GEISHA - A Chicken Embryo Gene Expression Database
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CCDC88A
coiled-coil domain containing 88A

Gene
Official SymbolCCDC88A
Official Full Namecoiled-coil domain containing 88A
CGNC ID6139
also known asgirdin
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNAXM_419285
PolypeptideXP_419285
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human55704ENSG00000115355MIM:609736
Mouse108686ENSMUSG00000032740All phenotypic alleles (3):Targeted, other(3) MGI:1925177
Xenopus100380128, 4319735883976
Zebrafish100498671ZDB-GENE-100701-2, ZDB-GENE-100701-3ZFIN:ZDB-GENE-100701-2, ZFIN:ZDB-GENE-100701-3
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene421210
Ensembl GeneENSGALG00000008104
KEGGgga:421210
GEISHA IdCCDC88A.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5'-GGAATAATGCTACACTTCAAGCGG-3'
Reverse cDNA Template Primer5'-AATTAACCCTCACTAAAGGGAACTATCCTGACTGTCCTGGTG-3'cDNA Template Length1171
Complete cDNA Template Probeshow
GGAATAATGCTACACTTCAAGCGGAGAAGCAAGCACTGAAAACACAATTAAAGCAGCTGGAGACACAGAATAACAATCT
GCAAGCTCAGATTCTTGCACTTCAGAGACAGACCGTTTCTCTACAGGAGCAGAACACAACTCTGCAGACTCAAAATGCC
AAACTTCAGGTTGAAAATTCTACCCTTAATTCTCAAAGTACATCTCTAATGAATCAGAATGCACAACTGTTGATTCAAC
AGTCTGCTTTAGAAAATGAGAAGGAAGGTGTGCTCAAGGAGCTTGAGGATCTGAAGTCATTGTATGATTCACTTCTGAA
AGACCACGAAAAACTGGAGCACCTCCATGAACGCCAGGCTTCTGAGTATGAGTCGCTGATTGCTAAACATGGAAGTCTT
AAATCTGCACACAAAAATCTGGAGGTGGAACATAAGGACTTGGAAGATAGGTACAGTCAGTTGCTTAAGCAGAAAGTGC
AGCTGGAAGAATTGGAGAAAGTGCTCAAAACAGAACAGGAGAAAATGCTGCAGCAAAATGAAAAACATGAGACTGTAGC
AGCAGAGTATAAGAAACTTCGTGATGAAAATGATAGGCTTGCTCATACACATGATCAACTCTTGAAAGAGAATGAAGTT
CTGCAAACTGATCATAAGAATTTGAAGACTTTGTTAAACAATTCCAAACTGGGACAAACACAATTAGAAGCTGAGTTCT
CTAAACTCAGAGAAGAGTACCAACTTCTGGATATTAAATGTACAAAAATAAGTAATCAGTGTGAGCTGCTTAGCCAGCT
TAAAGGAAATATGGAGGAGGAAAACAGACACCTGCTAGATCAAATTCAGACATTAATGCTACAGAATAGAACGTTACTT
GAGCAGAATATGGAAAGCAAGGATCTCTTCCATGTAGAGCAAAGACAGTACATCGACAAGCTAAATGAATTAAGGCGAC
AGAAGGAGAAATTGGAGGAGAAGATAATGGATCAGTATAAATTTTATGAGCCATCTCCACCTAGAAGAAGGGGCAACTG
GATTACACTGAAGATGAGGAAACTGATGAAATCCAAGAAGGATGTTAATCGAGAACGTCAGAAGTCTGCAAGCCTTACA
CCTACCCGTTCAGAATCCAGTGAAGGATTTCTTCAGCTGCCCCACCAGGACAGTCAGGATAGTTC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
Unlabeled
 
7-12
stage 8
stage 9
stage 11
Anterior Intestinal Portal
Head Mesenchyme
Lateral Plate Mesoderm
Neural Plate/Tube
Primitive Streak
Somites
 
13-18
stage 18
Widespread Expression
 
19-24
stage 20
stage 22
stage 23
stage 23
stage 23
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Lung
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Ganglia and Nerves
Widespread Expression
Wing Mesenchyme
 
25-26
stage 26
stage 26
stage 26
stage 26
Foregut
Heart
Leg Mesenchyme
Lung
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Cord
Spinal Ganglia and Nerves
Wing Mesenchyme
 

Mouse

EmageMGI:1925177
MGI GXDMGI:1925177

Frog

Xenbase5883976

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-100701-2, ZDB-GENE-100701-3
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