GEISHA - A Chicken Embryo Gene Expression Database
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SORL1
sortilin related receptor 1

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolSORL1
Official Full Namesortilin related receptor 1
CGNC ID4976
also known asLR11, SorLA, SorLA-1, sortilin-related receptor|LDLR relative with 11 ligand-binding repeats|low-density lipoprotein receptor relative with 11 ligand-binding repeats|mosaic protein LR11|sortilin-related receptor, L(DLR class) A repeats containing|sorting protein-related receptor containing LDLR class A repeats
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNAXM_001232945
PolypeptideXP_001232946
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human6653ENSG00000137642MIM:104300MIM:602005
Mouse20660All phenotypic alleles (5):Targeted, knock-out(2) Targeted, other(2) Gene trapped(1) MGI:1202296
Xenopus100490681995775
Zebrafish497306ZDB-GENE-050208-22ZFIN:ZDB-GENE-050208-22
Gene Ontology
Molecular Function
Biological Processcholesterol metabolic process, endocytosis, lipid transport
Cellular Componentintegral component of membrane, low-density lipoprotein particle
Links to other databases
Entrez Gene395998
Ensembl GeneENSGALG00000006598
KEGGgga:395998
GEISHA IdSORL1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5’-AAAGGCTTCTTTGTGCTGCG-3’
Reverse cDNA Template Primer5’-AATTAACCCTCACTAAAGGAAGGCTGTCACTGTTAGGGC-3’cDNA Template Length859
Complete cDNA Template Probeshow
AAAGGCTTCTTTGTGCTGCGGTGCTGTGAGCGCTGCCAGGAGGCGGTCTGCTGGAATACCATACTCCAAAAATGCCCCC
AGTGCAATGCAGTGATGGCCTGTGCAGTGCAGCCCTTGCCTTTGTGCAGAGCTCCTGCACCTCTGATCACTGCAATGCA
ATGCCCGGGCACCCCCTCACAGTGCAAAAATCCCCGCTGTGCTCTCAGCAAAGCGACTTTACAGGGCTAGTGTATTTTA
TATATAAATAGAGAAGTCTAAGCTCCAGGCAGGGAATGGGCAGGATAGATGCAGTTCTGGGTAAATTGTATATTTTTAT
GAACTTTTGAAGCATGGAATCTTGTTCACAGAGATGTATATGGGGCGGGAGGGTTCTGGTGTACATACGGTACATGGAT
GTGGATGCATATTTTGTTCCTTTTTTCTTTTTACTTTTTTTTTTTCAGTAGCTTGATGCAATGGGACGTGAATCCTTTC
CCTTTTGGGAGATGGCCTGGGTTGGCCTGATGGGAACCCAGTGAATTGTTGGGATCCATAAGGAGAAAAGGGGTATGGG
AGGCACAGGGGCTGGGAGGAACTTCTGGTGCCTGTGTTTGAGCCCACTGAAGATGCTGGCTGGTGTTCTTAAGTCCATT
TGAACAACAAACTGAGGCTGTAAAGGTCCTTTGTGTTCTCAGGTCAGAGCAGACTTCAGCAATTCACAGGTGGAAAGGT
AAAACTCCATTCAGGAAAGACCCAAATAGCATTTCCAGAAACAACCTTCGATCTCCTTCAAATGGACTTCAGAACAAAC
AGGGTGCCATGGAGTTATTTACTCCGGGATCCGGAGAGCTCCTGGTACAGCCCTAACAGTGACAGCCTT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 6
Epiblast
Primitive Streak
 
7-12
stage 8
stage 12
Amnion
Anterior Intestinal Portal
Forebrain
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Somites
extraembryonic ectoderm
 
13-18
stage 16
Extraembryonic Blood Vessels
Foregut
Head Mesenchyme
Leg Mesenchyme
Neural Plate/Tube
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Somatic Mesoderm
Ventricles
Wing Mesenchyme
extraembryonic ectoderm
extraembryonic mesoderm
 
19-24
stage 19
stage 19
stage 23
stage 24
stage 24
Allantois
Extraembryonic Blood Vessels
Foregut
Head Mesenchyme
Heart
Leg Mesenchyme
Liver
Lung
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Widespread Expression
Wing Mesenchyme
Yolk Sack or Stalk
 
25-26
stage 26
Widespread Expression
 

Mouse

EmageMGI:1202296
MGI GXDMGI:1202296

Frog

Xenbase995775

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-050208-22
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