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LOC417741 secreted frizzled-related protein 2-like Gene Summary Expression Other Species Expression JBrowse Gene Official Symbol LOC417741 Official Full Name secreted frizzled-related protein 2-like CGNC ID 50585 also known as secreted frizzled-related protein 5, similar to secreted Xwnt8 inhibitor sizzled gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Gene Ontology Molecular Function Biological Process Cellular Component
Links to other databases
Entry 1 GEISHA Id Sizzled.UApcr Data Source GEISHA ISH Analysis Forward cDNA Template Primer TTATAAAAGCTTGCGGCCGCAGAATATACCAAATGTGTAGTGATACCCAAGG Reverse cDNA Template Primer GCTCTAGAAATTAACCCTCACTAAAGGTGAGTTTCATAAGGCAAGAGTGAGC cDNA Template Length 641 Complete cDNA Template Probe show TTTATAAAAGCTTGCGGCCGCAGAATATACCAAATGTGTAGTGATACCCAAAGATGGACATGTGCCACGAGAATTGGGT ACTCCGAAATGAGGCTTCCCAACCTGATGGGACACACAAGCATGGCAGAGGTCGTCCTAAAATCCACCACCTGGCAGCA CCTGGTGCACACGGACTGTCACCCTCATGTGAGGATGTTCCTGTGCTCTCTGTTTGCACCCATCTGCCTGGACACGTTC ATCCATCCCTGTAGGAGTATGTGTGTTGGTGTTCGGGACAGCTGTGCGCCTGTACTTGCCTGCCATGGGCACACCTGGC CAGAAAGTCTGGACTGCAACCGGTTCCCTGCAGACGAGGACATGTGTCTGGCATCGCTTACAAAGGAATACAAATACTT GCACAAAGTCCTACCGAAGCCTGCATGCCAGACCTGCCCAGCAGTGGAGGAACTCTTCACGCACAAAAGACTTCTCGAA GTTTTCTGTGACAGTAATTTCGCAGTGAAAGTAAAGCTGTCCAAAAAAAGAGCAGTAATCGGCGACCAAGAGTACAGCA TTGAGTGCCATGTGGAATTCATCCCAGGGCTCACTCTTGCCTTATGAAACTCACCTTTAGTGAGGGTTAATTTTCTAGA GCAA
Entry 2 GEISHA Id SIZZLED.Alev.2010 Data Source Publication Complete cDNA Template Probe show GTGCCACGAGATTGGGTACTCCGAAATGAGGCTTCCCAACCTGATGGGACACACAAGCATGGCAGAGGTCGTCCTAAAA TCCACCACCTGGCAGCACCTGGTGCACACGGACTGTCACCCTCATGTGAGGATGTTCCTGTGCTCTCTGTTTGCACCCA TCTGCCTGGACACGTTCATCCATCCCTGTAGGAGTATGTGCGTTGGTGTTCGGGACAGCTGCGCGCCTGTACTTGCCTG CCATGGGCACACCTGGCCAGAAAGCCTGGACTGCAACCGGTTCCCTGCAGACGAGGACATGTGTCTGGCATCGCTTACA AAGGAATACAAATACTTGCACAAAGTCCTACCGAAGCCTGCATGCCAGACCTGCCCAGCAGTGGAGGAACTCTTCACGC ACAAAAGACTTCTTGAAGTTTTCTGTGACAGTAATTTCGCAGTGAAAGTAAAGCTGTCCAAAAAAAGAGCAGTAATCGG CGACCAAGAGTACAGCATTGAATGCCATGTGGAATTCATTACCCAGGGCTCACTC
Citation Alev C, Wu Y, Kasukawa T, Jakt LM, Ueda HR, Sheng G. Transcriptomic landscape of the primitive streak. Development. 2010 Sep 1;137(17):2863-74. Epub 2010 Jul 28. Copyright Published by The Company of Biologists 2010. This material is protected by a copyright retained by the authors. Permission granted by Dr. G Sheng. Comments The probe for Sizzled was amplified by PCR using the following primers:
Forward Primer: GTGCCACGAGATTGGGTACT
Reverse Primer: GAGTGAGCCCTGGGTAATGA
Base Pair Numbers: 162 - 690
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 4 stage 4
stage 4
Area Opaca
Entry 3 GEISHA Id Szl.Wittler.2008 Data Source Publication Complete cDNA Template Probe show GACAGCTCCCTGTTTGGCAAGCTGGGACTCACAGGGAGATGCTGTTGACTGCAAAAATACTTGTTTTCACTCTGAGTGT TTTCCTAGGAGTGGGCACAAGTTTTGACATTGGATTATCCACCAAATGTGTAGTGATACCCAAGGAGATGGACATGTGC CACGAGATTGGGTACTCCGAAATGAGGCTTCCCAACCTGATGGGACACACAAGCATGGCAGAGGTCGTCCTAAAATCCA CCACCTGGCAGCACCTGGTGCACACGGACTGTCACCCTCATGTGAGGATGTTCCTGTGCTCTCTGTTTGCACCCATCTG CCTGGACACGTTCATCCATCCCTGTAGGAGTATGTGCGTTGGTGTTCGGGACAGCTGCGCGCCTGTACTTGCCTGCCAT GGGCACACCTGGCCAGAAAGCCTGGACTGCAACCGGTTCCCTGCAGACGAGGACATGTGTCTGGCATCGCTTACAAAGG AATACAAATACTTGCACAAAGTCCTACCGAAGCCTGCATGCCAGACCTGCCCAGCAGTGGAGGAACTCTTCACGCACAA AAGACTTCTCGAAGTTTTCTGTGACAGTAATTTCGCAGTGAAAGTAAAGCTGTCCAAAAAAAGAGCAGTAATCGGCGAC CAAGAGTACAGCATTGAATGCCATGTGGAATTCATTACCCAGGGCTCACTCTTGCCTTATGAAACTCAGCACATGATAC AGCAATGGCTGCTCATCAATGAAAACTGTACACAGAGGATGACTCAAACCCATCGTCCTACGGTGTATCTCCTTGTAGG GAAGATTGAGGAGGGTATCATTTTAGTAAATCAGATTTATCACTGGCAGAGGAGGGACTCCCAGCTGACTTTGGCCACT CAGAAGTGGAGGTACC
Citation Wittler L, Saborowski M, Kessel M. Expression of the chick Sizzled gene in progenitors of the cardiac outflow tract. Gene Expr Patterns. 2008 Jul;8(6):471-6. Epub 2008 Feb 29. Copyright Copyright © 2008 Elsevier B.V. Comments The complete cDNA template sequence was obtained from the information from the publication as described in Wittler et al. 2008.
Entry 4 GEISHA Id LOC417741.Lee.2020 Data Source Publication Complete cDNA Template Probe show CACGGCAAGCTGGGACTCACAGGGAGATGCTGTTGACTGCAAAAATACTTGTTTTCACTCTGAGTGTTTTCCTAGGAGT GGGCACAAGTTTTGACATTGGATTATCCACCAAATGTGTAGTGATACCCAAGGAGATGGACATGTGCCACGAGATTGGG TACTCCGAAATGAGGCTTCCCAACCTGATGGGACACACAAGCATGGCAGAGGTCGTCCTAAAATCCACCACCTGGCAGC ACCTGGTGCACACGGACTGTCACCCTCATGTGAGGATGTTCCTGTGCTCTCTGTTTGCACCCATCTGCCTGGACACGTT CATCCATCCCTGTAGGAGTATGTGTGTNGGTGTTCGGGACAGCTGTGCGCCTATACTTGCCTGCCATGGGCACACCTGG CCAGAAAGTCTGGACTGCAACCGGTTCCCTGCAGACGAGGACATGTGTCTGGCATCGCTTACAAAGGAATACAAATACT TGCACAAAGTCCTACCGAAGCCTGCATGCCAGACCTGCCCAGCAGTGGAGGAACTCTTCACGCACAAAAGACTTCTCGA AGTTTTCTGTGACAGTAATTTCGCAGTGAAAGTAAAGCTGTCCAAAAAAAGAGCAGTAATCGGCGACCAAGAGTACAGC ATTGAGTGCCATGTGGAATTCATTACCCAGGGCTCACTCTTGCCTTATGAAAACTCAGCACATGATAACAGCAAATGGC TGCTCATCAATGAAAAACTGTACACAGAGGATTGACTCAATACCCATCGTCCTACCGGGTATCTCCTTGTAGGGAAC
Citation Hyung Chul Lee, Hui-Chun Lu, Mark Turmaine, Nidia M. M. Oliveira, Youwen Yang† , Irene De Almeida and Claudio D. Stern. Molecular anatomy of the pre-primitive streak chick embryo Open Biol. null. 10.1098/rsob.190299. Copyright Copyright © 2020 The Authors. Comments The complete cDNA template sequence was obtained from the information provided in the publication as described in Lee et al. 2020. The probe was synthesized from cDNA clone ChEST714o24.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) X-XIV stage X
stage XII
stage XII
stage XII
stage XIV
Hypoblast all
Entry 5 GEISHA Id LOC417741.Anderson.2019 Data Source Publication Complete cDNA Template Probe show CACGGCAAGCTGGGACTCACAGGGAGATGCTGTTGACTGCAAAAATACTTGTTTTCACTCTGAGTGTTTTCCTAGGAGT GGGCACAAGTTTTGACATTGGATTATCCACCAAATGTGTAGTGATACCCAAGGAGATGGACATGTGCCACGAGATTGGG TACTCCGAAATGAGGCTTCCCAACCTGATGGGACACACAAGCATGGCAGAGGTCGTCCTAAAATCCACCACCTGGCAGC ACCTGGTGCACACGGACTGTCACCCTCATGTGAGGATGTTCCTGTGCTCTCTGTTTGCACCCATCTGCCTGGACACGTT CATCCATCCCTGTAGGAGTATGTGTGTNGGTGTTCGGGACAGCTGTGCGCCTATACTTGCCTGCCATGGGCACACCTGG CCAGAAAGTCTGGACTGCAACCGGTTCCCTGCAGACGAGGACATGTGTCTGGCATCGCTTACAAAGGAATACAAATACT TGCACAAAGTCCTACCGAAGCCTGCATGCCAGACCTGCCCAGCAGTGGAGGAACTCTTCACGCACAAAAGACTTCTCGA AGTTTTCTGTGACAGTAATTTCGCAGTGAAAGTAAAGCTGTCCAAAAAAAGAGCAGTAATCGGCGACCAAGAGTACAGC ATTGAGTGCCATGTGGAATTCATTACCCAGGGCTCACTCTTGCCTTATGAAAACTCAGCACATGATAACAGCAAATGGC TGCTCATCAATGAAAAACTGTACACAGAGGATTGACTCAATACCCATCGTCCTACCGGGTATCTCCTTGTAGGGAAC
Citation Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5. Copyright Copyright © 2019 Elsevier Inc. All rights reserved. Comments The complete cDNA template sequence was obtained from the information from the publication as described in Anderson et al. 2019.
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 7-12 stage 12
stage 12
Heart
Mouse Frog Fruit Fly Zebra Finch Zebrafish