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RUNX1 Gene Summary Expression Other Species Expression JBrowse Gene Official Symbol RUNX1 Official Full Name runt-related transcription factor 1 CGNC ID 49673 also known as runt-related transcription factor 1|ch-runtB2, ch-runtB2 , RUNX1, AML-1, CBFA2, PEBP2*B gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Gene Ontology Molecular Function Biological Process Cellular Component
Links to other databases
Entry 1 GEISHA Id RUNX1.UApcr Data Source GEISHA ISH Analysis Forward cDNA Template Primer GATGGCTGGAAACGATGAG Reverse cDNA Template Primer ATTAACCCTCACTAAAGGTTATGGGATACCTACGGGC cDNA Template Length 945 Forward cDNA Template Probe show AAGCACGGTTAGTCACTGGCCCACGACTACTNAAAATGCATTCAGTATGGCCTCCAAACCGCTTCCTCTAGCCTTGCCG
Entry 2 GEISHA Id Runx1.Bollerot.2005 Data Source Publication Complete cDNA Template Probe show ACAAAAGGCACTGGGATAAAGCAGTGTGATGGCTGGGCAGAGGGTTGTAACCATGACCGTTCTTCATTTTTCACCTCCC
Citation Bollerot K, Romero S, Dunon D, Jaffredo T. Core binding factor in the early avian embryo: cloning of Cbfbeta and combinatorial expression patterns with Runx1. Gene Expr Patterns. 2005 Dec;6(1):29-39. Epub 2005 Jul 19. Copyright Copyright © 2005 Elsevier B.V. All rights reserved. Comments According to the authors, "To ensure the specific detection of Runx1 transcripts over Runx2 and Runx3, we have used two different probes. They encompass, respectively, the first 750 bp and the last 655 bp of the chick Runx1 coding sequence, the details of which will be given elsewhere (Bollerot and Jaffredo, in preparation). All the Runx1 patterns except those of the YS obtained with the 5′ end probe were established with the two probes. For each structures, the two patterns were similar." As information provided was insufficient to verify exact sequence used to synthesize probe,the sequence below was obtained from NCBI (NM_205227).
Entry 3 GEISHA Id RUNX-1.Jaffredo.2005 Data Source Publication Complete cDNA Template Probe show ACAAAAGGCACTGGGATAAAGCAGTGTGATGGCTGGGCAGAGGGTTGTAACCATGACCGTTCTTCATTTTTCACCTCCC
Citation Jaffredo T, Bollerot K, Sugiyama D, Gautier R, Drevon C (2005). Tracing the hemangioblast during embryogenesis: developmental relationships between endothelial and hematopoietic cells.
Int J Dev Biol. 2005;49(2-3):269-77. Copyright "Reprinted from Int. J. Dev. Biol., 49,Jaffredo T, Bollerot K, Sugiyama D, Gautier R, Drevon C , Tracing the hemangioblast during embryogenesis: developmental relationships between endothelial and hematopoietic cells, 269-77, Copyright (2005), with permission from Copyright © 2005 UBC Press". All rights reserved. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_205227.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-18 stage 17
stage 18
Aorta 31-44 stage 44
Aorta Blood
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