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Chicken Stage Series
CTNNA2
catenin alpha 2
Gene Summary
Expression
Other Species Expression
JBrowse
Gene
Official Symbol
CTNNA2
Official Full Name
catenin alpha 2
CGNC ID
49620
also known as
catenin alpha-2|alpha N-catenin|catenin (cadherin-associated protein), alpha 2|neural alpha-catenin
gene type
protein-coding
Genomic Map
Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNA
NM_205136
Polypeptide
NP_990467
Gene Expression
In Situ Hybridization
GEISHA
Orthology
Entrez Gene
Ensembl Gene
Genetic Phenotypes
MOD
Fruit Fly
40517
FBgn0010215
Human
1496
ENSG00000066032
MIM:114025
Mouse
12386
ENSMUSG00000063063
All phenotypic alleles (
3
):Spontaneous(
1
) Targeted, knock-out(
2
)
MGI:88275
Xenopus
100037860
,
444710
5955200
Zebrafish
567500
ENSDARG00000024785
ZDB-GENE-060815-3
ZFIN:ZDB-GENE-060815-3
Gene Ontology
Molecular Function
cadherin binding
,
protein binding
,
structural molecule activity
Biological Process
axonogenesis
,
brain morphogenesis
,
cell-cell adhesion
,
dendrite morphogenesis
,
more...
epithelial cell differentiation
,
regulation of synapse structural plasticity
Cellular Component
actin cytoskeleton
,
adherens junction
,
axon
,
cytoplasm
,
plasma membrane
Links to other databases
Entrez Gene
396035
Ensembl Gene
KEGG
gga:396035
GEISHA Id
aNCATENIN.Jhingory.2010
Data Source
Publication
Complete cDNA Template Probe
show
GGGAGTCGTGCTGCACACCCAGCCCGTAAGTAAACGCCGCTGCTGGAGAGGAGGAGGAGGAGGAGAAGGAGGCGGCGGC
GGCGGCGAGAGGTTCTCCCACCCCCACCCACCGAGCTGAGGGAGTATGACTTCTGCAACGTCACCTATCATTTTGAAAT
GGGACCCCAAAAGTTTGGAAATCAGGACTCTCACAGTAGAGAGGCTACTGGAGCCACTCGTTACTCAGGTAACAACACT
CGTTAACACAAGCAACAAGGGACCATCTGGCAAGAAGAAAGGGCGCTCCAAGAAGGCCCATGTGTTGGCTGCCTCCGTA
GAGCAGGCTACTCAAAACTTTTTAGAGAAAGGAGATCAAATTGCTAAAGAGAGCCAGGATCTGAAGGAGGAACTGGTTG
CTGCTGTGGAGGATGTACGCAAACAAGGAGAAACAATGAGAATTGCCTCTTCAGAGTTTGCAGACGACCCATGCTCCTC
AGTGAAGCGGGGCACGATGGTGAGGGCTGCTCGTGCCTTGCTTTCTGCTGTTACCCGCTTGCTCATCCTGGCTGATATG
GCGGACGTCATGAGGCTTCTTTCACATCTGAAAATTGTAGAGGAAGCACTAGAAGCAGTGAAAAATGCAACAAATGAAC
AAGATTTAGCAAATCGCTTCAAAGAATTTGGAAAAGAGATGGTGAAACTGAATTATGTAGCTGCACGGCGACAGCAGGA
GCTGAAAGATCCTCACTGCAGGGATGAAATGGCTGCAGCTCGAGGTGCTCTGAAGAAGAATGCCACAATGTTGTATACT
GCATCCCAAGCATTTCTTCGTCACCCTGATGTTGCAGCTACTAGGGCCAACAGAGACTATGTCTTCAAGCAAGTTCAAG
AAGCAATTGCTGGTATTTCCAACGCTGCCCAGGCCACCTCACCCACTGATGAAAACAAGGGGCATACTGGCATTGGAGA
GCTTGCTGCTGCACTAAATGAATTTGATAACAAAATCATCTTAGACCCCATGACGTTCAGCGAGGCCCGCTTCAGGCCC
TCTCTGGAGGAGAGGCTGGAGAGCATTATCAGTGGGGCAGCGCTGATGGCAGACTCCTCGTGCACGCGGGATGACCGCA
GGAAGCGCATCGTAGCTGAGTGCAAACGCGCTGTGCGGCAGGCACTGCAGGACCTGCTCAGCGAGTACATGAACAATAC
TGGAAGGAAAGAGAAGGGGGACCCACTCAACATTGCTATTGACAAGATGACCAAGAAAACACGAGACCTTCGAAGACAG
CTCCGGAAGGCAGTAATGGATCATATATCAGATTCGTTCCTGGAGACCAATGTGCCATTGCTGGTTCTCATCGAGGCTG
CCAAAAGCGGTAATGAGAAAGAAGTGAAGGAGTACGCGCAGGTCTTCCGTGAGCATGCCAACAAGCTCGTTGAGGTTGC
AAATCTGGCCTGTTCCATCTCAAATAATGAAGAAGGTGTGAAGCTAGTGCGTATGGCAGCAACACAGATTGATAGTCTG
TGCCCCCAGGTAATAAATGCTGCGCTGACGTTGGCTGCCAGACCTCAGAGCAAAGTAGCACAGGACAACATGGATGTCT
TTAAGGATCAGTGGGAGAAACAAGTGCGAGTTCTCACTGAAGCAGTTGATGACATCACTTCAGTGGATGATTTCCTCTC
TGTTTCAGAAAATCATATTCTGGAAGATGTGAACAAATGTGTGATTGCTCTCCAAGAGGGAGATGTCGATACCCTGGAT
AGAACTGCTGGGGCCATCCGAGGCCGTGCAGCCAGAGTCATTCACATCATTAATGCAGAGATGGAAAACTATGAAACTG
GAGTTTATACCGAGAAGGTACTGGAAGCAACCAAACTGCTCTCTGAAACAGTTATGCCACGTTTTGCTGAACAAGTTGA
GGTTGCCATTGAAGCGTTGAGTGCGAATGTCCCACAGCCATTTGAAGAGAATGAGTTCATAGATGCCTCCCGCTTGGTT
TATGATGGAGTTCGTGACATCAGGAAAGCTGTTCTGATGATAAGGACCCCTGAAGAGCTGGAGGATGATTCAGACTTTG
AGCAGGAAGATTATGATGTTCGCAGCCGAACAAGTGTTCAGACTGAAGATGACCAGCTTATTGCTGGCCAGAGTGCAAG
GGCTATCATGGCTCAGCTCCCCCAGGAGGAAAAGGCTAAGATTGCTGAGCAGGTAGAGATATTCCACCAAGAAAAGAGC
AAACTGGATGCAGAGGTAGCCAAGTGGGATGACAGCGGTAATGACATCATTGTGTTGGCAAAACAGATGTGCATGATTA
TGATGGAAATGACAGACTTCACTAGAGGTAAAGGCCCACTGAAGAATACATCTGATGTCATTAATGCAGCCAAGAAGAT
TGCAGAGGCAGGATCAAGGATGGACAAACTTGCACGGGCAGTAGCTGATCAGTGCCCTGACTCAGCCTGCAAACAGGAC
CTGCTAGCCTACCTACAGCGCATTGCCCTCTACTGCCACCAGCTCAACATCTGCAGCAAAGTCAAGGCAGAAGTTCAGA
ACCTGGGAGGAGAACTTATTGTATCAGGGCTGGACAGTGCCACTTCACTCATCCAGGCAGCTAAAAATCTGATGAACGC
TGTGGTCCTTACAGTGAAGGCATCATATGTAGCTTCTACTAAGTATCAGAAGGTCTATGGTACTGCTGCAGTGAACTCC
CCAGTTGTATCTTGGAAGATGAAGGCACCTGAGAAGAAACCTCTAGTAAAGAGAGAAAAACCAGAAGAATATCAGACAA
GAGTGAGAAGAGGGTCCCAGAAGAAACATATTTCCCCTGTACAGGCCTTAAGTGAATTTAAAGCTATGGATTCATTCTA
AAACACTAAGCTTTACCAGCAGGGTTTTATATTCTTTTTGTATGCATACCTGCCGACTTGTATGCGTCTGGCATGGGGT
GGGGGGGAAGCAGTGTCAATTTGCATGTGACCTGAAGCTCTATTGAAGTAACTACTTTCTGCAATGCCAAAATTTAAGG
GCGTTCTCTTCCAATGTTCAGTGGACTTGGTCCAAGCTTACTTTTTAAACTAAACTATTGCATTAAATTGGCCAAAGAA
TTTGCATCACAGGAGTATTTGCTTGGGTTAAATAATGAATTC
Citation
Jhingory S, Wu CY, Taneyhill LA. Novel insight into the function and regulation of αN-catenin by Snail2 during chick neural crest cell migration. Dev Biol. 2010 August 15; 344(2): 896910.
Copyright
Copyright © 2010 Published by Elsevier Inc
Comments
As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_205136.1). 5-CGTTGCAGAAGTCATACTCCCTCA-3 was "designed to target the aN-Catenin"
Stage
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Comments (click to highlight)
7-9
stage 8
stage 8
stage 8
stage 8
stage 9
stage 9
stage 9
stage 9
stage 9
stage 9
Neural Plate/Tube
HH 8+
HH stage 8+
HH stage 9- (6ss)
Mouse
Emage
MGI:88275
MGI GXD
MGI:88275
Frog
Xenbase
5955200
Fruit Fly
BDGP
FBgn0010215
Zebra Finch
ZEBrA
Zebrafish
ZFIN
ZDB-GENE-060815-3
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