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SOHO-1 Gene Summary Expression Other Species Expression JBrowse Gene Official Symbol SOHO-1 Official Full Name sensory organ homeobox protein SOHo CGNC ID 49762 also known as sensory organ homeobox protein SOHo gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Gene Ontology Molecular Function Biological Process Cellular Component
Links to other databases
Entry 1 GEISHA Id SOHO1.Bok.2011 Data Source Publication Complete cDNA Template Probe show TCCGCCGCCACTCCTGCGGTTAGGCTCAGCGCGCCATGGTGCAGCTCGGGGGAGGCCGCGGAGCCCCACCGCCTCTCCT
Citation Bok J, Raft S, Kong KA, Koo SK, Dräger UC, Wu DK. Transient retinoic acid signaling confers anterior-posterior polarity to the inner ear. Proc Natl Acad Sci U S A. 2011 Jan 4;108(1):161-6. Epub 2010 Dec 20. Copyright copyright © by the National Academy of Sciences Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_205386).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-17
stage 17
stage 17
Ear/Otic Placode
Entry 2 GEISHA Id SOHO1.Takahashi.2003 Data Source Publication Complete cDNA Template Probe show CCATGGTGCAGCTCGGGGGAGGCCGCGGAGCCCCACCGCCTCTCCTGGCCCCACCGTCGGCCTTCAGCATCGACAGCAT
Citation Takahashi H, Shintani T, Sakuta H, Noda M. CBF1 controls the retinotectal topographical map along the anteroposterior axis through multiple mechanisms. Development. 2003 Nov;130(21):5203-15. Epub 2003 Sep 3. Copyright Published by The Company of Biologists 2007. This material is protected by a copyright retained by the authors. Comments The authors indicated the probe was the 782 bp fragment of chick SOHo1 (34-815; S69380),
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-18 stage 18
stage 18
Retina
Entry 3 GEISHA Id SOHO1.Chang.2004 Data Source Publication Complete cDNA Template Probe show TCCGCCGCCACTCCTGCGGTTAGGCTCAGCGCGCCATGGTGCAGCTCGGGGGAGGCCGCGGAGCCCCACCGCCTCTCCT
Citation Chang W, Brigande JV, Fekete DM, Wu DK. The development of semicircular canals in the inner ear: role of FGFs in sensory cristae. Development. 2004 Sep;131(18):4425-34. Epub 2004 Aug 11. Copyright Copyright is held by the authors. Published by the Company of Biologists Ltd.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 19-23 stage 23
stage 23
Ear/Otic Placode
Entry 4 GEISHA Id SOHO1.Apostolova.2007 Data Source Publication Complete cDNA Template Probe show TCCGCCGCCACTCCTGCGGTTAGGCTCAGCGCGCCATGGTGCAGCTCGGGGGAGGCCGCGGAGCCCCACCGCCTCTCCT
Citation Apostolova G, Dorn R, Ka S, Hallböök F, Lundeberg J, Liser K, Hakim V, Brodski C, Michaelidis TM, Dechant G. Neurotransmitter phenotype-specific expression changes in developing sympathetic neurons. Mol Cell Neurosci. 2007 Jul;35(3):397-408. Epub 2007 Apr 1. Copyright Copyright © 2007 Elsevier Inc. All rights reserved. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_205386.1
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 31-44 stage 44
stage 44
Spinal Ganglia and Nerves
Entry 5 GEISHA Id SOHO1.Adamska.2001 Data Source Publication Complete cDNA Template Probe show TCCGCCGCCACTCCTGCGGTTAGGCTCAGCGCGCCATGGTGCAGCTCGGGGGAGGCCGCGGAGCCCCACCGCCTCTCCT
Citation Adamska M, Herbrand H, Adamski M, Krüger M, Braun T, Bober E. FGFs control the patterning of the inner ear but are not able to induce the full ear program. Mech Dev. 2001 Dec;109(2):303-13. Copyright Copyright © 2001 Elsevier Science Ireland Ltd. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_205386).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-12 stage 10
stage 10
Ear/Otic Placode Eye 31-44 stage 44
Entry 6 GEISHA Id SOHo-1.Kiernan.1997 Data Source Publication Complete cDNA Template Probe show TCCGCCGCCACTCCTGCGGTTAGGCTCAGCGCGCCATGGTGCAGCTCGGGGGAGGCCGCGGAGCCCCACCGCCTCTCCT
Citation Kiernan AE, Nunes F, Wu DK, Fekete DM. The expression domain of two related homeobox genes defines a compartment in the chicken inner ear that may be involved in semicircular canal formation. Dev Biol. 1997 Nov 15;191(2):215-29. Copyright Copyright q 1997 by Academic Press. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_205386.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-18 stage 14
stage 15
stage 16
stage 17
stage 17
Ear/Otic Placode 19-24 stage 19
stage 19
stage 22
stage 23
stage 23
stage 24
Ear/Otic Placode 25-30 stage 28
stage 29
stage 30
Ear/Otic Placode 31-44 stage 44
stage 44
stage 44
stage 44
stage 44
Entry 7 GEISHA Id SOHO1.Freter.2012 Data Source Publication Complete cDNA Template Probe show TCCGCCGCCACTCCTGCGGTTAGGCTCAGCGCGCCATGGTGCAGCTCGGGGGAGGCCGCGGAGCCCCACCGCCTCTCCT
Citation Freter S, Muta Y, O'Neill P, Vassilev VS, Kuraku S, Ladher RK. Pax2 modulates proliferation during specification of the otic and epibranchial placodes. Dev Dyn. 2012 Nov;241(11):1716-28 Copyright Copyright © 2012 Wiley Periodicals, Inc. Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_205386.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-12 stage 9
Ear/Otic Placode 13 stage 13
stage 13
stage 13
Ear/Otic Placode all
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