCCTTCCTCAGTGCCAGCGAGAGCATCTCAGTGTCAACCCGAGTTCA AGAGATCCAGTTGCAGGATCAGCCGCGTGTTTCGGCGCTTCAAGCAATGTCAAGTTTCCCTTGGAAGGGCTGCTCCCAA ACCCGGCTCTGATGTGGTTCTGGCCCCAGCGGGCGAAGCCGAGGTTTACACAGCGTTAAGTGGCCGCGGGCCGCTGAGC GCTGGGCGAAAGCACGGCCGCGGGTGCCAGGAAAGTCGCTCTGCGGCAGCGGGAAGGTTCCACTTAACTCGGGAGGGAA ATACAGGGCCGGGAGGGCAGCGGGGAAGCAATGTGTTGCTTATTCATCCTGGGAAGAGGCGGCGTCTGGGGCGCGGTAG GGATGCACCTCGGGGGCTCTTCTTATATCCCCCTGTTGAACGTTTACGCGAGCGTTCACCCGTCCTTTCCCTCGCGGGG CTCTCCCGCAGAGCCCGATACCCCGCAGCCCACGGGGCGGCCCCGCGCCCCTCCGCGCCCCTCCGCGCGGCGCGGCGCC GCGCCGGGCATTGCGGGAGGCACCGCCCCACCGCGGGGCTCGGCCGGGGGCTGCCCCCTCCTCCTCCCCCCGGCCCGGC CGCCTCTCGGCCCCGCGGCCGCCGCTATATAGCGCTGTGCGGGGGCGCATCCCCCCGCCGCTCCCCCCGCGCCTCCGCA CGGACTCTCCGCGGCGGGGCCGCCCCGCGCTGCCCGCAGCCGCCTCGGCCGCCCGCCCTGCCGCCGCCGCCGCCGCCGC AGCAGCAGCAGCAGCAGCCGCCGCCGCCGCCTCCCCCCGGGGCCATGTCAACGGGCTCCGGGAGCGAGGCGGAGGAGCT GCCCGAGATGGACCTGCGGGCGCTGCAGCTGGACTACCCGGCGGCGGGCAAGCGGCAGCCCCGTGGCGAGCTCTACCCC TCGGGGGACAACTCCTCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGACGGCGAGGGCA GCTGTGCGGCGGGGCCGGCGGGCTGCAAGAGGAAGCGGGCGAGGGGCAGCGGCCCCGGGGGCAAGAAGGCGCCGTCGGG GCCGCGGGGGCCGGCGGCAGAGGGGAAGCAGTCGCAGCGCAACGCGGCCAACGCGCGGGAGCGGGCGCGGATGCGGGTG CTGAGCAAAGCGTTCTCCCGGCTGAAGACCAGCCTGCCCTGGGTGCCCCCCGACACCAAGCTCTCCAAGCTGGACACGC TGCGCCTGGCCTCCAGCTACATCGCGCACCTCCGGCAGCTGCTGCAAGAGGACCGCTACGAGAACGGCTACGTGCACCC CGTCAACCTGACTTGGCCATTTGTGGTCTCGGGACGACCCGACGCTGACACCAAAGACGTCTCTGCCGCCAGCAGATTA TGTGGAACTACCGCTTAGCCAAAGTAATTTTTTTCCTTGTTGATCATTTTTTTTACGGGCTGGATGTTTTTAAGAGCTG TGATTTGTCGGCTCGAGACCAGAAGATGGGGACCAAACCCCGTCTCTGTGTGTTAAATCTGTGTTTCCCCTCAGTTCTT TCCCTTAGAGCTCTGAGGGAAGTCTATTTAAAGCAGTAAAGGAAGGAGATGCTGGAAAGGAGAGCTGTTACGGACTGAC TGCAGCCGCTGAAGTCTGAGATTTGGAAAAGCCTTTCCTGGGCTTTGCCATTCGTGCCGCTGCCTGAGGACCTGTTGTT CTGAGGCTATTAAACTAATGGAAGAGGAACAGAATGATGTAGAATTAACAGCATGGACCAAAATGCAACTCTACAAACT AACCCCAACCAGTGTTATTTGTATTCTAAAGCAAAGCAGTATTTTAGAGTAGCTTCGAAACTCAGATTTATAATATATT TTGATGGCTTTTGTATTCACGGGTCGGGTTTACTGTAACTATGCAATAAGTGTAACCATACTTTGTTTTTGTCCTTTTA ACCGGAGTTTTCCTGGAAATATGTAAGCAGCTACATTCTGCATGTAGGCTACCACCCAATGGAATGAAACTAATTCCTT TGGTTATGCCTTGACGTGCCACGTGTAAGGACGTGGGGCTGTCCCCAAGATGTGGCACAGTTTCTACATCTTAATATGG AAGAGAAATTCTGCTCACTGAAAGGCCAGGGTGCACGTGCTGCAAAGAATGAATTGTGTGATGCTGCAATACAGCAAGG ATTCAAAACGTGTTAAACATTATCTTCTGTACTGCCACGCTTCTCTTTGATAAGTTTACACTCAAATGAGTTCTAGTGA TGTTTCTTCACTAATCCGAATGCTGTAATAAAAGGAGGATGCCATCAAATAAGTTGCAAATGTAAATAACTTTATTTTT TTATAAATGACATTAAAAGCTTGGTTACAATG
Citation Bothe I, Ahmed MU, Winterbottom FL, von Scheven G, Dietrich S. Extrinsic versus intrinsic cues in avian paraxial mesoderm patterning and differentiation. Dev Dyn. 2007 Sep;236(9):2397-409. Copyright Copyright © 2007 Wiley-Liss, Inc. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_418293).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-10 stage 10
stage 10
Head Mesenchyme
Entry 5 GEISHA Id MyoR.vonScheven.2006 Data Source Publication Complete cDNA Template Probe show ACTTGGCCATTTGTGGTCTCGGGACGACCCGACGCTGACACCAAAGACGTCTCTGCCGCCAGCAGATTATGTGGAACTA CCGCTTAGCCAAAGTAATTTTTTTCCTTGTTGATCATTTTTTTTACGGGCTGGATGTTTTTAAGAGCTGTGATTTGTCG GCTCGAGACCAGAAGATGGGGACCAAACCCCGTCTCTGTGTGTTAAATCTGTGTTTCCCCTCAGTTCTTTCCCTTAGAG CTCTGAGGGAAGTCTATTTAAAGCAGTAAAGGAAGGAGATGCTGGAAAGGAGAGCTGTTACGGACTGACTGCAGCCGCT GAAGTCTGAGATTTGGAAAAGCCTTTCCTGGGCTTTGCCATTCGTGCCGCTGCCTGAGGACCTGTTGTTCTGAGGCTAT TAAACTAATGGAAGAGGAACAGAATGATGTAGAATTAACAGCATGGACCAAAATGCAACTCTACAAACTAACCCCAACC AGTGTTATTTGTATTCTAAAGCAAAGCAGTATTTTAGAGTAGCTTCGAAACTCAGATTTATAATATATTTTGATGGCTT TTGTATTCACGGGTCGGGTTTACT
Citation von Scheven G, Bothe I, Ahmed MU, Alvares LE, Dietrich S (2006). Protein and genomic organisation of vertebrate MyoR and Capsulin genes and their expression during avian development.
Gene Expr Patterns. Apr;6(4):383-93. Epub 2006 Jan 18. Copyright Copyright © 2005 Elsevier B.V. All rights reserved. Comments Gene specific primers were designed on the basis of the sequences available on the NCBI, the Ensembl and chick EST databases (http://www.ncbi.nlm.nih.gov/, http://www.ensembl.org/index.html, http://www.chick.umist.ac.uk), with MyoR forward: CGCGAATTCACTTGGCCATTTGTGGTCTC; MyoR reverse: CGCTCTAGAGTAAACCCGACCCGTGAATA, Located primers in NCBI Accession # XM_418293.
Entry 6 GEISHA Id MYOR.Bothe.2011 Data Source Publication Complete cDNA Template Probe show CGCACGGACTCTCCGCGGCGGGGCCGCCCCGCGCTGCCCGCAGCCGTTTCGGCCGCCCGCCCTGCCGCCGCCGCCGCCG CCGCAGCATTAGCAGCAGCAGCCGCCGCCGCCGCCTCCCCCCGGGGCCATGTCAACGGGCTCCGGGAGCGAGGCGGAGG AGCTGCCCGAGATGGACCTGCGGGCGCTGCAGCTGGACTACCCGGCGGCGGGCAAGCGGCAGCCCCGTGGCGAGCTCTA CCCCTCGGGGGACAACTCCTCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGACGGCGAG GGCAGCTGTGCGGCGGGGCCGGCGGGCTGCAAGAGGAAGCGGGCGAGGGGCAGCGGCCCCGGGGGCAAGAAGGCGCCGT CGGGGCCGCGGGGGCCGGCGGCAGAGGGGAAGCAGTCGCAGCGCAACGCGGCCAACGCGCGGGAGCGGGCGCGGATGCG GGTGCTGAGCAAAGCGTTCTCCCGGCTGAAGACCAGCCTGCCCTGGGTGCCCCCCGACACCAAGCTCTCCAAGCTGGAC ACGCTGCGCCTGGCCTCCAGCTACATCGCGCACCTCCGGCAGCTGCTGCAAGAGGACCGCTACGAGAACGGCTACGTGC ACCCCGTCAACCTGACTTGGCCATTTGTGGTCTCGGGACGACCCGACGCTGACACCAAAGACGTCTCTGCCGCCAGCAG ATTATGTGGAACTACCGCTTAGCCAAATTCTTTCCCTTAGAGCTCTGAGGGAAGTCTATTTAAAGCAGTAAAGGAAGGA GATGCTGGAAAGGAGAGCTGTTACGGACTGACTGCAGCCGCTGAAGTCTGAGATTTGGAAAAGCCTTTCCTGGGCTTTG CCATTCGTGCCGCTGCCTGAGGACCTGTTGTTCTGAGGCTATTAAACTAATGGAAGAGGAACAGAATGATGTAGAATTA ACAGCATGGACCAAAATGCAACTCTACAAACTAACCCCAACCAGTGTTATTTGTATTCTAAAGCAAAGCAGTATTTTAG AGTAGCTTCGAAACTCAGATTTATAATATATTTTGATGGCTTTTGTATTCACGGGTCGGGTTTACTGTAACTATGCAAT AAGTGTAACCATACTTTGTTTTTGTCCTTTTAACCGGAGTTTTCCTGGAAATATGTAAGCAGCTACATTCTGCATGTAG GCTACCACCCAATGGAATGAAACTAATTCCTTTGGTTATGCCTTGACGTGCCACGTGTAAGGACGTGGGGCTGTCCCCA AGATGTGGCACAGTTTCTACATCTTAATATGGAAGAGAAATTCTGCTCACTGAAAGGCCAGGGTGCACGTGCTGCAAAG AATGAATTGTGTGATGCTGCAATACAGCAAGGATTCAAAACGTGTTAAACATTATCTTCTGTACTGCCACGCTTCTCTT TGATAAGTTTACACTCAAATGAGTTCTAGTGATGTTTCTTCACTAATCCGAATGCTGTAATAAAAGGAGGATGCCATCA AATAAGTTGCAAATGTAAATAACTTTATTTTTTTATAAATGACATTAAAAGCTTGGT
Citation Bothe I, Tenin G, Oseni A, Dietrich S., Dynamic control of head mesoderm patterning., Development. 2011 Jul;138(13):2807-21. Copyright Permission from the authors and the Company of Biologists Ltd. Copyright held by the authors. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #XM_418293.3 ).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-10 stage 10
stage 10
Head Mesenchyme
Entry 7 GEISHA Id MYOR.Grenier.2009 Data Source Publication Complete cDNA Template Probe show CGCACGGACTCTCCGCGGCGGGGCCGCCCCGCGCTGCCCGCAGCCGTTTCGGCCGCCCGCCCTGCCGCCGCCGCCGCCG CCGCAGCATTAGCAGCAGCAGCCGCCGCCGCCGCCTCCCCCCGGGGCCATGTCAACGGGCTCCGGGAGCGAGGCGGAGG AGCTGCCCGAGATGGACCTGCGGGCGCTGCAGCTGGACTACCCGGCGGCGGGCAAGCGGCAGCCCCGTGGCGAGCTCTA CCCCTCGGGGGACAACTCCTCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGACGGCGAG GGCAGCTGTGCGGCGGGGCCGGCGGGCTGCAAGAGGAAGCGGGCGAGGGGCAGCGGCCCCGGGGGCAAGAAGGCGCCGT CGGGGCCGCGGGGGCCGGCGGCAGAGGGGAAGCAGTCGCAGCGCAACGCGGCCAACGCGCGGGAGCGGGCGCGGATGCG GGTGCTGAGCAAAGCGTTCTCCCGGCTGAAGACCAGCCTGCCCTGGGTGCCCCCCGACACCAAGCTCTCCAAGCTGGAC ACGCTGCGCCTGGCCTCCAGCTACATCGCGCACCTCCGGCAGCTGCTGCAAGAGGACCGCTACGAGAACGGCTACGTGC ACCCCGTCAACCTGACTTGGCCATTTGTGGTCTCGGGACGACCCGACGCTGACACCAAAGACGTCTCTGCCGCCAGCAG ATTATGTGGAACTACCGCTTAGCCAAATTCTTTCCCTTAGAGCTCTGAGGGAAGTCTATTTAAAGCAGTAAAGGAAGGA GATGCTGGAAAGGAGAGCTGTTACGGACTGACTGCAGCCGCTGAAGTCTGAGATTTGGAAAAGCCTTTCCTGGGCTTTG CCATTCGTGCCGCTGCCTGAGGACCTGTTGTTCTGAGGCTATTAAACTAATGGAAGAGGAACAGAATGATGTAGAATTA ACAGCATGGACCAAAATGCAACTCTACAAACTAACCCCAACCAGTGTTATTTGTATTCTAAAGCAAAGCAGTATTTTAG AGTAGCTTCGAAACTCAGATTTATAATATATTTTGATGGCTTTTGTATTCACGGGTCGGGTTTACTGTAACTATGCAAT AAGTGTAACCATACTTTGTTTTTGTCCTTTTAACCGGAGTTTTCCTGGAAATATGTAAGCAGCTACATTCTGCATGTAG GCTACCACCCAATGGAATGAAACTAATTCCTTTGGTTATGCCTTGACGTGCCACGTGTAAGGACGTGGGGCTGTCCCCA AGATGTGGCACAGTTTCTACATCTTAATATGGAAGAGAAATTCTGCTCACTGAAAGGCCAGGGTGCACGTGCTGCAAAG AATGAATTGTGTGATGCTGCAATACAGCAAGGATTCAAAACGTGTTAAACATTATCTTCTGTACTGCCACGCTTCTCTT TGATAAGTTTACACTCAAATGAGTTCTAGTGATGTTTCTTCACTAATCCGAATGCTGTAATAAAAGGAGGATGCCATCA AATAAGTTGCAAATGTAAATAACTTTATTTTTTTATAAATGACATTAAAAGCTTGGT
Citation Grenier J, Teillet MA, Grifone R, Kelly RG, Duprez D.. Relationship between Neural Crest Cells and Cranial Mesoderm during Head Muscle Development. PLoS ONE. 2009; 4(2): e4381. Published online 2009 February 9. Copyright Copyright Grenier et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # XM_418293.3).
Mouse Frog Fruit Fly Zebra Finch Zebrafish