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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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BMP6
bone morphogenetic protein 6

Gene

Official Symbol	BMP6
Official Full Name	bone morphogenetic protein 6
CGNC ID	9693
also known as	bone morphogenetic protein 6
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI

Sequence Information

Genomic
RNA	XM_418956
Polypeptide	XP_418956

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	37778			FBgn0024234
Human	654	ENSG00000153162		MIM:112266
Mouse	12161	ENSMUSG00000039004	All phenotypic alleles (2):Targeted, knock-out(1) Targeted, other(1)	MGI:88182
Xenopus	100127176, 734440			479133
Zebrafish	503761	ENSDARG00000015686	ZDB-GENE-050306-42	ZFIN:ZDB-GENE-050306-42

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	420868
Ensembl Gene
KEGG	gga:420868

Entry 1

GEISHA Id	BMP6.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	TTATAAAAGCTTGCGGCCGCAGAATATGCAGCACCACAAGGAGTTCAAG
Reverse cDNA Template Primer	GCTCTAGAAATTAACCCTCACTAAAGGAACCAGAGTTTGGACGATGGCG	cDNA Template Length	700
Complete cDNA Template Probe	show GCAGCACCACAAGGAGTTCAAGTTCAATTTGTCTCAGATTCCCGAGGGCGAGGCTGTCACAGCTGCTGAGTTTCGGATC TACAAGGACTGCGTGGTGGAGAGCTTTAAAAACCAAACTTTTCTTATCAGCATCTACCAAGTGCTGCAGGAACATCCAA ACAGAGCCTCTGACCTGTTTCTGCTGGATACGCGGGCGGTATGGGCTTCGGAGGAGGGCTGGTTGGAGTTTGATGTCAC TGCCACCAGTAACATGTGGGTGATGAATCCTCAGCACAACATGGGACTCCAGCTGAGCGTGGTGACCCACGACGGTTTC AGTGTAAATCCTAGAGAAGCAGGCCTTATAGGGCGAGATGGCCCTTACGACAAGCAGCCTTTCATGGTGGCATTCTTCA AAGTGAGCGAAGTCCACGTGCGGACTACGAGGTCAGCGGCAAGCAGGCGCAGGCAGCAAAATCGAAACCGCTCCACTCA GGCTCAGGATGTTTCCAGGGTGTCAACTGTCACAGATTACAACAGCAGTGACTTAAAAACCGCGTGCAGAAAGCATGAA CTTTACGTTAGCTTCCAAGACTTGGGATGGCAGGACTGGATAATCGCTCCAAAGGGCTATGCAGCCAACTACTGTGATG GGGAGTGCTCCTTTCCACTCAATGCACATATGAACGCAACCAACCACGCCATCGTCCAAACTCTGGTTC

Stage

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Location (click to highlight)

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4-6

stage 4

stage 5

Early Mesoderm
Epiblast

7-12

stage 8

stage 10

stage 12

Anterior Neuropore
Head Mesenchyme
Nasal Placode/Nerve
Somites

Dorsal view.

13-18

stage 13

stage 14

stage 15

stage 17

Anterior/Second Heart Field
Blood Vessels
Head Mesenchyme
Lateral Plate Mesoderm
Lung
Nasal Placode/Nerve
Paraxial Mesoderm
Somites

Dorsal view.

19-24

stage 19

stage 20

stage 21

Eye
Head Mesenchyme
Heart
Lung
Mesonephros
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Somites

stage 25

Entry 2

GEISHA Id	BMP6.Kruithof.2006	Data Source	Publication
Complete cDNA Template Probe	show ATGGCGCACGGATGTCGTCCATGCGACACAGGATTTCGTGTGGTTGATGGAGCACTGGAACAGATTGCTAAGAGCGGTT GTGGAGTCTCCTTCTATGGAGATATCCAAGACCTGGCTGGATCCAAGGCCTACCTGTGTGACCTGCTCGGCGCCTGCCG CCCCGCCGAGCCCCCTTTACCCGCCGCCGCCCCGGGCTTCCTCTACCGGCGGCTGAAGTCGCACGAGAAGCGGGAGATG CAGCGGGAGATCCTCTCCGTGCTGGGGCTGCCGCACCGTCCTCGCCCGCCGCCGCGGGAACCGCCGGCGCCGCCGCCGG GACGGCTGCCGGCGGCGCCGCGCTTCATGCTGGACCTGTACCACGCGCTGGCCGAGGGCGCGGAGGGAGCCGCGGGCGC GGAGAGGGGCGGCCGCCCGCAGCCCCCCGCCCCGCTGCCGCCGGTGCCCAGCGCGCAGGACAGCGCCTTCCTCAACGAC GCCGACATGGTGATGAGCTTCGTCAACCTGGTTGAGTACGACAAGGAGTTCACCCCTCACCAGCAGCACCACAAGGAGT TCAAGTTCAATTTGTCTCAGATTCCCGAGGGCGAGGCTGTCACAGCTGCTGAGTTTCGGATCTACAAGGACTGCGTGGT GGAGAGCTTTAAAAACCAAACTTTTCTTATCAGCATCTACCAAGTGCTGCAGGAACATCCAAACAGAGCCTCTGACCTG TTTCTGCTGGATACGCGGGCGGTATGGGCTTCGGAGGAGGGCTGGTTGGAGTTTGATGTCACTGCCACCAGTAACATGT GGGTGATGAATCCTCAGCACAACATGGGACTCCAGCTGAGCGTGGTGACCCACGACGGTTTCAGTGTAAATCCTAGAGA AGCAGGCCTTATAGGGCGAGATGGCCCTTACGACAAGCAGCCTTTCATGGTGGCATTCTTCAAAGTGAGCGAAGTCCAC GTGCGGACTACGAGGTCAGCGGCAAGCAGGCGCAGGCAGCAAAATCGAAACCGCTCCACTCAGGCTCAGGATGTTTCCA GGGTGTCAACTGTCACAGATTACAACAGCAGTGACTTAAAAACCGCGTGCAGAAAGCATGAACTTTACGTTAGCTTCCA AGACTTGGGATGGCAGGACTGGATAATCGCTCCAAAGGGCTATGCAGCCAACTACTGTGATGGGGAGTGCTCCTTTCCA CTCAATGCACATATGAACGCAACCAACCACGCCATCGTCCAAACTCTGGTTCATCTTATGAATCCTGATTACGTTCCCA AACCATGCTGTGCACCTACCAAACTAAATGCCATATCAGTTCTTTATTTCGATGATAATTCTAATGTAATCTTGAAGAA ATACAGGAATATGGTAGTAAGAGCCTGTGGATGTCACTGA
Citation	Kruithof BP, van Wijk B, Somi S, Kruithof-de Julio M, Pérez Pomares JM, Weesie F, Wessels A, Moorman AF, van den Hoff MJ. BMP and FGF regulate the differentiation of multipotential pericardial mesoderm into the myocardial or epicardial lineage. Dev Biol. 2006 Jul 15;295(2):507-22. Epub 2006 Apr 3.
Copyright	Copyright © 2006 Elsevier B.V. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc #XM_418956).

Stage

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13-16

stage 16

Unlabeled

Entry 3

GEISHA Id	BMP6.Zhang.2003	Data Source	Publication
Complete cDNA Template Probe	show CGAGCGCTGAGCCCCGCCGGCCTGGCTGCCCCCCGCCGGCCCATGCGCTAGGAGGGCCGAGGGCGGCGGGGAGCCCCCG GGGAGAGGGGGAAGCGGGGAGCTCGCCCGGCCCAGCGCCATGCCGCGGCGGCTGGCCTGGCTGTGCTGCTGCTGGGCGC TGCTGAGCGGCGCCTGCCGCCCCGCCGAGCCGCCGCCGCCCGCCGCCGCCCCGGGCTTCCTCTACCGGCGGCTGAAGTC GCACGAGAAGCGGGAGATGCAGCGGGAGATCCTCTCCGTGCTGGGGCTGCCGCACCGTCCTCGCCCGCCGCCGCGGGAA CCGCCGGCGCCGCCGCCGGGACGGCTGCCGGCGGCGCCGCGCTTCATGCTGGACCTGTACCACGCGCTGGCCGAGGGCG CGGAGGGAGCCGCGGGCGCGGAGAGGGGCGGCCGCCCGCAGCCCCCCGCCCCGCTGCCGCCGGTGCCCAGCGCGCAGGA CAGCGCCTTCCTCAACGACGCCGACATGGTGATGAGCTTCGTCAACCTGGTTGAGTACGACAAGGAGTTCACCCCTCAC CAGCAGCACCACAAGGAGTTCAAGTTCAATTTGTCTCAGATTCCCGAGGGCGAGGCTGTCACAGCTGCTGAGTTTCGGA TCTACAAGGACTGCGTGGTGGAGAGCTTTAAAAACCAAACTTTTCTTATCAGCATCTACCAAGTGCTGCAGGAACATCC AAACAGAGCCTCTGACCTGTTTCTGCTGGATACGCGGGCGGTATGGGCTTCGGAGGAGGGCTGGTTGGAGTTTGATGTC ACTGCCACCAGTAACATGTGGGTGATGAATCCTCAGCACAACATGGGACTCCAGCTGAGCGTGGTGACCCACGACGGTT TCAGTGTAAATCCTAGAGAAGCAGGCCTTATAGGGCGAGATGGCCCTTACGACAAGCAGCCTTTCATGGTGGCATTCTT CAAAGTGAGCGAAGTCCACGTGCGGACTACGAGGTCAGCGGCAAGCAGGCGCAGGCAGCAAAATCGAAACCGCTCCACT CAGGCTCAGGATGTTTCCAGGGTGTCAACTGTCACAGATTACAACAGCAGTGACTTAAAAACCGCGTGCAGAAAGCATG AACTTTACGTTAGCTTCCAAGACTTGGGATGGCAGGACTGGATAATCGCTCCAAAGGGCTATGCAGCCAACTACTGTGA TGGGGAGTGCTCCTTTCCACTCAATGCACATATGAACGCAACCAACCACGCCATCGTCCAAACTCTGGTTCATCTTATG AATCCTGATTACGTTCCCAAACCATGCTGTGCACCTACCAAACTAAATGCCATATCAGTTCTTTATTTCGATGATAATT CTAATGTAATCTTGAAGAAATACAGGAATATGGTAGTAAGAGCCTGTGGATGTCACTGACAAAGTCTTCACGTGGACTC TGTGGTTCTACCATGAACTTCCATGCTACCTTCCATACTTTCATGAACTACCTGACATTGGAAAAAAAAAAAAAATAAG GTTGATGATTCACCTTTCACATCACCATTTATGTGCCTTGTGTGAGGAAAGGGCTTGTGGAACCACATGCTGTGGCGTG AGCAAAGAGCTGGAATTCTTAAAATGCGACCCTATGCTGCAGTGGCCGCTCAGCTCTGCAGCGCCGGAGCTCGCAAAGC AGCAATATGCCTGCACACGTGCTTACTTGGCTGGGATGGTCTTAATCTCACCTAGCAGCTTGGCCTTATCAGTTGCTTG GATGTGTGCTACAGTTTAAGCAGATGGACATCCAACACCTGAAACCAGTGGGGTTTTTGAGGGGAGAGGGTTGCTACAG AAAGCAGTTACTACATCAGACTTAGAATATACCATGTGTACAATAGTAATATGAAATTTCTAAGGGTAGGAATTGCCTT TTGCCTATAAAGACCAGCTGTTACACCTCTCCTGTTTGTTTCCTCTGAAACCTGTCATGATAGTACGCATCTTAAATTG TGCCAAAGCAAATCTTTTGGGTCCCTTGGTCTCCAAGCACAGTTTAAATCTGATGCTGCAAGCGTAAGATGGCTTGGCT GCACCCTGTGTTAGAAATGTTAGACTAGCATGAACTTGGACCGTGGCTGGTCTTTCCTGGTCAGCGTTTAACTGTGAGT AGCGTAACTTCACCTACTTGTTCTTACACGACTTCCTTCCACTCCCTGAGTGGAGCTGCCTCATCTTACTACCACTTGC CCAGGAAGGAAGTCTGGACACTTCTCCAGCTGTAACTCAGACGTAAAAGTTTAGGGGCCATTCGTTCTCTAGTTGGACA ATTTATTTACAGGAAGACAAAAGGTCAGCAACTTACTTATTCAAATATTTGGCCAGCCTTTCCCCTTCAACTCACGCAA CTAACTAACTGGTATAAAGGATACATTCACACAGTAGCCACGGTTTGTCTAGCAGAAGCTAACAGCAAATTGTTTCGAT CAATATTAAACTTGTATTAAATGCACTTACCTCTGA
Citation	Zhang D, Schwarz EM, Rosier RN, Zuscik MJ, Puzas JE, O'Keefe RJ.ALK2 functions as a BMP type I receptor and induces Indian hedgehog in chondrocytes during skeletal development. J Bone Miner Res. 2003 Sep; 18(9):1593-604
Copyright	Copyright © 1999 - 2018 John Wiley & Sons, Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # XM_015275997.1).

Stage

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19-23

stage 23

Wing

Entry 4

GEISHA Id	BMP‐6.Belecky-Adams.2001	Data Source	Publication
Complete cDNA Template Probe	show GGTGATTTGCCTCCGCCGCCAGCAGCCCGGCTCCGGCCAGCCCGCGGGGACCGGGGCTGCGGCCGCAGGCAGGAGCCGC TCGCTCCCTCGTTCGTAGCCCGGAAAAGTTTGCTCCTCGTCCTCCTTCTCCTCCTCGTCGTCGTCCCCGCCGCGCAGCA GCCGCCGGGCATGGCGAGCTGAGCTCGGCCCGGCAGCCGGGCCGGGGGCGGCCCCGGCGCACCTGAGCGGCGGCGGCGG GGGGCTCGCAGCGCGCTGCCCCGCGGGCGGCCATGCGCGGCGGGGGCGGGGGCGAGCGCTGAGCCCCGCCGGCCTGGCT GCCCCCCGCCGGCCCATGCGCTAGGAGGGCCGAGGGCGGCGGGGAGCCCCCGGGGAGAGGGGGAAGCGGGGAGCTCGCC CGGCCCAGCGCCATGCCGCGGCGGCTGGCCTGGCTGTGCTGCTGCTGGGCGCTGCTGAGCGGCGCCTGCCGCCCCGCCG AGCCGCCGCCGCCCGCCGCCGCCCCGGGCTTCCTCTACCGGCGGCTGAAGTCGCACGAGAAGCGGGAGATGCAGCGGGA GATCCTCTCCGTGCTGGGGCTGCCGCACCGTCCTCGCCCGCCGCCGCGGGAACCGCCGGCGCCGCCGCCGGGACGGCTG CCGGCGGCGCCGCGCTTCATGCTGGACCTGTACCACGCGCTGGCCGAGGGCGCGGAGGGAGCCGCGGGCGCGGAGAGGG GCGGCCGCCCGCAGCCCCCCGCCCCGCTGCCGCCGGTGCCCAGCGCGCAGGACAGCGCCTTCCTCAACGACGCCGACAT GGTGATGAGCTTCGTCAACCTGGTTGAGTACGACAAGGAGTTCACCCCTCACCAGCAGCACCACAAGGAGTTCAAGTTC AATTTGTCTCAGATTCCCGAGGGCGAGGCTGTCACAGCTGCTGAGTTTCGGATCTACAAGGACTGCGTGGTGGAGAGCT TTAAAAACCAAACTTTTCTTATCAGCATCTACCAAGTGCTGCAGGAACATCCAAACAGAGCCTCTGACCTGTTTCTGCT GGATACGCGGGCGGTATGGGCTTCGGAGGAGGGCTGGTTGGAGTTTGATGTCACTGCCACCAGTAACATGTGGGTGATG AATCCTCAGCACAACATGGGACTCCAGCTGAGCGTGGTGACCCACGACGGTTTCAGTGTAAATCCTAGAGAAGCAGGCC TTATAGGGCGAGATGGCCCTTACGACAAGCAGCCTTTCATGGTGGCATTCTTCAAAGTGAGCGAAGTCCACGTGCGGAC TACGAGGTCAGCGGCAAGCAGGCGCAGGCAGCAAAATCGAAACCGCTCCACTCAGGCTCAGGATGTTTCCAGGGTGTCA ACTGTCACAGATTACAACAGCAGTGACTTAAAAACCGCGTGCAGAAAGCATGAACTTTACGTTAGCTTCCAAGACTTGG GATGGCAGGACTGGATAATCGCTCCAAAGGGCTATGCAGCCAACTACTGTGATGGGGAGTGCTCCTTTCCACTCAATGC ACATATGAACGCAACCAACCACGCCATCGTCCAAACTCTGGTTCATCTTATGAATCCTGATTACGTTCCCAAACCATGC TGTGCACCTACCAAACTAAATGCCATATCAGTTCTTTATTTCGATGATAATTCTAATGTAATCTTGAAGAAATACAGGA ATATGGTAGTAAGAGCCTGTGGATGTCACTGACAAAGTCTTCACGTGGACTCTGTGGTTCTACCATGAACTTCCATGCT ACCTTCCATACTTTCATGAACTACCTGACATTGGAAAAAAAAAAAAAATAAGGTTGATGATTCACCTTTCACATCACCA TTTATGTGCCTTGTGTGAGGAAAGGGCTTGTGGAACCACATGCTGTGGCGTGAGCAAAGAGCTGGAATTCTTAAAATGC GACCCTATGCTGCAGTGGCCGCTCAGCTCTGCAGCGCCGGAGCTCGCAAAGCAGCAATATGCCTGCACACGTGCTTACT TGGCTGGGATGGTCTTAATCTCACCTAGCAGCTTGGCCTTATCAGTTGCTTGGATGTGTGCTACAGTTTAAGCAGATGG ACATCCAACACCTGAAACCAGTGGGGTTTTTGAGGGGAGAGGGTTGCTACAGAAAGCAGTTACTACATCAGACTTAGAA TATACCATGTGTACAATAGTAATATGAAATTTCTAAGGGTAGGAATTGCCTTTTGCCTATAAAGACCAGCTGTTACACC TCTCCTGTTTGTTTCCTCTGAAACCTGTCATGATAGTACGCATCTTAAATTGTGCCAAAGCAAATCTTTTGGGTCCCTT GGTCTCCAAGCACAGTTTAAATCTGATGCTGCAAGCGTAAGATGGCTTGGCTGCACCCTGTGTTAGAAATGTTAGACTA GCATGAACTTGGACCGTGGCTGGTCTTTCCTGGTCAGCGTTTAACTGTGAGTAGCGTAACTTCACCTACTTGTTCTTAC ACGACTTCCTTCCACTCCCTGAGTGGAGCTGCCTCATCTTACTACCACTTGCCCAGGAAGGAAGTCTGGACACTTCTCC AGCTGTAACTCAGACGTAAAAGTTTAGGGGCCATTCGTTCTCTAGTTGGACAATTTATTTACAGGAAGACAAAAGGTCA GCAACTTACTTATTCAAATATTTGGCCAGCCTTTCCCCTTCAACTCACGCAACTAACTAACTGGTATAAAGGATACATT CACACAGTAGCCACGGTTTGTCTAGCAGAAGCTAACAGCAAATTGTTTCGATCAATATTAAACTTGTATTAAATGCACT TACCTCTGATTCTTGCATTTAAAAGGCTTCTTGTAAATACAAGCTATAATTTATTGCACTTTTCACTGTATATTCATTG TGCTGTATCATTTATAGAAAGACTGCTTTTTAAAAAAGTTTTTATTTAGAAAAATCTCAGTGTAAACAATTGTATCACT TCGATTTTATACAAGAAACTCATGAGATTGTGCTTCACTAGAAAGTTGTTAAAAACATGATAATAAAGGCTTCCTTTAA GGCAGAAGTATGTACATTGATCTAACACATCTGCCAGTACAACACTTAGCTTCCACTGTGGATTTTTCACCCTTGCACA TTTTTAGATTGAACAGAACCAAAAGGTTCTTGACAGACAGTGAAGTCCCAGGAGCTATCCACTGATTTCCAAGTTCATT ACTGTTTTGCTTTTTTTAAAAATGAAAACAAACCTACTCCATATGATGGATAAAATCAGCATTTTGACAGATTAGTCAA ATTAGCCTGTAGTCCGTCATACTTATTCCATGAGTTTCTGTGCACACACGGGATGGCAGAATTCAGTCCTTGGTTTGCT GCTGTCATTGTACTGTGACAGTACCTGCAGTGTACATTCTTTGGCTTTCAACTGTCAAACATGGAGCATCTTGTGCACC AAAGAATAGATCCGTATCATAATCCAAGGCAACATGGAGTGCATGGGCCTAACATTCAAACTTAGCGACACTTACTTAC TCACACCTGGAAAAAAGGTTAAGGCTCAGGAAGAGTTGGGAACTATTTTAGACTACTGTTGAACAGCAGAGTGGAAAAA TTACTTACATTGTACTACTTGTTCTCCAAGTGCTCTGACTAAGGAGCAGGTCAACACAAAGTCTGGATTCAGGTCAAGG TAGGAAATGCATGTAATCAGCTCTGAGGTCTAACTGATCGTTTAATATTAACGAAGTAGCTATAATAGAGCCAGTTCAC TTTGACTCTATATAAAGTAGAGCATAGTTACTCCTCTGGAGCTAAAAAGAAGCAGTCTACAACAAAAAACATCCACCTG ACACATACACTATGGCAACAGTAATGTTCAGGCACATGTTACAGTACCATTGCTTTCATTATGGCTAGACCTCCCACGC TGAGAGGATTAACAGGAAACAACCAGCTCATGGTGGCCTGGTATCTTCCAAATGTGTGTTTTCAGCATCCTGTGACTTT CCATTTCTTAAGCAGCAGCCATATTAAGACAAGCAGGTTGGAAGTACCGTTGTAGAGGCAGTAGTTATTTAATACAGCT GCAGCTTTTAGGTTTCTAGTAATAGCATGCAGTTTGTAAGGATTACTTTTTTTTAACCAAATCTAACCTGAAGACAAAA ATATTCTGCTGGTGCCCTTAATTTGGTTTTCTTAATGTATTTTAGTCTGAATGGAAACCATTTACACTTCATTGCGGGA ATGCAGAAATGTAGCAATACTACTAATACTGAAAATATTCTCTGTTTGCACAGTAACTACTTGTTAGTTTTCCTTCCCA AGTAGGGTATCTTGTCTTTAACACACACAGAGGGAAGATACCAATGTTCAGTACATTCCATTTCCTAAAAACAAACAAA AGAA
Citation	Belecky-Adams T, Adler R. Developmental expression patterns of bone morphogenetic proteins, receptors, and binding proteins in the chick retina. J Comp Neurol. 2001 Feb 19;430(4):562-72.
Copyright	Copyright © 2001 Wiley‐Liss, Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_015275997.2).