GEISHA - A Chicken Embryo Gene Expression Database
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CTCFL
CCCTC-binding factor like

Gene
Official SymbolCTCFL
Official Full NameCCCTC-binding factor like
CGNC ID49729
also known asCTCF, transcriptional repressor CTCF|11-zinc finger protein|CCCTC-binding factor (zinc finger protein)|CTCFL paralog, Transcriptional repressor CTCF , CCCTC-binding factor, CTCFL paralog, 11-zinc finger protein
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_205332
PolypeptideNP_990663
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human10664ENSG00000102974MIM:604167
Mouse13018ENSMUSG00000005698All phenotypic alleles (5):Targeted, other(5) MGI:109447
Xenopus100101689, 379621862913
Zebrafish415104ENSDARG00000056621ZDB-GENE-040624-5ZFIN:ZDB-GENE-040624-5
Gene Ontology
Molecular FunctionDNA binding, metal ion binding, protein binding
Biological Processregulation of transcription, DNA-templated, transcription, DNA-templated
Cellular Componentnucleus
Links to other databases
Entrez Gene396274
Ensembl GeneENSGALG00000001817
KEGGgga:396274
GEISHA IdChEST717l23Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
CACGCAATCATTCAGGTTGAAGACCAGAACACTGGTGAAATCGAAAACATTATAGTAGAAGTAAAGAAAGAACCTGATG
CAGAAACAGTAGAGGAAGAGGAGGAAGCTCAGCCTGCTGTAGTGGAAGCTCCAAACGGAGACCTCACTCCTGAGATGAT
TCTCAGCATGATGGACCGGTGATGGAGGAAGACCACGCCGGATGACTGAACTGGCCTGGGCTGTGTTTAAGCGGCTCAA
ATCTATTTTTCCTTTTACCTTTTTTTCTTGGCTTTGGGAAATGCATCATTTTAGACCATTTTACCAAACATACTGGGAA
ATAAAACTTCAAAATGATGTTAGAATGTGATTTAACTAGAACTTGCTGTTTTATGTTAGCATTACAGGATCATGGAACA
TTAGGAAATGCTTCGGAGTCCATGAGGGTTTCCCGTGAGGTGCTTGATTAGCTTTGTTCTGAGCTGCATTGTAAACAGG
GTCCTCGGACGGCCAGCTTTACGTGCAACGAGTTTTATGATACAGAAGTGGAAGCCTTGACTAGAGTATGTGGTAAACC
ACTCCGGACTTTGCCCTTCCAGTTCCCAGAGTCCTTGAGCCTCCTTCTCTCAGTAGTGTTTTTAACTGTAAATGCAGAC
TTGGGAGGGTTCTAGACTTTTTAAATGTTTTTTGCTTTCCCCCCACTGACTAGCTCTGGTTCTCCAAGTCGGCTGCACA
CGGTAGTTTTGGCATGCTCCAACTGGTTTCTGTCCTTAATATGCTTTGCTTTCTGCAAAGCATTTCTGTAATGGTCAAG
CTTGTAAATAACTTTTTTTTTTTTTTACATTTTAATCTTTTTCCATTAATTAAGAGGTATGCAAAAATACAGTTGAAAT
A
Commentsubiquitous stage 12-22.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4
stage 4
Early Mesoderm
Primitive Streak
 

Mouse

EmageMGI:109447
MGI GXDMGI:109447

Frog

Xenbase862913

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040624-5
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