GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

MYL12A
myosin, light chain 12A, regulatory, non-sarcomeric

Gene
Official SymbolMYL12A
Official Full Namemyosin, light chain 12A, regulatory, non-sarcomeric
CGNC ID49735
also known asG1, MLC-2, MRCL3, myosin regulatory light chain 2, smooth muscle minor isoform|isoform L20-B|isoform L20-B1|myosin regulatory light chain MRCL3|myosin regulatory light chain, isoform L20-B|smooth muscle minor isoform, Myosin regulatory light chain 2, smooth muscle minor isoform, MLC-2, Isoform L20-B1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_205341
PolypeptideNP_990672
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly31554FBgn0003514
Human10627ENSG00000101608
Mouse
Xenopus
Zebrafish337084ENSDARG00000025326ZDB-GENE-030131-9028ZFIN:ZDB-GENE-030131-9028
Gene Ontology
Molecular Functioncalcium ion binding
Biological Process
Cellular Componentmyosin complex
Links to other databases
Entrez Gene396284
Ensembl GeneENSGALG00000014854
KEGGgga:396284

Entry 1

GEISHA IdJ31Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GGGCTGCTGCCTCTTCCTTCGCTCGCCGTCACACCGAGGCGCCGCCGCAGCCGCTGGGGGCTTGAGACCGGAGTTCCAT
TCTTGTAGACAGATCTATTAAGAAGGGAACCCAGACAAAAGCTGCTCCTTCTCAGAGTGAAAGTATCCAAAAATCAACA
TGTCTAGCAAAAAAGCAAAGACGAAGACCACCAAGAAGCGCCCTCAGCGCGCCACGTCCAATGTATTTGCCATGTTTGA
TCAGTCCCAGATCCAGGAATTCAAGGAGGCCTTCAACATGATTGATCAGAACAGGGATGGCTTCATTGACAAGGAGGAC
TTGCACGACATGCTTGCCTCCCTCGGGAAGAACCCAACAGATGAATACCTGGATGCCATGATGAACGAGGCTCCAGGCC
CCATCAACTTCACAATGTTCCTCACAATGTTTGGTGAGAAGCTCAATGGCACTGATCCTGAAGATGTCATCAGGAATGC
TTTTGCTTGCTTTGACGAAGAAGCAACAGGGTTTATTCAAGAAGACTACCTGCGGGAGCTGCTGACCACGATGGGAGAC
AGGTTCACAGATGAAGAGGTAGATGAGCTCTACAGAGAGGCACCAATCGACAAAAAGGGCAATTTCAACTACATTGAAT
TCACGCGCATCCTTAAACATGGAGCAAAAGACAAGGATGACTGAGCAAATCCCTGGACACCTACCTGCAGATTTTCTTT
TTGCTTTTTTTTTTTTCCCCCCTCAGGACCTGTTTTTTTCTTTTCTCTCATTGAGACCCTTTGCATACATTTCTGGCAC
TTCAGCTTTTGCCTCTGTAGACTCTGGGGCTGCTCAGGCACACCTGCAATTTTGCA
Reverse cDNA Template Probeshow
GGAATCCTGTGCTTTCTGTAAAATAAAAAGGAGTCTGTGTATGAGCAGAGTGTTTGAGTGATGCCTCTTACCACACCCA
CAGGGCGCCAACAGTATAGAATCCATTATATTTCGTTGCAGCCATTTTTGTTTCGGTTTCTTCCTTCTATCTTTTCTCA
AGTAGGGGTGGAGGAAGAAGAAACACGGGTGCTGCTTCTGTGCTTTTTATACATTATTCTCGCATTCCAAATGAAACAA
GGTACATATTTTTATGGCTTCTTCTGACTATAGTGCTTTAAGTGTGTGAAGAGGAAAGGCATTATTTTCTGTTCCACTT
CTTATATCCTATAGTTCATAGCAGAGGCTTAGCACAACACTCTGAAGCAGCTTTGCCATAATCTAAGAATTGTGGTTGG
CTGGATTCTTTTAGTCTTGAGAGAAATCGTGCCCAAAGTGATCACATGACGGAGTGCTGTTACTTATAGGAATTTGGTT
GTTACCCCTTTTGAATTTAGGTTGGACAAAATCAAGAAGTATCACTTGGCTGGGAGTGTTTTGCTGTTCCTTCGTGGAG
GCTGCTGTTGTAAACTGAATTTCATGAGAAGGCAATGAGTGGGTTAGAGGAATACGCTGTACTTCCACAAATAACCTGC
CAGAACCATCTTCACCTTTCAGGGCTTATCCTGGTGAAATTATGAATGTAAAAGACAGGATGGAAATGATGTTGGCCCA
TAGCGTGTTTGATTCATTATGGCTTATTAAAGATATTTACTAGTCCGGTGTTCCTCATACAATTCCAGCACAGCTAAGT
GCACAGTTAAGGAAAAGTCGGTGTCGGTGTTATAAAGCCATGTGAAAATGTGGGTGCTTATACATGTAATTGGTTATTG
GAATAAATACATCTTGAACTAGTAAAAAAAAAAAAAAAAAAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 4
stage 6
stage 6
Area Pellucida
Head Process
Hensen's Node
Notochord
 
7-11
stage 7
stage 7
stage 10
stage 11
stage 11
stage 11
stage 11
stage 11
Anterior Intestinal Portal
Ear/Otic Placcode
Forebrain
Head Mesenchyme
Head Process
Notochord
Primitive Streak
 

Entry 2

GEISHA IdH36Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GAGTGCTGCAGCTGCCGCTTCGCATCGCCACGCTCTGACCCGGTCCTGCTGCTGCCGCCAGAGCCAACAGCCAACATGT
CTAGCAAAAGGGCAAAGACGAAGACCACCAAGAAGCGCCCTCAGCGCGCCACGTCCAATGTATTTGCCATGTTTGATCA
GTCCCAGATCCAGGAATTCAAGGAGGCCTTCAACATGATTGATCAGAACAGGGATGGCTTCATTGACAAGGAGGACTTG
CACGACATGCTTGCCTCCCTCGGGAAGAACCCAACGGATGAATACCTGGATGCCATGATGAACGAGGCTCCAGGGCCCA
TCAACTTCACAATGTTCCTCACAATGTTTGGTGAGAAACTCAATGGCACTGATCCGGAAGATGTCATCAGGAATGCTTT
TGCTTGCTTTGACGAAGAAGCAACAGGGTTTATTCAAGAAGACTACCTGCGGGAGCTGCTGACCACGATGGGAGACAGG
TTCACAGATGAAGAGGTAGATGAGCTCTACAGAGAGGCACCAATCGACAAAAAGGGCAATTTCAACTACATTGAATTCA
CGCGCATCCTTAAACATGGAGCAAAAGACAAGGATGACTGAGCAAATCCCTGGACACCTACCTGCAGATTTTCTCTACT
TTACACTCATGTTTATTTTTGAGGGGGTTTTCCTGGTAGAACTTGTTGCATGCATTTAGCTTTACAACTTTTGCCTTTC
TTAATGTATTTATCTATTCCGGACCATTTAGGCACAACTGCACCTGTGTAATCAGACTGGAAGTTGGGAAAATACTGTA
AGGAGAAGGAGATAGGGACAAAGATAAGTGAACTTTGAAGTCCAAGAAAATAATCTCAGTGTTTCTGGTTTGGCTGGAT
TTTTACATTTTTTGTAATAAATGGCATTTTGAAATAAAGATTGCTATATAGATAAAAAAAAAAAAAAAAA
Commentsno specific expression detected
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
Area Pellucida
 
7-10
stage 8
stage 10
Anterior Intestinal Portal
Neural Plate/Tube
Primitive Streak
 

Entry 3

GEISHA IdMRLC.Bell.2004Data SourcePublication
Forward cDNA Template Probeshow
GGGCTGCTGCCTCTTCCTTCGCTCGCCGTCACACCGAGGCGCCGCCGCAGCCGCTGGGGGCTTGAGACCGGAGTTCCAT
TCTTGTAGACAGATCTATTAAGAAGGGAACCCAGACAAAAGCTGCTCCTTCTCAGAGTGAAAGTATCCAAAAATCAACA
TGTCTAGCAAAAAAGCAAAGACGAAGACCACCAAGAAGCGCCCTCAGCGCGCCACGTCCAATGTATTTGCCATGTTTGA
TCAGTCCCAGATCCAGGAATTCAAGGAGGCCTTCAACATGATTGATCAGAACAGGGATGGCTTCATTGACAAGGAGGAC
TTGCACGACATGCTTGCCTCCCTCGGGAAGAACCCAACAGATGAATACCTGGATGCCATGATGAACGAGGCTCCAGGCC
CCATCAACTTCACAATGTTCCTCACAATGTTTGGTGAGAAGCTCAATGGCACTGATCCTGAAGATGTCATCAGGAATGC
TTTTGCTTGCTTTGACGAAGAAGCAACAGGGTTTATTCAAGAAGACTACCTGCGGGAGCTGCTGACCACGATGGGAGAC
AGGTTCACAGATGAAGAGGTAGATGAGCTCTACAGAGAGGCACCAATCGACAAAAAGGGCAATTTCAACTACATTGAAT
TCACGCGCATCCTTAAACATGGAGCAAAAGACAAGGATGACTGAGCAAATCCCTGGACACCTACCTGCAGATTTTCTTT
TTGCTTTTTTTTTTTTCCCCCCTCAGGACCTGTTTTTTTCTTTTCTCTCATTGAGACCCTTTGCATACATTTCTGGCAC
TTCAGCTTTTGCCTCTGTAGACTCTGGGGCTGCTCAGGCACACCTGCAATTTTGCA
Reverse cDNA Template Probeshow
GGAATCCTGTGCTTTCTGTAAAATAAAAAGGAGTCTGTGTATGAGCAGAGTGTTTGAGTGATGCCTCTTACCACACCCA
CAGGGCGCCAACAGTATAGAATCCATTATATTTCGTTGCAGCCATTTTTGTTTCGGTTTCTTCCTTCTATCTTTTCTCA
AGTAGGGGTGGAGGAAGAAGAAACACGGGTGCTGCTTCTGTGCTTTTTATACATTATTCTCGCATTCCAAATGAAACAA
GGTACATATTTTTATGGCTTCTTCTGACTATAGTGCTTTAAGTGTGTGAAGAGGAAAGGCATTATTTTCTGTTCCACTT
CTTATATCCTATAGTTCATAGCAGAGGCTTAGCACAACACTCTGAAGCAGCTTTGCCATAATCTAAGAATTGTGGTTGG
CTGGATTCTTTTAGTCTTGAGAGAAATCGTGCCCAAAGTGATCACATGACGGAGTGCTGTTACTTATAGGAATTTGGTT
GTTACCCCTTTTGAATTTAGGTTGGACAAAATCAAGAAGTATCACTTGGCTGGGAGTGTTTTGCTGTTCCTTCGTGGAG
GCTGCTGTTGTAAACTGAATTTCATGAGAAGGCAATGAGTGGGTTAGAGGAATACGCTGTACTTCCACAAATAACCTGC
CAGAACCATCTTCACCTTTCAGGGCTTATCCTGGTGAAATTATGAATGTAAAAGACAGGATGGAAATGATGTTGGCCCA
TAGCGTGTTTGATTCATTATGGCTTATTAAAGATATTTACTAGTCCGGTGTTCCTCATACAATTCCAGCACAGCTAAGT
GCACAGTTAAGGAAAAGTCGGTGTCGGTGTTATAAAGCCATGTGAAAATGTGGGTGCTTATACATGTAATTGGTTATTG
GAATAAATACATCTTGAACTAGTAAAAAAAAAAAAAAAAAAAAA
CitationBell GW, Yatskievych TA, Antin PB. GEISHA, a whole-mount in situ hybridization gene expression screen in chicken embryos. Dev Dyn. 2004 Mar;229(3):677-87.
CopyrightCopyright © 2004 Wiley-Liss, Inc.
CommentsThe probe sequence below was obtained from the GEISHA database using information provided in the publication, Geisha J31.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 1
  
4
stage 4
Early Mesoderm
Extraembryonic Mesoderm
Hensen's Node
Primitive Streak
 

Mouse

Emage
MGI GXD

Frog

Xenbase

Fruit Fly

BDGPFBgn0003514

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-9028
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona