GEISHA - A Chicken Embryo Gene Expression Database
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ATF2
activating transcription factor 2

Gene
Official SymbolATF2
Official Full Nameactivating transcription factor 2
CGNC ID7057
also known ascyclic AMP-dependent transcription factor ATF-2|cAMP-dependent transcription factor ATF-2, Cyclic AMP-dependent transcription factor ATF-2, Activating transcription factor 2
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_204904
PolypeptideNP_990235
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human1386ENSG00000115966MIM:123811
Mouse11909ENSMUSG00000027104All phenotypic alleles (7):Targeted, knock-out(4) Targeted, other(2) Transgenic(1) MGI:109349
Xenopus100485532, 378533961087
Zebrafish100006516ENSDARG00000023903ZDB-GENE-030911-8ZFIN:ZDB-GENE-030911-8
Gene Ontology
Molecular Functionhistone acetyltransferase activity, metal ion binding, sequence-specific DNA binding, more...sequence-specific DNA binding transcription factor activity
Biological Processcellular response to DNA damage stimulus, transcription, DNA-templated
Cellular Componentmitochondrial outer membrane, nucleus
Links to other databases
Entrez Gene395727
Ensembl GeneENSGALG00000009287
KEGGgga:395727
GEISHA IdATF2.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTATAAAAGCTTGCGGCCGCAGAATATAAATCTGACAGGTAGCACGACGAC
Reverse cDNA Template PrimerGCTCTAGAAATTAACCCTCACTAAAGGTGCATGGCGGTTACAGGGCAcDNA Template Length1250
Forward cDNA Template Probeshow
GGATAGGANCTTAATCTGAGGNAATGAGTAGAGACTAACCCTTTTTATGCACTGCCCCTGGATGTGGTCAGCCTTTTAC
CAATGAGGATCATTTGGCATGTCCATAAACATAAACATGATATGACACTGAAATTTGGTCCGGCTCGTAATGATAGTGT
CATTGTGGCTGATCCGACACCAACACCAACTCGATTCTTGAAGAATTGTGAAGAAGTGGGCTTATTCAATGAATTAGCA
AGTACCATTTGAAAATGAGTTTAAAAAGGCTTCTGAAAATGATATTAAGAAAATGCCTCTATATCTGTCTCCTCTTGCG
ACACCAATTATAAGAAACAAAATTGAAGAACCTTCTGTTGTACAGACCACTCCTCAAGATAGTCCTTTACCTCATCCAT
AGTCTACTACCAATGATGAAAAGGAAGTGTCCCTGCAGCATACTGCACAGCCCACATACAACAATAGTTCGTCCAGCAT
CACTACCGGTTCCTAACGTACTACTTACAAGTTCTGACTACAAGTGTTATTATTCAGCAGGCAATACCATCACCAACGT
CTAGTACTGTTATTACCCACGCTCCATCCTCCAACAAACCAATAGTTCCTGTTCCAAGCCCGTTTCCTCTGCTGTTACA
TCTTCCTAATGGACAAACCATGCCTGTTGCTATTCCTGCATCTATTACAAATTCCAACATGCATGTCCCTGCTGCACTT
CCACATGTTAGACCTGTCACTCAGATGCCTAATATCCCAAGAATCCAACGGCCTTCCTCCCCCAACCCAGTAGTGTCTG
AGGCTAAATTGAAATTGAAAGCAACCTTGACCCCTCTTCACCCTTAGGTAAAAAATGGAGATACTGCCAAAGGAACATC
CTAGTGAGTTGGTTATGACTCAATCAAGAAAAGCCCCTTCCCCATTCACTACTGCAACCTGCAACTTCAACAACTGAAA
AACCGATTTCCTAGCTTACCCTTCCAAAAAACTTTTATAACCAGTTGCCGGGAAAAAAAACTGTAATGAAAAACCCAAT
AATAACAAAGAATTTTCTTGGCAAAACCAACTTTTTCCTTCCCAACCCAAAAAAACAGAAGGTCCGGGTCCGTCATTGT
AAAAAAAGTCTAAAATCTTAACTCCCTAAGGGCCAATAAAAAAAAATCCCCCCCTGAAAAAAAGGGCCAAAGAAAAACT
TTTTGCTCTAAAATCCCTTACCCCGCCCCTTAGAGGGAAATTTAAAAAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
Early Mesoderm
Epiblast
 
7-12
stage 7
stage 8
stage 8
stage 9
stage 10
stage 11
Area Opaca
Blood Islands
Extraembryonic Mesoderm
Head Mesenchyme
Headfold
Heart
Intermediate Mesoderm
Lateral Plate Mesoderm
Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites
 
13-18
stage 13
stage 17
stage 18
Blood Islands
Extraembryonic Mesoderm
Head Mesenchyme
Heart
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites
Widespread Expression
 
19-24
stage 21
stage 22
stage 23
Leg
Neural Plate/Tube
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
Widespread Expression
Wing
 
25
stage 25
Leg
Neural Plate/Tube
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
Widespread Expression
Wing
 

Mouse

EmageMGI:109349
MGI GXDMGI:109349

Frog

Xenbase961087

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030911-8
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