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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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KLF4
Kruppel like factor 4

Gene

Official Symbol	KLF4
Official Full Name	Kruppel like factor 4
CGNC ID	28582
also known as	Krueppel-like factor 4\|Kruppel-like factor 4 (gut)
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC

Sequence Information

Genomic
RNA	XM_001233583
Polypeptide	XP_001233584

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	9314	ENSG00000136826		MIM:602253
Mouse	16600	ENSMUSG00000003032	All phenotypic alleles (4):Targeted, knock-out(3) Targeted, other(1)	MGI:1342287
Xenopus	550034, 379518			1015048
Zebrafish	562155, 65238	ENSDARG00000038792	ZDB-GENE-111014-1, ZDB-GENE-010129-1	ZFIN:ZDB-GENE-111014-1, ZFIN:ZDB-GENE-010129-1

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	770254
Ensembl Gene
KEGG	gga:770254

Entry 1

GEISHA Id	ChEST913e4	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show CCCGGCTACCCGACCTTCCTGCCCGAGCAGCTGCCCCCCGGCACGCTGCAGTACCAAGAGCTGATGCCGCCGGGGAGCT GCCTGCCAGAGGAGACAAAGCCCAAGAGGGGACGGCGGTCATGGCCTCGAAAAAGAACAGCCACTCACACCTGTGACTA CGCAGGCTGCGGCAAGACCTACACCAAGAGCTCTCATCTCAAGGCACACCTGAGAACCCACACAGGTGAGAAACCTTAT CACTGTGACTGGGAAGGCTGCGGATGGAAGTTTGCCCGATCTGATGAACTTACTCGTCATTACCGAAAACACACGGGCC ACCGCCCTTTCCAGTGCCAGCGGTGTGACAGAGCATTTTCCAGGTCGGATCACCTCGCCTTACACATGAAGAGGCACTT TTAATTGGAAGCAGTGGATCTTTCCCTAACTGCCTTAGAGATTCAGTATTTACAGCACAAGGACTGCTTTCCGCAAGAA GGGGAGAACCCAGTTTAAGCACTACAGAGAATCATGGTGAAGTCTTCCAAAAAGAGTGGAAAGAGGGATAATTGCATAT GGACATTGCAACTTTTTTTTTTTTAACATACGTTTTAAAGAAAACCAAAAACATTGGGGTCAATGACGTGGATCTTCTT CTATCATCCCATTGTGTAAATCCAACTTGAATTATTTCCGGACTACAAAATGCCAGGAGTGACTGAAGTCACGGATATC AGGTTAAACCAGACTGCGTAGTTCGGAGGGTCGGGATTCTCACCCGGGGGAAATGACATTCCCTTAATTTTCCTTTCAA TGCATTATTAGATGTACTTGTCATCTTGTACTCCCTTTTTCTTCCTTCTAAAAGCCTTACATGTTACAGAGG

Stage

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Location (click to highlight)

Comments (click to highlight)

1-3

stage 3

Primitive Streak

4-6

stage 4

stage 5

Hensen's Node
Primitive Streak

7-12

stage 8

Neural Plate/Tube

neural folds

19-24

stage 21

stage 23

Head Mesenchyme
Spinal Ganglia and Nerves
Tail

25-27

stage 27

Face Mesenchyme
Leg Ectoderm
Leg Mesenchyme
Sclerotome
Spinal Ganglia and Nerves
Surface Ectoderm
Tail
Trunk Mesenchyme
Wing Mesenchyme

Beak
beak
eye muscles (dorsal and ventral oblique, lateral rectus)
inner thigh
trigeminal?

Entry 2

GEISHA Id	KLF4.Antin.2010	Data Source	Publication
Complete cDNA Template Probe	show CCCGGCTACCCGACCTTCCTGCCCGAGCAGCTGCCCCCCGGCACGCTGCAGTACCAAGAGCTGATGCCGCCGGGGAGCT GCCTGCCAGAGGAGACAAAGCCCAAGAGGGGACGGCGGTCATGGCCTCGAAAAAGAACAGCCACTCACACCTGTGACTA CGCAGGCTGCGGCAAGACCTACACCAAGAGCTCTCATCTCAAGGCACACCTGAGAACCCACACAGGTGAGAAACCTTAT CACTGTGACTGGGAAGGCTGCGGATGGAAGTTTGCCCGATCTGATGAACTTACTCGTCATTACCGAAAACACACGGGCC ACCGCCCTTTCCAGTGCCAGCGGTGTGACAGAGCATTTTCCAGGTCGGATCACCTCGCCTTACACATGAAGAGGCACTT TTAATTGGAAGCAGTGGATCTTTCCCTAACTGCCTTAGAGATTCAGTATTTACAGCACAAGGACTGCTTTCCGCAAGAA GGGGAGAACCCAGTTTAAGCACTACAGAGAATCATGGTGAAGTCTTCCAAAAAGAGTGGAAAGAGGGATAATTGCATAT GGACATTGCAACTTTTTTTTTTTTAACATACGTTTTAAAGAAAACCAAAAACATTGGGGTCAATGACGTGGATCTTCTT CTATCATCCCATTGTGTAAATCCAACTTGAATTATTTCCGGACTACAAAATGCCAGGAGTGACTGAAGTCACGGATATC AGGTTAAACCAGACTGCGTAGTTCGGAGGGTCGGGATTCTCACCCGGGGGAAATGACATTCCCTTAATTTTCCTTTCAA TGCATTATTAGATGTACTTGTCATCTTGTACTCCCTTTTTCTTCCTTCTAAAAGCCTTACATGTTACAGAGG
Citation	Antin PB, Pier M, Sesepasara T, Yatskievych TA, Darnell DK. Embryonic Expression of the Chicken Krüppel-like (KLF) Transcription Factor Gene Family. Dev Dyn. 2010 Jun;239(6):1879-87.
Copyright	Copyright © 2010 John Wiley & Sons, Inc. All Rights Reserved.
Comments	Authors indicated probe came from ChEST913e4. The partial NCBI sequence associated with this clone is shown here.