GEISHA - A Chicken Embryo Gene Expression Database
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SOX21
SRY-box 21

Gene
Official SymbolSOX21
Official Full NameSRY-box 21
CGNC ID
also known asCH31, transcription factor SOX-21|SRY-related protein CH31|Transcription factor SOX-21
gene typeunknown
Genomic Map
 Ensembl ID not known
NCBI
Sequence Information
Genomic
RNA
Polypeptide
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene107051027
Ensembl Gene
KEGG
GEISHA IdSOX21.Uchikawa.2011Data SourcePublication
Complete cDNA Template Probeshow
GTGAGCGCGGCGCCCCGGGGCCCCCGCAGCGCCCGAGCCGCCGCCGCCGCCGCCGCCGGCCCCGCAGCGCGCTCCGCGG
GCGGCCATGGCTGCGGGCGGCCGCTGACCGCCGCCCCGTCGAGGACGAACCCTGGCCCGGCGGGCGGCGGCGCGGAGAG
AGGCTCCGAGGCGGGTACCGGCACCCGTCCCGCCCGCAGCGCCCCGCGCCCGGAGCCGCCGAGATTGACTGGGGCGGAG
CGGAGCGCGGCGCGGCCGCGGAGCCGGAGCCGGAGCCGGAGCCGGCCGAGGAGGAGGAGTGCGGGCGGCGGGACACCAT
GTCCAAGCCGGTGGACCACGTCAAGAGACCGATGAACGCTTTCATGGTGTGGTCGCGGGCGCAGCGGCGGAAGATGGCC
CAGGAGAACCCCAAGATGCACAACTCGGAGATCAGCAAGCGGCTGGGCGCCGAGTGGAAGCTGCTGAGCGAGGCGGAGA
AGCGGCCCTTCATCGACGAGGCCAAGCGGCTGCGGGCCATGCACATGAAGGAGCACCCCGACTACAAGTACCGGCCGCG
CCGCAAGCCCAAGACGCTGCTCAAGAAGGACAAGTTCGCCTTCCCCGTGCCCTACGGGCTGGGCGCCGTGGCCGAGCAC
GAGCCCCCGCACGGGCTGAAGGCGGCGGCGCTGCACGGCGGGGCTGCGGGCGGGCTGGGGCCCGACTCGCTGCTGGGCA
ACCCCGAGAAGGCGGCCGCCGCCGCCGCCGCCGCCGCCGCGCGCGTCTTCTTCCCGCAGTCGGCCGCCGCCGCGGCCGC
CGCCGCCGCCGCCGCCGCCGCGGGCGGCCCCTACTCGCTGCTGGACCTGGGCTCCAAGATGGCCGAGATCTCCTCGTCG
TCGTCGGCGGGCTCGGCGCTGCCCTACGCCTCCTCGCTGGGCTACCCCGGCGCCGGCGGGGCGGGAGCCTTCCACGGGG
CCGCCGCCGCCGCCGCCGCCGCGGCCGCCGCCGCCGGGGGGCACACGCACTCGCACCCGTCCCCCGGCAACCCGGGCTA
CATGATCCCCTGCAACTGCAGCGCCTGGCCCGGGCCCGGGCTGCAGCCTCCGCTGGCCTACATCCTCCTGCCGGGCATG
GGCAAGCCCCAGCTGGACCCGTACCCCGCGGCCTACGCCGCCGCGCTATGACCCGCGCTGTGAGCCGCTGCCCCGGGGG
GGGAGCGGGCGGGGAGCGGCGGGGCCGCCGCCGACCTGTTGCGCGCCGCCCCGCCTCGAGCTCGTGTGTGTGTTGCATG
CGGATAGCCGAGCTGAGAGGGAATGAGAAAAAGGGGAAGAAAAAAAAAAAAGACAAAAAAAAAAAAAAAAAAGACCAAA
ACAAAAAAAAAACCCCAACCTCCCCCCACCCCCCCTCCCCCCTTCCTTCCCCCTCCCGTCCGTCCCCTCGAAAAGTGCT
TCCTCGGGGACGTGGGCTCGGGAAGGGCCGCGCGGGGATGCGGCGTTCCCCCGGGACGGTTCCCTACGGGGGCAGCGGT
TGAGGCGGTGCCGCTCCGCTCCGGGGGTGTCAGCCCGGGACTGTACATGTGTCAATGTCTGTGGCAACGTTAGGTCTCG
GATCGGAAAGTCTGTCGCTTCCTTTGCCCACGGTCGAGTCGGTTTGAAGCTGAAGAAAAAGGGAAAGAAAAGAAAAAAA
AAAAAA
CitationUchikawa M,Yoshida M, Iwafuchi-Doi M, Matsuda K, Ishida Y, Takemoto T, Kondoh H. B1 and B2 Sox gene expression during neural plate development in chicken and mouse embryos: universal versus species-dependent features. Cell Growth Differ 2011 Aug;53(6):761-71.. null.
Copyright© 2011 Japanese Society of Developmental Biologists.
CommentsInsufficient information is provided in publication to verify exact sequence used to synthesize probe; the full length RNA sequence is shown (acc NM_001396674).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
Neural Plate/Tube
Prospective Neural Plate Ectoderm
7-12
stage 7
stage 8
stage 9
stage 9
stage 10
stage 11
stage 12
Ear/Otic Placode
Neural Plate/Tube
Posterior Neural Plate
13-18
stage 13
Diencephalon
Neural Plate/Tube
Rhombomeres
 
19-20
stage 20
stage 20
stage 20
  

Mouse

Emage
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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