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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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PTH
parathyroid hormone

The human orthologue of this gene is associated
with the following human diseases:

Gene

Official Symbol	PTH
Official Full Name	parathyroid hormone
CGNC ID	3989
also known as	parathyroid hormone\|thyroid hormone
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC

Sequence Information

Genomic
RNA	NM_205452
Polypeptide	NP_990783

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	5741	ENSG00000152266	MIM:146200	MIM:168450
Mouse	19226	ENSMUSG00000059077	All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2)	MGI:97799
Xenopus	100487256, 100462909			1018316
Zebrafish	405886, 405885	ENSDARG00000093738, ENSDARG00000091961	ZDB-GENE-040623-1, ZDB-GENE-040623-2	ZFIN:ZDB-GENE-040623-1, ZFIN:ZDB-GENE-040623-2

Gene Ontology

Molecular Function	RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity, more...
Biological Process	negative regulation of transcription from RNA polymerase II promoter, more...
Cellular Component	extracellular region

Links to other databases

Entrez Gene	396436
Ensembl Gene	ENSGALG00000005358
KEGG	gga:396436

Entry 1

GEISHA Id	PTH.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	5’-TGCAGGAACAGTGAGAGCAG-3’
Reverse cDNA Template Primer	5’-AATTAACCCTCACTAAAGGTTCTACCTCCAGCGGATTGC-3’	cDNA Template Length	656
Complete cDNA Template Probe	show TGCAGGAACAGTGAGAGCAGAGATTGTAGCATATACGTATGCAAAGCCCTAACTATAGAATTGGGAAATGGTTCAACAC GAGATAGAAACAAGACTTGTTTCAATTGTTATCATCTCTCCTTCAGTCAATAATCTATGAGTTTCTGTATATTGTGCTT AGGCCACATGGGTAAGTGGCTCTCATAAAATTACTCATCTTCACATGTGCACTTATACAGAATTGGGATTTCAGTTTGT TAAAACCCTGAAATTACAACCATTAAAATATAGAAATCAAAACCGGGGAATCATCAGTTAAAATACAAGCAGGATTCAG AAAGAATTTGACAGGAACATGGATGGGAGAAAATGATGATAATAATATAGAAAAGAAAGCAGCAAATATAAAATGATTT TGAATTGTATAGACAAGTATGTGCTTATGACCTCGACCACTTCTGAATAATAAGAATATTTCCCCTGTAGAAGTGACAG CAGTTTCCTCCCAACGTTCCACTGTGAGAATTCAAACCTCGAGCAGAATTCCAGTTCTAAGCCAACACATCTGTGTGGT CCCATACCACTTCCTTGTTTGTTTGATGTCCAGCACATCTTGGGAACGTAATGAAAAACTCATACATAATTACAATTAT AAACGCAATCCGCTGGAGGTAGAA

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 12

Unlabeled

13-18

stage 17

Foregut
Head Mesenchyme
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Tail

19-24

stage 19

stage 21

stage 23

Forebrain
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Lung
Midbrain
Pharyngeal Arches and Clefts
Sclerotome
Wing Mesenchyme

25-26

stage 26

Head Mesenchyme
Mesonephros
Outflow Tract
Sclerotome
Spinal Cord
Spinal Ganglia and Nerves

Entry 2

GEISHA Id	PTH.Grevellec.2011	Data Source	Publication
Complete cDNA Template Probe	show GATTTAAGGGATCCACTAAACCAATTCAGTAGTCTTTAAATATACTTGACATCAAGACACAGCCATCTGCTGACATACC CCAACCAGAAAACTGTTAAGGACAATATCTGATAAAAATGACTTCTACAAAAAATCTGGCCAAGGCCATAGTGATTTTA TATGCTATATGTTTTTTTACAAACTCTGATGGAAGACCAATGATGAAGAGATCGGTGAGTGAGATGCAATTAATGCATA ACCTTGGAGAGCATCGACACACTGTGGAGAGACAGGACTGGCTTCAGATGAAACTGCAGGATGTGCACAGTGCCCTTGA GGATGCCAGGACCCAGAGGCCTCGAAACAAGGAGGATATTGTCCTGGGGGAGATAAGAAACCGGAGGCTGCTCCCTGAG CATTTGCGGGCAGCAGTGCAGAAGAAATCCATTGACCTGGACAAAGCTTACATGAATGTACTCTTTAAAACTAAGCCAT GATGAAAAGACCAAGAGCATTATAACTGTCCAAGTAAGCACATGTCTGTAGATCACTGACCAGTTAGGGCATTTTATTT ATTTTTTTTTTTTTAACTCAAACTATGATAAGGATTAAAGGCTCCATGCCAGACTGTAGCCCCACTGAGATGGGTATTT CACAGCTAAATAGTAAAGTGTATTTATAGGCCACCCATGGCCATTGCTGCTAACTCCCAGGTATCTTTTAAATGGCTAA TGTAACTCATTAACTTCCAGGAGAATTAAAAACAAATGGCAAAACAAAAAACAACAAAGACCACCTGCAATAGAATAAG AAAGTTGAAAAACATTTAAGACCAGTTCTACCACTCCTATATGGAGAGCATTTGTCTGTAATCTTTAGACCTACTAGTA CTGTAAACTAACAACGTAATATAGGCATAACTGCATTATGCCTAGGGTTAAACTTCAAGTTTGTCCTAATGAAAGGAAC GCAAACTTAAATCCACTCTTACTTTCCCAAGAAGGCCTAAAGCCAGACCAATGTCAGTAACATAGACAAAGCTGCATGA TAATAACTTAGGATTAAAGAGTGCGAACATGAAAAATAGAAGGAACCCAAAGCTTAAGATTAAAGTAGAATGAAATAAA TTGTGCATGAAAAAGAAGAACGAAGTTTTACAAGATACTGAAATGAAAGGGAGGTTTATTAACTTTCCCTCTTAATTAT GAGCTGTCACCTTTTGGAACTGCAGGAACAGTGAGAGCAGAGATTGTAGCATATACGTATGCAAAGCCCTAACTATAGA ATTGGGAAATGGTTCAACACGAGATAGAAACAAGACTTGTTTCAATTGTTATCATCTCTCCTTCAGTCAATAATCTATG AGTTTCTGTATATTGTGCTTAGGCCACATGGGTAAGTGGCTCTCATAAAATTACTCATCTTCACATGTGCACTTATACA GAATTGGGATTTCAGTTTGTTAAAACCCTGAAATTACAACCATTAAAATATAGAAATCAAAACCGGGGAATCATCAGTT AAAATACAAGCAGGATTCAGAAAGAATTTGACAGGAACATGGATGGGAGAAAATGATGATAATAATATAGAAAAGAAAG CAGCAAATATAAAATGATTTTGAATTGTATAGACAAGTATGTGCTTATGACCTCGACCACTTCTGAATAATAAGAATAT TTCCCCTGTAGAAGTGACAGCAGTTTCCTCCCAACGTTCCACTGTGAGAATTCAAACCTCGAGCAGAATTCCAGTTCTA AGCCAACACATCTGTGTGGTCCCATACCACTTCCTTGTTTGTTTGATGTCCAGCACATCTTGGGAACGTAATGAAAAAC TCATACATAATTACAATTATAAACGCAATCCGCTGGAGGTAGAAAGGTTACTTGTAACTAATGGACTGTAGTACACAAT CTAGGCTATACTTTCACTAATGTAAAGGCTCTGATGCTGCAAGCAGATGATATACCAGTGCAAATGAGTGCATTGCACA CACAGGCAAGGATTCCATGCCTCTTGCCTATTTGTAGAATCAAGGCCTTAAGGTGCACTTTCTATTTATTCATGTATCA GACATCTGTGCTAACTTAAAATTGTATTTTGTACCTACGTCTCACATATGTATTACAAAATAAAGTGGACCAAAAGCTC TTGGACATTATTTTAAAGCAT
Citation	Grevellec A, Graham A, Tucker AS. Shh signalling restricts the expression of Gcm2 and controls the position of the developing parathyroids. Dev Biol. 2011 May 15;353(2):194-205. Epub 2011 Feb 22.
Copyright	Copyright © 2011 Elsevier Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_205452.2).

Stage

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Location (click to highlight)

Comments (click to highlight)

25-27

stage 27

Pharyngeal Arches and Clefts
Unlabeled

all

Entry 3

GEISHA Id	PTH.Okabe.2004	Data Source	Publication
Complete cDNA Template Probe	show GATTTAAGGGATCCACTAAACCAATTCAGTAGTCTTTAAATATACTTGACATCAAGACACAGCCATCTGCTGACATACC CCAACCAGAAAACTGTTAAGGACAATATCTGATAAAAATGACTTCTACAAAAAATCTGGCCAAGGCCATAGTGATTTTA TATGCTATATGTTTTTTTACAAACTCTGATGGAAGACCAATGATGAAGAGATCGGTGAGTGAGATGCAATTAATGCATA ACCTTGGAGAGCATCGACACACTGTGGAGAGACAGGACTGGCTTCAGATGAAACTGCAGGATGTGCACAGTGCCCTTGA GGATGCCAGGACCCAGAGGCCTCGAAACAAGGAGGATATTGTCCTGGGGGAGATAAGAAACCGGAGGCTGCTCCCTGAG CATTTGCGGGCAGCAGTGCAGAAGAAATCCATTGACCTGGACAAAGCTTACATGAATGTACTCTTTAAAACTAAGCCAT GATGAAAAGACCAAGAGCATTATAACTGTCCAAGTAAGCACATGTCTGTAGATCACTGACCAGTTAGGGCATTTTATTT ATTTTTTTTTTTTTAACTCAAACTATGATAAGGATTAAAGGCTCCATGCCAGACTGTAGCCCCACTGAGATGGGTATTT CACAGCTAAATAGTAAAGTGTATTTATAGGCCACCCATGGCCATTGCTGCTAACTCCCAGGTATCTTTTAAATGGCTAA TGTAACTCATTAACTTCCAGGAGAATTAAAAACAAATGGCAAAACAAAAAACAACAAAGACCACCTGCAATAGAATAAG AAAGTTGAAAAACATTTAAGACCAGTTCTACCACTCCTATATGGAGAGCATTTGTCTGTAATCTTTAGACCTACTAGTA CTGTAAACTAACAACGTAATATAGGCATAACTGCATTATGCCTAGGGTTAAACTTCAAGTTTGTCCTAATGAAAGGAAC GCAAACTTAAATCCACTCTTACTTTCCCAAGAAGGCCTAAAGCCAGACCAATGTCAGTAACATAGACAAAGCTGCATGA TAATAACTTAGGATTAAAGAGTGCGAACATGAAAAATAGAAGGAACCCAAAGCTTAAGATTAAAGTAGAATGAAATAAA TTGTGCATGAAAAAGAAGAACGAAGTTTTACAAGATACTGAAATGAAAGGGAGGTTTATTAACTTTCCCTCTTAATTAT GAGCTGTCACCTTTTGGAACTGCAGGAACAGTGAGAGCAGAGATTGTAGCATATACGTATGCAAAGCCCTAACTATAGA ATTGGGAAATGGTTCAACACGAGATAGAAACAAGACTTGTTTCAATTGTTATCATCTCTCCTTCAGTCAATAATCTATG AGTTTCTGTATATTGTGCTTAGGCCACATGGGTAAGTGGCTCTCATAAAATTACTCATCTTCACATGTGCACTTATACA GAATTGGGATTTCAGTTTGTTAAAACCCTGAAATTACAACCATTAAAATATAGAAATCAAAACCGGGGAATCATCAGTT AAAATACAAGCAGGATTCAGAAAGAATTTGACAGGAACATGGATGGGAGAAAATGATGATAATAATATAGAAAAGAAAG CAGCAAATATAAAATGATTTTGAATTGTATAGACAAGTATGTGCTTATGACCTCGACCACTTCTGAATAATAAGAATAT TTCCCCTGTAGAAGTGACAGCAGTTTCCTCCCAACGTTCCACTGTGAGAATTCAAACCTCGAGCAGAATTCCAGTTCTA AGCCAACACATCTGTGTGGTCCCATACCACTTCCTTGTTTGTTTGATGTCCAGCACATCTTGGGAACGTAATGAAAAAC TCATACATAATTACAATTATAAACGCAATCCGCTGGAGGTAGAAAGGTTACTTGTAACTAATGGACTGTAGTACACAAT CTAGGCTATACTTTCACTAATGTAAAGGCTCTGATGCTGCAAGCAGATGATATACCAGTGCAAATGAGTGCATTGCACA CACAGGCAAGGATTCCATGCCTCTTGCCTATTTGTAGAATCAAGGCCTTAAGGTGCACTTTCTATTTATTCATGTATCA GACATCTGTGCTAACTTAAAATTGTATTTTGTACCTACGTCTCACATATGTATTACAAAATAAAGTGGACCAAAAGCTC TTGGACATTATTTTAAAGCAT
Citation	Okabe M, Graham A.. The origin of the parathyroid gland. Proc Natl Acad Sci U S A. 2004 December 21; 101(51): 1771617719.
Copyright	Copyright © 2004, The National Academy of Sciences
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_205452.2 ).