GEISHA - A Chicken Embryo Gene Expression Database
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PRKDC
protein kinase, DNA-activated, catalytic polypeptide

Gene
Official SymbolPRKDC
Official Full Nameprotein kinase, DNA-activated, catalytic polypeptide
CGNC ID9779
also known asDNA-PKCS, dnapkcs, DNA-dependent protein kinase catalytic subunit|DNA-PK catalytic subunit, DNA-dependent protein kinase catalytic subunit, DNA-PK catalytic subunit
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_204658
PolypeptideNP_989989
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human5591ENSG00000253729MIM:600899
Mouse19090ENSMUSG00000022672All phenotypic alleles (9):Spontaneous(2) Chemically induced(2) Targeted, knock-out(3) Targeted, other(1) Transgenic(1) MGI:104779
Xenopus100488663, 373602494613
Zebrafish562283ENSDARG00000075083ZDB-GENE-030131-9008ZFIN:ZDB-GENE-030131-9008
Gene Ontology
Molecular FunctionATP binding, DNA binding, DNA-dependent protein kinase activity
Biological ProcessDNA repair, double-strand break repair, double-strand break repair via homologous recombination, more...double-strand break repair via nonhomologous end joining
Cellular Componentnonhomologous end joining complex, nucleolus, nucleoplasm
Links to other databases
Entrez Gene395376
Ensembl GeneENSGALG00000012914
KEGGgga:395376
GEISHA Id53PData SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
CGTTTGGCTCAGCCACACAGTTTCTGCCCGTGCCAGAGCTGATGCCTTTCCGCCTGACGCGCCAGTTTGTCAATCTGAT
GATGCCAGTGAAGGAGTGGGGCCTCATTTACAGCGTGATGGTGCATGCCCTGAGAGCGTACCGTGCGGATCCCGATCTC
CTCATCAGCACAATGGATGTGTTTGTAAAAGAGCCTTCTCTGGACTGGAAGAACTTTGAACAAAGGCAGCTGAAAAAAG
GAGGCACGTGGATTAAGGAAATAAACACCGCTGAAGTAAACTGGTACCCCTTGCAAAAAGTCAGCTATGTCAAAAGGAA
GCTTACGGGTGCCAATCCTGCACGAATCACTTGTGATGAGCTGCGCCTGGGCTATGAGAAGTTGCCTTTTTACAATGAC
TTTGCAGCTGTTGCTCGTGGCAGCGCTGACCATAATATCAGAGCCAAAGAGCCAGAGGACAGACTGTCTGAGGAGACCC
AGGTGCGGTGCCTGATAGACCAAGCGACGGACCCCAACCTCCTCGGCAGGGTGTGGGAAGGATGGGAACCTTGGATGTG
AGGCTGCTCTCGAAAGTCCAGTCTGACGAGGGGAGGGAACCCTCATACACAGCTGCAGCCAGTCTCAATTTTAAGGCCA
AGGACGCGAAAAGTCACTTTTATCGTCGTTGGTTAACTTGACTA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 21
stage 21
stage 23
Limb Buds
Ubiquitous Embryonic
Unlabeled Extraembryonic
longer color
25
stage 25
Limb Buds
Pharyngeal Arches and Clefts
 

Mouse

EmageMGI:104779
MGI GXDMGI:104779

Frog

Xenbase494613

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-9008
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