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A chicken embryo gene expression database

	Anatomical Location
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	Gene Name
	GEISHA ID
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CTSV
cathepsin V

Gene

Official Symbol	CTSV
Official Full Name	cathepsin V
CGNC ID	53096
also known as	CTSL, CTSL1, CTSL2, cathepsin L1\|cathepsin L\|cathepsin L2, Cathepsin L, Cathepsin L heavy chain; Cathepsin L light chain
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC

Sequence Information

Genomic
RNA	NM_001168009
Polypeptide	NP_001161481

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	36546			FBgn0013770
Human	1515	ENSG00000136943		MIM:603308
Mouse	13039	ENSMUSG00000021477	All phenotypic alleles (6):Spontaneous(1) Radiation induced(1) Targeted, knock-out(3) Targeted, other(1)	MGI:88564
Xenopus	548464, 444163, 448179, 447313			966213, 5907228
Zebrafish	321453, 30443	ENSDARG00000007836, ENSDARG00000039173	ZDB-GENE-030131-106, ZDB-GENE-980526-285	ZFIN:ZDB-GENE-030131-106, ZFIN:ZDB-GENE-980526-285

Gene Ontology

Molecular Function	cysteine-type peptidase activity
Biological Process	proteolysis
Cellular Component	lysosome

Links to other databases

Entrez Gene	427466
Ensembl Gene	ENSGALG00000012610
KEGG	gga:427466

Entry 1

GEISHA Id	S12	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show `GGCGGGTTCTGTTTCTGGCCCGGCGTCTATCAAGATTTGTCAACATGAACGTGTGTCTGACCATCCTGTCCCTGTGCTT GGGGCTGGCCTTTGCTGCACCGAGAGTAGATCCTGATTTGGACAGCCACTGGCAGCTGTGGAAGTCCTGGCACAGTAAA GATTATCATGAGAGAGAGGAAAGCTGGAGGAGAGTGGTGTGGGAGAAGAATCTGAAAATGATTGAACTCCATAACCTGG ATCACTCATTAGGAAAACACAGTTATAAGTTGGGGATGAATCAGTTTGGTGACATGACAGCAGAGGAGTTCAGACAGCT GATGAATGGCTATAAACACAAGAAGTCAGAAAGGAAGTACAGAGGATCCCAGTTTCTTGAGCCCAGCTTCCTTGAAGCA CCACGATCTGTTGACTGGAGAGAGAAGGGATATGTAACTCC`
Comments	no other stages available yet

Stage

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7-8

stage 8

Area Opaca

Entry 2

GEISHA Id	Cathepsin.L.Zuzarte-Luis.2007a	Data Source	Publication
Complete cDNA Template Probe	show GCTTGAGCGCTGGCCCGATGCGGGTTCTGTTTCTGGCCCGGCGTCTATCAAGATTTGTCAACATGAACGTGTGTCTGAC CATCCTGTCCCTGTGCTTGGGGCTGGCCTTTGCTGCACCGAGAGTAGATCCTGATTTGGACAGCCACTGGCAGCTGTGG AAGTCCTGGCACAGTAAAGATTATCATGAGAGAGAGGAAAGCTGGAGGAGAGTGGTGTGGGAGAAGAATCTGAAAATGA TTGAACTCCATAACCTGGATCACTCATTAGGAAAACACAGTTATAAGTTGGGGATGAATCAGTTTGGTGACATGACAGC AGAGGAGTTCAGACAGCTGATGAATGGCTATAAACACAAGAAGTCAGAAAGGAAGTACAGAGGATCCCAGTTTCTTGAG CCCAGCTTCCTTGAAGCACCACGATCTGTTGACTGGAGAGAGAAGGGATATGTAACTCCAGTTAAAGACCAGGGTCAGT GTGGCTCTTGCTGGGCTTTCAGCACAACAGGAGCTCTTGAAGGCCAGCACTTCAGAAAAACTGGAAAACTTGTTTCACT CAGTGAACAGAATCTTGTAGACTGCTCCCGCCCAGAAGGAAATCAAGGCTGCAATGGTGGTCTCATGGACCAGGCTTTC CAGTATGTACAAGATAATGGGGGAATTGATTCAGAGGAATCCTATCCATACACTGCAAAGGATGATGAAGACTGTCGCT ACAAGGCAGAGTACAATGCTGCTAATGATACTGGCTTTGTTGACATCCCTCAAGGACATGAAAGAGCTCTCATGAAAGC AGTAGCATCTGTGGGTCCAGTGTCTGTTGCTATTGATGCAGGACACTCCTCATTCCAGTTTTATCAGTCAGGTATCTAC TATGAACCAGACTGTAGCAGTGAAGATTTGGACCACGGTGTTCTGGTTGTAGGTTATGGTTTTGAAGGTGAAGATGTAG ATGGAAAGAAATACTGGATTGTTAAGAACAGCTGGGGTGAGAAGTGGGGTGACAAAGGATATATCTACATGGCCAAAGA CAGGAAGAACCACTGTGGAATAGCAACAGCTGCTAGTTATCCACTTGTATAATTTGAAGACTGAGCATTTCAGCGCAAA AGGGGATAATAAACTGAATGACCAAACACACATTCACACAGGTGGTAGACTTGTATTCTTCAAAAGTCAACTTGATTTT TAAAAAAAAAAAAACTCTTGAAGTCTGTTTTACATGTTGATGACATGCCACTTACTTTAAATTAATGTGAATGTTGGTA TGTAAACAGCTTGTAATATTGCTGGCTTTTAACTGCTTAATCTAATAGATTCTTCTATGTATTTTTTCTTTTTTAATTA GAAATGTACTCAAAGGTTTACTTTTTAAATAAACACTTAATTTAGTGTGTACAGA
Citation	Zuzarte-Luis V, Montero JA, Kawakami Y, Izpisua-Belmonte JC, Hurle JM. Lysosomal cathepsins in embryonic programmed cell death. Dev Biol. 2007 Jan 1;301(1):205-17. Epub 2006 Aug 12.
Copyright	2006 Elsevier Inc. All rights reserved.
Comments	Authors said: Chicken cathepsin L (cCatL) was obtained from the cDNA library described in Zuzarte-Luis et al., 2004 ). Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # XM_425038).