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Chicken Stage Series
COL26A1
collagen type XXVI alpha 1 chain
Gene Summary
Expression
Other Species Expression
JBrowse
Gene
Official Symbol
COL26A1
Official Full Name
collagen type XXVI alpha 1 chain
CGNC ID
1229
also known as
EMID2, collagen alpha-1(XXVI) chain|EMI domain containing 2|collagen, type XXVI, alpha 1
gene type
protein-coding
Genomic Map
Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNA
XM_415753
Polypeptide
XP_415753
Gene Expression
In Situ Hybridization
GEISHA
Orthology
Entrez Gene
Ensembl Gene
Genetic Phenotypes
MOD
Fruit Fly
Human
136227
ENSG00000160963
MIM:608927
Mouse
140709
ENSMUSG00000004415
All phenotypic alleles (
1
):Targeted, other(
1
)
MGI:2155345
Xenopus
Zebrafish
ZDB-GENE-130530-864
ZFIN:ZDB-GENE-130530-864
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene
417504
Ensembl Gene
KEGG
gga:417504
GEISHA Id
COL26A1.Singh.2016
Data Source
Publication
Complete cDNA Template Probe
show
CTCCAACCACGTTCCCCATCTTAGGCAGGATACTAAGATTCATTTAGCCAGGGCATCTACGCATCTTGCCATGTCTGTG
TAACTTAGAGAGTGGATTTATTTGGATGCGTGCTCATTTAGAAATATATTCTAATTGAAATGTTTAGTGCTTTATCTTA
CCTGCATACTGTGCAATACCATAGTGTGTTCTTTTCCTTTTCTTCCTAAGACTTCTTTGTAATTCTTCATGTTTCTTTG
AACGCCAGCGTGTTCTTAACTTGGATCAGTTCTGGTGGTAGAAATGCATTTTCCTTGCCCTGAGCTAACCAGAAGCACA
TTGCACAACTGAAAATCTTTGCAACTTGTGCACCCTGACGTTCACCAGCAATCTGGTACTCCTGGGAGGGGGAGAATGC
TTCTCTCCAGAGTATCCAATTTGCACTTACTGTAAAGAATTGATAGCAACCTGGGGAAAAAAGAATTAATGAGAGAGAA
GAACCCTCGTCTGCTCCCACCAGACTCCACAGTAATTTTGCCATCACCTTCCATAGGAACAGGGACAGACCATAACAAG
CAGATCCAAGTCTCCAGCTCACAGGAACTGGTGCTGCTTGCAGTGGAGCAGAGCACATGGCTCACATGTGGCTTTCTGA
AAGTTTGGCTCTGGGGTTCAGTTTCAATCCCAGTCTCTGCAATGAACTGTTTCAATGTAATGAACCTGACCACTGTGAC
AAAGGCTTCCAAAAGACAATCAGCTTCTGGAATTACTTGTTAGTACAATATATTGGAAATTCTTTCTCTTCCATGTTTA
CAGCTTCTGCTTGAGATTACATTCCATGCTTGGTGGTATAGGGGTTAAACTACTTGCAGTTTCCATGATTGCTTTGAAA
CCAGGCAATTCAAAGGTGCTATAACTGTCCACAGCGCACATTCCCACCCGTAGAAGGAAATGTTAACTTTTTCACTACT
TATTTTACACAGTATCTTTTTATTTATATCGGTGTGTTTTGTATGTGTGCAAATGGTCCCATTGTAATAAGCTATACAA
CATTTGGTCTTTAATAGGGCGGCCACAGGCAGTATTTTGCAGTCGTGTAGTTTCTTAACTTAGATCACGAATAAATAAC
CTCTTGTGACACGAGTTAATTTATGGCAGGCTCTAATGTTTGTTGTAAACACAACCTGTCTGTTCCACCTCTTGCATGG
TTACTTACCTGTTTTCATATCGCTATGTTATTGTTCAAGATACCTATTTCTCTTTATTTGCTATGGGTTTTGTTACTGT
ATATGGAATGTTTTGTATTCAGCATTTTCGTACAGAGCAGAGTGGGAACAGTATTCAAGAACCCACAAATACCAAAGAC
CTTTCATGTAATGCACTGACAAATAAACATACTGTAAATG
Citation
Singh PN, Ray A, Azad K, Bandyopadhyay A. A comprehensive mRNA expression analysis of developing chicken articular cartilage. Gene Expr Patterns. 2016 Jan;20(1):22-31.
Copyright
Copyright © 2015 Elsevier B.V. All rights reserved.
Comments
The complete cDNA template sequence was obtained from the information provided in the publication as described in Singh et al. 2016. The probe was synthesized from cDNA clone ChEST302p20.
Stage
Image (click image to view full size)
Location (click to highlight)
Comments (click to highlight)
25-30
stage 28
Limb Buds
31-38
stage 31
stage 34
stage 36
stage 38
Limb Buds
all
Mouse
Emage
MGI:2155345
MGI GXD
MGI:2155345
Frog
Xenbase
Fruit Fly
BDGP
Zebra Finch
ZEBrA
Zebrafish
ZFIN
ZDB-GENE-130530-864
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