GEISHA - A Chicken Embryo Gene Expression Database
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AvBD1
avian beta-defensin 1

Gene
Official SymbolAvBD1
Official Full Nameavian beta-defensin 1
CGNC ID49508
also known asGAL 1, GAL1, gallinacin-1 alpha|Gal 1-alpha|antimicrobial peptide 1|antimicrobial peptide CHP2|beta-defensin 1 antimicrobial peptide|chicken heterophil peptide 2|gal-1 alpha|gallinacin 1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_204993
PolypeptideNP_990324
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Processdefense response to bacterium, defense response to fungus, killing of cells of other organism
Cellular Componentextracellular region
Links to other databases
Entrez Gene395841
Ensembl GeneENSGALG00000022815
KEGGgga:395841
GEISHA IdAvBD1.Zhang.2019Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GGATGCACGCTGTTCTTGGTGGGGTTCTTACTTCCTTGCTGTACCCTGAGAAACCATTGTCAGCCCTGTGAAAACCCGG
GACAGACGTAAACCATGCGGATCGTGTACCTGCTCCTCCCCTTCATCCTCCTCCTGGCCCAGGGTGCTGCAGGATCCTC
CCAGGCTCTAGGAAGGAAGTCAGATTGTTTTCGAAAGAGTGGCTTCTGTGCATTTCTGAAGTGCCCTTCCCTCACTCTC
ATCAGTGGGAAATGCTCAAGATTTTACCTCTGCTGCAAAAGAATATGGGGCTGAAGAGCCAGACATCCCAAGCAGGACA
TCACCCTGGCTTCTCGCTTCTGGAAACTTCCCCCATTGACCTCTCCCCTTCCCACCTCTGCAGTCTCCCATGGTGTGAG
CGTGGCAGTAGAAGTTGGAGACATCCCACCATGGGCCTGCAGTTGTTTGGCCAGTTGCTGCTTTTCCCTGCTGAATAAA
GGTGTGCAGTTTAGCATTGCAAAAAAAAAA
CitationHaihan Zhang, Eric A Wong. Expression of avian β-defensin mRNA in the chicken yolk sac. Dev Comp Immunol. 2019 Jun;95:89-95. Epub 2019 Feb 10. DOI: 10.1016/j.dci.2019.02.006.
CopyrightCopyright © 2019 Elsevier Ltd. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_001001609.2). AvBD1 is also known as GAL 1 in NCBI.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-44
stage 31
stage 37
stage 41
stage 41
stage 44
Yolk Sack or Stalk
Hematoxylin stain = purple staining
ISH = red staining
ISH = red staining;
Stage 44+ (e19);
all
 
 
  

Mouse

Emage
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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