GEISHA - A Chicken Embryo Gene Expression Database
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JMJD1C
jumonji domain containing 1C

Gene
Official SymbolJMJD1C
Official Full Namejumonji domain containing 1C
CGNC ID2125
also known asprobable JmjC domain-containing histone demethylation protein 2C
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNANM_001199546
PolypeptideNP_001186475
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human221037ENSG00000171988MIM:604503
Mouse108829ENSMUSG00000037876All phenotypic alleles (2):Targeted, other(2) MGI:1918614
Xenopus1004875251008866
Zebrafish558436ZDB-GENE-121214-344, ZDB-GENE-130530-832ZFIN:ZDB-GENE-121214-344, ZFIN:ZDB-GENE-130530-832
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene423655
Ensembl Gene
KEGGgga:423655

Entry 1

GEISHA IdChEST411f13Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GGCGGCTCGAGGAACAGCGTTTCAGAAATTATTAAGCCGTGTACTGTCAATTTAATAGCTTCTACATCAAATGATCTGC
AAAATAACATAGATAGTAAAATCTTGGCAGATAAGTTTGTGAAGGAAGATAAGCACCCTAGGAGAAAAGCAAAACGAAC
TTACGAGTCTGGCTCTGAAAGCGGAGACTCTGATGAAAGCGAGAGCAAGTCAGAGCAAAGGACTAAGAGGCAGCCCAAG
CCAACTTACAAAAAGAAACAGAACGATTTGCAGAGGAAAAAGGGTGATGCGGAGGAAGAAGTAAAACCAAATGGTGTCC
TTAGCAGGAGTGCCAAAGAGAAAAGCAAGCTGAAGTTGCAGAGCGGCAGTAACAGCACTGGAATACCTCGCTCGGTGTT
AAAGGATTGGCGCAAAGTGAAGAAGCTGAAGCAAACAGGAGAGTCCTTCTTGCAGGATGATTCGTGCTCCGAAATTGGA
CCAAATTTGCAAAAATGCAGAGAATGTAGGTTAATAAGAAGCAAGAAGGGTGAAGAACCAACTCACTCGCCGGTGTTCT
GTAGGTTTTACTACTTCCGACGGTTATCTTTTAGTAAAAACGGAGTGGTTAGGATAGATGGTTTCTCCTCTCCTGATCA
GTATGATGATGAGGCACTGAGTTTATGGACACATGAAAACTATGAAGATGATGAACTGGACCTGGAAACTTGTAAATAT
ATTTTAGATATCATAGGGGACAAGTTTTGTCAGTTGGTAACATCGGAGAAAACAGCCATGTCCTGGGAAAAAAAG
Commentsno specific expression detected stages 4-18.
no images

Entry 2

GEISHA IdJMJD1C.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5’-TCCGTGCAATCTCACTCGG-3’
Reverse cDNA Template Primer5’-AATTAACCCTCACTAAAGGACGGTGCCTTGTGAGACAG-3’cDNA Template Length635
Complete cDNA Template Probeshow
TCCGTGCAATCTCACTCGGTTGGTTCTTTTAGAAATGACAGCAGGAGCCCTACTCAGTTGTCAGTCTCATCTTCAAATA
CACTCCGAAGCATGCCTGCCTTGCACAGAGCACCTGTGTTTCATCCCCCTGTGCACCAGAACCTGGAGAAGAAGGAAAG
CAGCTACAGCAGCCTTTCACCTCCCACTCTGACCCCTGTTCAACCTGTTAATGCTGGTGGTGGTAAGATACAGGAATTG
CAGAAACCACCAACTTTAGTACCTGAACCTAAGGAGGCTCAGACTGTTTACAAGGGCTCTTCTGATCAGAATTTATCAG
AAGCGTGGAAGTCTAACAACACCGCCGCTAATGAAAAGGTGGACTGGCATGGTGAGAGGGCGAGTGGAAAGGCACAGTC
CGCCACTGCATCTGTTATTGTACGTCCTCCTTCTAGCACGAAATACGAGTGCGTAGCAGCGGTGCAGTCAACTTCCAAA
GATCGAGTCAGTGAGAGATCTTCAGCTGTGACAAATCAAGCAGATTGCCTGAAAACAGCGGAAGCCAGGGAGACTGGAA
GAGTCATTCTGCCAAATATGAACTCAGACAGTGCTCGCACACAGTATGAAAAGAAATTTCCAGCTGTCTCACAAGGCAC
CGT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 8
stage 10
stage 12
Ear/Otic Placode
Forebrain
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Unlabeled
 
13-18
stage 18
Head Mesenchyme
Pharyngeal Arches and Clefts
 
19-24
stage 19
stage 22
stage 23
Cranial PNS
Head Mesenchyme
Leg Mesenchyme
Lung
Pharyngeal Arches and Clefts
Wing Mesenchyme
 
25
stage 25
Ear/Otic Placode
Head Mesenchyme
Leg Mesenchyme
Pharyngeal Arches and Clefts
Spinal Ganglia and Nerves
Wing Mesenchyme
 

Mouse

Emage
MGI GXDMGI:1918614

Frog

Xenbase1008866

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-121214-344, ZDB-GENE-130530-832
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