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A chicken embryo gene expression database

	Anatomical Location
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	Gene Name
	GEISHA ID
	Multiple Parameters

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SLC16A2
solute carrier family 16 member 2

The human orthologue of this gene is associated
with the following human disease:

Allan-Herndon-Dudley syndrome

Gene

Official Symbol	SLC16A2
Official Full Name	solute carrier family 16 member 2
CGNC ID	5859
also known as	monocarboxylate transporter 8\|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)\|solute carrier family 16, member 2 (thyroid hormone transporter)
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC

Sequence Information

Genomic
RNA	XM_426274
Polypeptide	XP_426274

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	6567	ENSG00000147100	MIM:300523	MIM:300095
Mouse	20502	ENSMUSG00000033965	All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2)	MGI:1203732
Xenopus	100494635			980578
Zebrafish			ZDB-GENE-120117-1	ZFIN:ZDB-GENE-120117-1

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	428716
Ensembl Gene
KEGG	gga:428716

Entry 1

GEISHA Id	MCT8.Kimura.2011	Data Source	Publication
Complete cDNA Template Probe	show ATGTGGGACCGGCTGCGGGGCAGTCGGGCGGCGGGCGGCGGCCGGAGCGCGGCCGCGATGGCGCAGCGCGGGGAGGAGG GCGGCGAGCGGGGGCCGGCGGAGGAGGGCGGGGAGGGAGAGCCCCGGGCCGGGGCCGAGCGGGGGCCGAGCGGGGCCGC CGCGCCCTTCCAGCCTCCCGAGGGCGGCTTCGGCTGGGTCGTGGTCTTCGCCGCCGCCTGGTGCAATGGCTCCATCTTC GGCATCCACAACTCCTTCGGGATCATCTACACCATGTTGCAGAGCGACCTGGGCGAGGACGAGAAGGACCCCACGCTGG AGTTTAAAACAGCATGGGTTGGCTCTTTGGCCATGGGCATGATTTTCTTCTGCTCTCCCATCGTGAGCATCTTCACTGA CCGCATCGGCTGCAGGACCACAGCAGCCTTGGGAGCTGCCATCGCTTTCATCGGGCTCCTCTCCAGCTCCTTCACCAAG TCTCTGGAAGTTCGCTATTTCACGTATGGCATCCTCTTTGGCTGTGGCAGCTCCTTTGCCTTTCAGCCCTCGCTGGTCA TCCTTGGTCACTACTTCAAGCGTCGCCTTGGCCTGGCCAATGGCATCGTGGCTGGCAGCAGCTGCCTCATCTCTGTGCC GCTGCCCTTCTTCCTGAAGATGGTGGGAAAGGCCATTGGGCTGGCACACACATTCCAAGTGCTCAGTGCCTTAATGCTC ATCCAGATCTTCTTGTCGATGACATATCGGCCCCTCCTGCCACCCTCCTGTGACTCTCAGCACGATGGGCAGGACAAAC TGGGCAGCCGGAGTGTGCGGCAGCAGTGCTGGGCCCAGATGCGCAAGTATTTCAACTTGAGGGTTTTCCGGAGAAAGAC CTACCGAATTTGGGCCTTTGGGATTGCTACAGCTGTCCTGGGGTATTTTGTACCATACATGCACCTGGTGAAATATGTG GAGAAGGAATTTGGAGAAACCAAAAACGACTGGATTCTCCCAGTCTGTCTTGGAGGCATGTCTGGGCTGGGGCGCTTGA TTTCGGGCCGCACTGGGGACTGCATTCCTGGGCTGAAGAAGATTTATCTGCAGGTCGCGTCCTTTGTTCTGTTCGGCAT CATGTGCATGATGATCCCGCAGTGCCGAGGGTTTGAGGGCGTCATCGTCATCTGCCTCTTCCTCGGCCTTTGCGATGGC TGCTTCACCACCATTATGGCCCCCGTTGCCTTTGAGCTGGTGGGGCCTATGCAAGCATCCCAGGCCATAGGGTACCTGA TGGGGCTGATGGCTGTGCCCATGACTGCGGGCACGCCAATTGCAGGATACTTCAACGATTATTTTCAGAATTACCATGC GGGTTTTTACTTCGCCGGAGTGCCTCCCATCATCGGCGGCTTGGTGCTCTCCGTCGTCCCGCTGGTGCACCAGAGGATG CTGCAGAAGCAGCGCCTGGATTCTGGCAAGGACAAGATGCTGACCCCTGAGGCAGTGGTGAATGGCGAGCTGCTGCCAG GCTGCCCTGCCTCCGAAGCACACATGTGACGTGCCAAGTGCACAGTTGCCACCAGCATCCTCCACAGCCCAAGCACAGG CCCTTTTCTAGCCAGACTGTAATTCTCAATGATTTCAGATGCACTATATTTGTAAAGGACAAGAAATAGTTCTTCTAGT TGAAGGCTTTTAACTAGCAGAAACACTTCTTCTTGGGACAGTATCAATTTTCAAGCCGCCTTTTCTTTTCCTCTAACCA TTTTTCTAAGGAGAACTCTCATCAGGATTCAAACTTGATTATCTCCCCAGTTTTCTATACGTCACAACAGAGGTTTACA GATAATAAATGTATTTTTAAAGGAGGTAATAGGCGGAGCTTATTGCCCCTTCCAGATTCCCCGTCCCCTCTGGTGTGCC ATGTCTGGGCAGCACAGTCCCTTCTGCAGGGGAAGCAGCTTC
Citation	Kimura W, Alev C, Sheng G, Jakt M, Yasugi S, Fukuda K. Identification of region-specific genes in the early chicken endoderm. Gene Expr Patterns. 2011 Mar-Apr;11(3-4):171-80. Epub 2010 Nov 23.
Copyright	Copyright © 2010 Elsevier B.V. All rights reserved.
Comments	the following primers given in the paper: MCT8: F, 5′-AACTCTTTTGGGTGCTTTCT-3′, R, 5′-TGTGAGAGTTCAGCTTTACC-3′. As these could not be located in the NCBI SLC16A2 gene, the complete SLC16A2 sequence is shown: Acc# XM_426274.3.

Stage

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Comments (click to highlight)

7-10

stage 8

stage 10

Gut
Neural Plate/Tube
Notochord
Somites
Surface Ectoderm
Ubiquitous

Entry 2

GEISHA Id	MCT8.Vancamp.2019	Data Source	Publication
Complete cDNA Template Probe	show GCGGGCATGTGGGACCGGCTGCGGGGCAGTCGGGCGGCGGGCGGCGGCCGGAGCGCGGCCGCGATGGCGCAGCGCGGGG AGGAGGGCGGCGAGCGGGGGCCGGCGGAGGAGGGCGGGGAGGGAGAGCCCCGGGCCGGGGCCGAGCGGGGGCCGAGCGG GGCCGCCGCGCCCTTCCAGCCTCCCGAGGGCGGCTTCGGCTGGGTCGTGGTCTTCGCCGCCGCCTGGTGCAATGGCTCC ATCTTCGGCATCCACAACTCCTTCGGGATCATCTACACCATGTTGCAGAGCGACCTGGGCGAGGACGAGAAGGACCCCA CGCTGGAGTTTAAAACAGCATGGGTTGGCTCTTTGGCCATGGGCATGATTTTCTTCTGCTCTCCCATCGTGAGCATCTT CACTGACCGCATCGGCTGCAGGACCACAGCAGCCTTGGGAGCTGCCATCGCTTTCATCGGGCTCCTCTCCAGCTCCTTC ACCAAGTCTCTGGAAGTTCGCTATTTCACGTATGGCATCCTCTTTGGCTGTGGCAGCTCCTTTGCCTTTCAGCCCTCGC TGGTCATCCTTGGTCACTACTTCAAGCGTCGCCTTGGCCTGGCCAATGGCATCGTGGCTGGCAGCAGCTGCCTCATCTC TGTGCCGCTGCCCTTCTTCCTGAAGATGGTGGGAAAGGCCATCGGGCTGGCACACACATTCCAAGTGCTCAGTGCCTTA ATGCTCATCCAGATCTTCTTGTCGATGACATATCGGCCCCTCCTGCCACCCTCCTGTGACTCTCAGCACGATGGGCAGG ACAAACTGGGCAGCCGGAGTGTGCGGCAGCAGTGCTGGGCCCAGATGCGCAAGTATTTCAACTTGAGGGTTTTCCGGAG AAAGACCTACCGAATTTGGGCCTTTGGGATTGCTACAGCTGTCCTGGGGTATTTTGTACCATACATGCACCTGGTGAAA TATGTGGAGAAGGAATTTGGAGAAACCAAAAACGACTGGATTCTCCCAGTCTGTCTTGGAGGCATGTCTGGGCTGGGGC GCTTGATTTCGGGCCGCACTGGGGACTGCATTCCTGGGCTGAAGAAGATTTATCTGCAGGTCGCGTCCTTTGTTCTGTT CGGCATCATGTGCATGATGATCCCGCAGTGCCGAGGGTTTGAGGGCGTCATCGTCATCTGCCTCTTCCTCGGCCTTTGC GATGGCTGCTTCACCACCATTATGGCCCCCGTTGCCTTTGAGCTGGTGGGGCCTATGCAAGCATCCCAGGCCATAGGGT ACCTGATGGGGCTGATGGCTGTGCCCATGACTGCGGGCACGCCAATTGCAGGATACTTCAACGATTATTTTCAGAATTA CCATGCGGGTTTTTACTTCGCCGGAGTGCCTCCCATCATCGGCGGCTTGGTGCTCTCCGTCGTCCCGCTGGTGCACCAG AGGATGCTGCAGAAGCAGCGCCTGGATTCTGGCAAGGACAAGATGCTGACCCCTGAGGCAGTGGTGAATGGCGAGCTGC TGCCAGGCTGCCCTGCCTCCGAAGCACACATGTGACGTGCCAAGTGCA
Citation	Pieter Vancamp, Nele M A Bourgeois, Anne M Houbrechts, Veerle M Darras. Knockdown of the thyroid hormone transporter MCT8 in chicken retinal precursor cells hampers early retinal development and results in a shift towards more UV/blue cones at the expense of green/red cones. Exp Eye Res. 2019 Jan;178:135-147. Epub 2018 Sep 28.. DOI: 10.1016/j.exer.2018.09.018.
Copyright	Copyright © 2018 Elsevier Ltd. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_001321737.1).