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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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CELF4
CUGBP Elav-like family member 4

Gene

Official Symbol	CELF4
Official Full Name	CUGBP Elav-like family member 4
CGNC ID	52922
also known as	BRUNOL4, CUGBP Elav-like family member 4\|CUG-BP and ETR-3-like factor 4, CUG-BP and ETR-3-like factor 4 isoform 2 , BRUNOL4, CELF4
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC

Sequence Information

Genomic
RNA	XM_001231324
Polypeptide	XP_001231325

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	39527			FBgn0264001
Human	56853	ENSG00000101489		MIM:612679
Mouse	108013	ENSMUSG00000024268	All phenotypic alleles (3):Targeted, other(2) Transgenic(1)	MGI:1932407
Xenopus	779831, 100190784			5873698
Zebrafish	436835	ENSDARG00000070045	ZDB-GENE-040718-300	ZFIN:ZDB-GENE-040718-300

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	426889
Ensembl Gene
KEGG	gga:426889

Entry 1

GEISHA Id	CELF4.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	5’-CGGGACAAATGGGCATGTTC-3’
Reverse cDNA Template Primer	5’-AATTAACCCTCACTAAAGGTCCTTTGGCCTCTTCAGCTG-3’	cDNA Template Length	766
Complete cDNA Template Probe	show CGGGACAAATGGGCATGTTCAACCCCATGGCCATCCAGTTTGGAGCATATGGCGCCTACGCACAGGCACTGATGCAGCA GCAAGCCGCGATCATGGCTTCGGTGGCGCAGGGCGGATACCTGAACCCCATGGCAGCCTTTGCTGCAGCCCAGATGCAG CAGATGGCGGCTCTGAACATGAATGGCCTGGCAGCTGCCCCCATGACTCCAACCTCAGGTGGAAGCACGCCTCCTGGCA TAACTGCACCAGCTGTGCCTAGCATCCCATCTCCAATTGGGGTGAATGGTTTCACTGGCCTCCCGCCGCAGGCTAACGG GCAGCCCGCCGCAGAAGCCGTGTTTGCTAATGGCATACACCCTTACCCAGCACAGAGCCCCACTGCAGCAGACCCCTTG CAGCAAGCCTACGCTGGAGTGCAGCAGTACGCAGGTCCTGCTTATCCTGCTGCTTATGGCCAGATTAGCCAAGCGTTCC CACAGCCACCTCCCATGATACCACAGCAACAGAGAGAAGGACCAGAGGGCTGTAACCTGTTTATCTACCATCTGCCCCA GGAGTTTGGGGATGCTGAGCTGATGCAGATGTTCCTGCCTTTCGGTAATGTCATCTCCTCGAAAGTGTTTGTGGATCGG GCGACAAACCAAAGTAAATGCTTTGGTTTTGTGAGTTTTGACAATCCTGCCAGTGCCCAAGCTGCCATCCAAGCTATGA ATGGCTTCCAGATTGGCATGAAGAGGCTGAAGGTGCAGCTGAAGAGGCCAAAGGA

Stage

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Comments (click to highlight)

7-12

stage 11

Unlabeled

13-18

stage 17

stage 18

Head Mesenchyme
Neural Plate/Tube
Pharyngeal Arches and Clefts
Unlabeled

19-24

stage 24

Foregut
Head Mesenchyme
Leg Mesenchyme
Myotome
Neural Plate/Tube
Pharyngeal Arches and Clefts
Spinal Ganglia and Nerves
Wing Mesenchyme

25-27

stage 25

stage 27

Duodenum
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Midbrain
Myotome
Pharyngeal Arches and Clefts
Spinal Cord
Spinal Ganglia and Nerves
Wing Mesenchyme

Entry 2

GEISHA Id	CELF4.Brimacombe.2007	Data Source	Publication
Complete cDNA Template Probe	show ATGGCGCGCCCGATTCAGGTGAAACCAGCGGACAGCGAAAGCCGAGGAGAAGACAGAAAACTCTTCGTGGGCATGCTTA ATAAGCAGCAGTCAGAAGATGATGTGCGCAGGCTATTCGAGGCATTTGGCAACATTGAGGAGTGCACAATCCTTCGGGG ACCCGATGGAAACAGCAAAGGCTGTGCATTTGTGAAATACTCTTCGCATGCAGAGGCCCAAGCAGCTATCAATGCCTTG CATGGCAGCCAGACAATGCCGGGAGCCTCTTCAAGCCTGGTGGTGAAGTTTGCAGATACAGACAAGGAGCGTACAATGA GGCGCATGCAGCAAATGGCGGGACAAATGGGCATGTTCAACCCCATGGCCATCCAGTTTGGAGCATATGGCGCCTACGC ACAGGCAATGCAGCAGCAAGCCGCGATCATGGCTTCGGTGGCGCAGGGCGGATACCTGAACCCCATGGCAGCCTTTGCT GCAGCCCAGATGCAGCAGATGGCGGCTCTGAACATGAATGGCCTGGCAGCTGCCCCCATGACTCCAACCTCAGGTGGAA GCACGCCTCCTGGCATAACTGCACCAGCTGTGCCTAGCATCCCATCTCCAATTGGGGTGAATGGTTTCACTGGCCTCCC GCCGCAGGCTAACGGGCAGCCCGCCGCAGAAGCCGTGTTTGCTAATGGCATACACCCTTACCCAGCACAGAGCCCCACT GCAGCAGACCCCTTGCAGCAAGCCTACGCTGGAGTGCAGCAGTACGCAGGTCCTGCTTATCCTGCTGCTTATGGCCAGA TTAGCCAAGCGTTCCCACAGCCACCTCCCATGATACCACAGCAACAGAGAGAAGGACCAGAGGGCTGTAACCTGTTTAT CTACCATCTGCCCCAGGAGTTTGGGGATGCTGAGCTGATGCAGATGTTCCTGCCTTTCGGTAATGTCATCTCCTCGAAA GTGTTTGTGGATCGGGCGACAAACCAAAGTAAATGCTTTGGTTTTGTGAGTTTTGACAATCCTGCCAGTGCCCAAGCTG CCATCCAAGCTATGAATGGCTTCCAGATTGGCATGAAGAGGCTGAAGGTGCAGCTGAAGAGGCCAAAGGATGCCAACCA TCCCTACTGA
Citation	Brimacombe KR, Ladd AN. Cloning and embryonic expression patterns of the chicken CELF family. Dev Dyn. 2007 Aug;236(8):2216-24.
Copyright	Copyright © 2007 Wiley-Liss, Inc.
Comments	The paper gives two accession numbers (EF520344 and EF520345)and we have selected the longer (EF520345).