GEISHA - A Chicken Embryo Gene Expression Database
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CAPN9
calpain 9

Gene
Official SymbolCAPN9
Official Full Namecalpain 9
CGNC ID8457
also known ascalpain-9
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
Sequence Information
Genomic
RNAXM_419585
PolypeptideXP_419585
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly37232, 39165FBgn0012051, FBgn0025866
Human10753ENSG00000135773MIM:606401
Mouse73647ENSMUSG00000031981All phenotypic alleles (2):Targeted, knock-out(1) Targeted, other(1) MGI:1920897
Xenopus100158582, 444426948344
Zebrafish445107ENSDARG00000012341ZDB-GENE-010724-2ZFIN:ZDB-GENE-010724-2
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene421544
Ensembl GeneENSGALG00000011136
KEGGgga:421544
GEISHA IdCAPN9Data SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTATGGATACCAGTGGCAACGG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGTCGGTTTCAGTCTGCTTGAGAGGCcDNA Template Length637
Complete cDNA Template Probeshow
TTATGGATACCAGTGGCAACGGGAAACTGGAATTCAGTGAGTTCAAAGTTTTCTGGGAAAAACTGAAGAAATGGATAAA
TATCTTTCTTCGATTTGACTTTGACAAATCTGGCTCCATGTCCTCCTATGAGCTTCGCAGTGCTCTCAAAGCTGCAGGA
TACCAACTCAACAACTACCTGCTGCAGCTGATCGTCCTCCGATACTCTGATGAGCAGTTCCAAATTGATTTTGATGATT
TTCTAAACTGCCTAATTCGCTTGGAGAATGCAAGTCGAGTATTCCAAGCATTGAGTGTGAAAAACAAGGATTTCATTAA
CTTGAATATTGGCGAGTTCATCAACCTGGCAATGAACATCTGAGGAAGTCGGATTTGGATGCCAGGAGTCTCTTGTGCC
ATCGCTGCCATGACTTCTGCCCCAACAGCTGTGATGCCCTTCTCATGCAGACTTCATCAGGAGCTTTTGTGTGGAGGAA
GACTCATGCTGCTCGTCTTTCTGGTCTCCAGCCCTGTTGCATTCAGGAGTTCAACAGTCAGATCTCATTTTGTTTTTAA
TTTCGATAAAAGCTATTGATGGATTTGTTACTGGGAGAGATATTTGGATGGGGCATACATGCCTCTCAAGCAGACTGAA
ACCGA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 13
stage 14
stage 16
Head Mesenchyme
Unlabeled
 
19-24
stage 21
Foregut
Head Mesenchyme
Mesonephros
Sclerotome
 
25-26
stage 26
stage 26
stage 26
stage 26
stage 26
Foregut
Gut
Head Mesenchyme
Lateral Plate Mesoderm
Lung
Mesonephros
Pharyngeal Arches and Clefts
Sclerotome
 

Mouse

EmageMGI:1920897
MGI GXDMGI:1920897

Frog

Xenbase948344

Fruit Fly

BDGPFBgn0012051, FBgn0025866

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-010724-2
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