GEISHA 2.0

NCBI Nucleotide Hit

Ensembl Genome Map contig view

5' Sequence

Stage

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7-12

stage 10

stage 12

Ear/Otic Placcode

Head Mesenchyme

13-18

stage 13

stage 14

stage 15

stage 16

stage 17

stage 18

19-24

stage 19

stage 20

stage 23

enteric ganglia; hand transected

stage 25

transected

view from top of head

Probe 2

GEISHA Id pgp1n.pk012.c24

NCBI Ensembl

Gene Name SOX10 SOX10_CHICK

Aliases SOX-10, Sry-boxntranscription factor, SOX-10

Gene Description SRY (sex determining region Y)-box 10 Transcription factor SOX-10 (cSOX10). [Source:Uniprot/SWISSPROT;Acc:Q9W757]

Gene Ontology

NCBI Nucleotide Hit

Ensembl Genome Map contig view

5' Sequence

Stage

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7-12

stage 12

13-18

stage 16

stage 17

Cranial Ganglia

Ear/Otic Placcode

19-24

stage 21

Amnion

Ear/Otic Placcode

stage 25

Probe 3

GEISHA Id Sox10.Barembaum.2007

NCBI Ensembl

Gene Name SOX10 SOX10_CHICK

Aliases SOX-10, Sry-boxntranscription factor, SOX-10

Gene Description SRY (sex determining region Y)-box 10 Transcription factor SOX-10 (cSOX10). [Source:Uniprot/SWISSPROT;Acc:Q9W757]

Gene Ontology

NCBI Nucleotide Hit

Ensembl Genome Map contig view

Citation Barembaum M, Bronner-Fraser M. Spalt4 mediates invagination and otic placode gene expression in cranial ectoderm. Development. 2007 Nov;134(21):3805-14.

Comments According to the authors, "The Sox10 expression construct was described previously (McKeown et al., 2005)." As information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (NM_204792).

Complete Sequence

ATTAGTAAAAACCAAGCCTCCCTCCAGGAATGGCACTTGCCTGAGCACCTCCCCGGCAGCACGCCCCACAGCCGGAGGG AGAACAGGGGGGCACTGGGACAGGAGCTGCAGCCTTCACAGGGTTTGCTGCCCGCACCAGCCAGCAATTGAGAAGAAGG AAGTCACCATGGCTGATGACCAAGATCTGTCGGAGGTGGAGATGAGCCCAGTGGGTTCTGAAGACCACCACTGCCTCTC GCCGGGACCATCCATGGCATCGGACAACTCTTCGCACCTCGCCAGCTCTGGGAATGGAGAGATGGGCAAGGTCAAGAAG GAGCAGCAAGACTCGGAGGCGGATGACGATAAGTTCCCTGTCTGCATCCGTGAAGCGGTCAGCCAGGTGCTGAGCGGCT ATGACTGGACCCTGGTACCCATGCCTGTTCGGGTCAATGGAAGTAACAAGAGCAAACCCCACGTCAAGAGGCCCATGAA CGCCTTCATGGTCTGGGCGCAGGCTGCCCGGAGGAAATTGGCTGACCAGTACCCGCACCTCCACAATGCTGAGCTCAGT AAGACCTTGGGGAAGCTCTGGAGGCTGCTGAATGAAAGTGATAAGCGTCCCTTTATTGAAGAGGCAGAGCGGCTGAGGA TGCAGCACAAGAAGGACCACCCCGACTACAAGTACCAGCCACGGAGGCGGAAAAATGGCAAGGCCACGCAGGGCGAGGG CGAGGGCCAGGTGGAGGGGGAGGCTGGCGGGGCTGCCTCTATCCAGGCTCACTACAAGAATGCCCACCTGGACCACAGG CATCCTGGGGAAGGGTCACCCATGTCCGATGGGCACCCGGAGCACTCTTCAGGTCAGAGCCACGGCCCTCCCACTCCTC CCACCACCCCTAAGACTGAGCTGCAGGCAGGCAAAGCTGACTCCAAGCGAGAAGGGCGTTCCCTTGGGGAAGGGGGAAA GCCCCACATTGACTTTGGCAATGTGGACATCGGGGAGATCAGCCATGAAGTGATGTCCAACATGGAGACCTTTGACGTC AACGAATTTGACCAATACCTGCCACCCAACGGACACGCCGGCCACCCAGGCCATGTTGGGGGCTACGCCGCGGCCGCTG GCTATGGCCTTGGGAGCGCCCTGGCTGCGGCCAGTGGACACTCAGCCTGGATCTCCAAGCAGCATGGAGTCTCCTTGTC CGCCACCACGTCACCGGTGGTGGACTCCAAAGCCCAGGTGAAAACAGAGGGGTCTGCCCCTGGAGGTCATTACACCGAT CAGCCCTCCACCTCCCAGATAGCTTACACATCCCTGAGTCTGCCCCACTATGGTTCGGCCTTCCCATCCATCTCCAGGC CTCAGTTTGACTATCCAGACCACCAGCCCTCGGGACCCTACTACAGCCACTCCAGCCAAGCCTCTGGCCTCTACTCTGC CTTCTCCTATATGGGACCTTCCCAGCGTCCTCTTTACACTGCCATCTCTGACCCCGCACCCTCCGTGCCACAGTCCCAT AGTCCCACACATTGGGAACAGCCTGTGTATACGACTCTCTCCAGACCATAGGGAATGGGGAACAGTGACCAAAGCAGCG ACGGAAAGGCTCCGAAGAATCTGCACAGGCAGAAGAGCCTCCGAACTCCGAGGTCACTCAGTGCCACCATCCAGCCACC AGCACCCACTGAGTATCTGGAAGTGCCTTTCTTGACCCCGGCTATCGTTGGCTCACCCGCCTACAGAAAGGTTTTTCGT CCTTTCGCCCTGTACCGATTTCACGCAGGCCACACAACTGGCTTGCAACACCTTATTGGCCTTCTAGATGAGGAAGACT CAAGACATGGAGTGACGGGTCCATGGTGGGCTTCGTTGTGCGCACCCTGGACTGTAAGAGGAGAGAGACTGTCCTTTCC TTCCCCTCCCCAACCTCCTCCAGAGAATTAGCAAGTGTTTCCAAAAGGCCACCATGGCCAACTCTTTGTCAGCTGCTGC GGGTGAAGGGTGCTTGCTCAGCCTTGGTGAACATGTCATGGGAGGAGGAGTTGGGAGGACGGCATGGCCGGCTTCCTTG CGTCAGTGTTGTGCAGCAGTCCTGCCTAAGATTCACACATGCATGAATCTTGATCCCTGCTGGAAGACCAACTTATGCT TGCTTCCTTGCTGATTTTCACAGCTGCACGCTATAGCTTTTCTCCCCGCCTCTTCCCCCTGTCCCATCTGTTTAATCCC ACACCCCTTCCTGCATGGATTTTATAAGGCTTGACTGAACAATGTGGAGGATTCAGGAACTGCACTGTCAGCCTTAGCC TTTCTCATTTCATAGCCCGTATGTGTGCATGCGTATTTGTGTAAGGAGTTGAAGAGAGGTGGGGAAGGATCTGTGGATC ATTCAGGTGCCGTGGGTGAATCCTCTCCTCTTACCATTTAATTTCTGCCGTTCACTTGTGTCTCAGATTTCTGGCATCT CAGTCCTTCCCAATCTCTTCAGTATCCCAACAATCTCGCAGCAGACCAGGTCCTTGCTCCTCCAGCATTTGACTGTGTC TGCTGAAAACGTGAAGGCACCAAGAAAGCTACCATGCACTTGCCAACACCCAGATGTGGTTCCAATATTCCAATACTCA CTTTGAACCCTGCTCCAAACTCAGGCCGATGGGGTGTACATCACTGCTCGTTTGTTCATCACATTATCGCCATCTTCAG CACCTCCCTCCTACTTTCACTCAGGATGGAAAGATACTCTCGTGGATATAAGCAAGGTAGATATGCACCCAATATTGGA TGACTACAAAGAAAAGAACACTGCTTACGTGCAGAAGAACTCATTTTCACCTCTGGGTTTCAAGCTGGAAAGAAGCAGC TCTTGCAGTCAGATCAACCCCTTTTGTTCAGCCCATCTCCTGAGGACTACTTAATTCTCCTTTGTCACCTCCAGGACTG GGTGGCGTGCCCTGCCAGGGAGTGAACTGGCCAAGAAGCTGCTGCAGGAAAAAGTGACTCCTGACAACTGATCAGAGAG ATGTGTTGTGGGACCTTCTAACGGGTAATTCAGTCTAGAAAGATAAAATACTTCGACTGAACGTGGACTGTGATTCGTG TCACTGTTTCCCTCTGTTGATATGATGTCAGATGCCCTTCCCACCTCCCTTAGCTATGGATGACTTCTCCTCGTGGTGT CTGAAGAGATCACGTAGAATGTTTGTTCCCTGTACGCATGTAACCTATTTGAGCCCTGTCCTCTTATTTAAGGCAAGTA GCACATTCCTTCCCCTGCTCCCTTTCCCCAGTCTCTATGCTGTCCTAGCACCATTAACTCTGCATTAAACATATGGAAT AATAAACTTAAAAAAAAAAAAAAAAAAA

Stage

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13-14

stage 14

Probe 4

GEISHA Id Sox10.Burns.2005

NCBI Ensembl

Gene Name SOX10 SOX10_CHICK

Aliases SOX-10, Sry-boxntranscription factor, SOX-10

Gene Description SRY (sex determining region Y)-box 10 Transcription factor SOX-10 (cSOX10). [Source:Uniprot/SWISSPROT;Acc:Q9W757]

Gene Ontology

NCBI Nucleotide Hit

Ensembl Genome Map contig view

Citation Burns AJ, Delalande JM (2005). Neural crest cell origin for intrinsic ganglia of the developing chicken lung. Dev Biol. 2005 Jan 1;277(1):63-79.

Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204792).

Complete Sequence

presumptive myenteric plexus

Stage

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Comments (click to highlight)

25-30

stage 26

stage 30

31-35

stage 35

Foregut

Lung

foregut enteric ganglia

lung bud ganglia

Probe 5

GEISHA Id Sox10.McKeown.2005

NCBI Ensembl

Gene Name SOX10 SOX10_CHICK

Aliases SOX-10, Sry-boxntranscription factor, SOX-10

Gene Description SRY (sex determining region Y)-box 10 Transcription factor SOX-10 (cSOX10). [Source:Uniprot/SWISSPROT;Acc:Q9W757]

Gene Ontology

NCBI Nucleotide Hit

Ensembl Genome Map contig view

Citation McKeown S, Lee V, Bronner-Fraser M, Newgreen D, Farlie P. Sox10 Overexpression Induces Neural Crest-Like Cells From All Dorsoventral Levels of the Neural Tube but Inhibits Differentiation. Dev Dyn. 2005 Jun;233(2):430-44.

Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # AF152356).

Complete Sequence

AATTCGGCACGAGAGCCGGGGCATTAGTAAAAACCAAGCCTCCCTCCAGGAATGGCACTTGCCTGAGCACCTCCCCGGC AGCACGCCCCACAGCCGGAGGGAGAACAGGGGGGCACTGGGACAGGAGCTGCAGCCTTCACAGGGTTTGCTGCCCGCAC CAGCCAGCAATTGAGAAGAAGGAAGTCACCATGGCTGATGACCAAGATCTGTCGGAGGTGGAGATGAGCCCAGTGGGTT CTGAAGACCACCACTGCCTCTCGCCGGGACCATCCATGGCATCGGACAACTCTTCGCACCTCGCCAGCTCTGGGAATGG AGAGATGGGCAAGGTCAAGAAGGAGCAGCAAGACTCGGAGGCGGATGACGATAAGTTCCCTGTCTGCATCCGTGAAGCG GTCAGCCAGGTGCTGAGCGGCTATGACTGGACCCTGGTACCCATGCCTGTTCGGGTCAATGGAAGTAACAAGAGCAAAC CCCACGTCAAGAGGCCCATGAACGCCTTCATGGTCTGGGCGCAGGCTGCCCGGAGGAAATTGGCTGACCAGTACCCGCA CCTCCACAATGCTGAGCTCAGTAAGACCTTGGGGAAGCTCTGGAGGCTGCTGAATGAAAGTGATAAGCGTCCCTTTATT GAAGAGGCAGAGCGGCTGAGGATGCAGCACAAGAAGGACCACCCCGACTACAAGTACCAGCCACGGAGGCGGAAAAATG GCAAGGCCACCCAGGGCGAGGGCGAGGGCCAGGTGGAGGGGGAGGCTGGCGGGGCTGCCTCTATCCAGGCTCACTACAA GAATGCCCACCTGGACCACAGGCATCCTGGGGAAGGGTCACCCATGTCCGATGGGCACCCGGAGCACTCTTCAGGTCAG AGCCACGGCCCTCCCACTCCTCCCACCACCCCTAAGACCGAGCTGCAGGCAGGCAAAGCTGACTCCAAGCGAGAAGGGC GTTCCCTTGGGGAAGGGGGAAAGCCACACATTGACTTTGGCAATGTGGACATCGGGGAGATCAGCCATGAAGTGATGTC CAACATGGAGACCTTTGACGTCAACGAATTTGACCAATACCTGCCACCCAACGGACACGCCGGCCACCCAGGCCATGTT GGGGGCTACGCCGCGGCCGCTGGCTATGGCCTTGGGAGCGCCCTGGCTGCGGCCAGTGGACACTCAGCCTGGATCTCCA AGCAGCATGGAGTCTCCTTGTCCGCCACCACGTCACCGGTGGTGGACTCCAAAGCCCAGGTGAAAACAGAGGGGTCTGC CCCTGGAGGTCATTACACCGATCAGCCCTCCACCTCCCAGATAGCTTACACATCCCTGAGTCTGCCCCACTATGGTTCG GCCTTCCCGTCCATCTCCAGGCCTCAGTTTGACTATCCAGACCACCAGCCCTCGGGACCCTACTACAGCCACTCCAGCC AAGCCTCTGGCCTCTACTCTGCCTTCTCCTATATGGGACCTTCCCAGCGTCCTCTTTACACTGCCATCTCTGACCCCGC ACCCTCCGTGCCACAGTCCCATAGTCCCACACATTGGGAACAGCCTGTGTATACGACTCTCTCCAGACCATAGGGAATG GGGAACAGTGACCAAAGCAGCGACGGAAAGGCTCCGAAGAATCTGCACAGGCAGAAGAGCCTCCGAACTCCGAGGTCAC TCAGTGCCACCATCCAGCCACCAGCACCCACTGAGTATCTGGAAGTGCCTTTCTTGACCCCGGCTATCGTTGGCTCACC CGCCTACAGAAAGGTTTTTCGTCCTTTCGCCCTGTACCGATTTCACGCAGGCCACACAACTGGCTTGCAACACCTTATT GGCCTTCTAGATGAGGAAAGACTCAAGACATGGAGTGACGGGTCCATGGTGGGCTTCGTTGTGCGCACCCTGGACCGTA AGAGGAGAGAGACTGTCCTTTCCTTCCCCTCCCCAACCTCCTCCAGAGAATTAGCAAGTGTTTCCAAAAGGCCACCACG GCCAACTCTTTGTCAGCTGCTGCGGGTGAAGGGTGCTTGCTCAGCCTTGGTGAACATGTCATGGGAGGAGGAGTTGGGA GGACGGCATGGCCGGCTTCCTTGCGTCAGTGTTGTGCAGCAGTCCTGCCTAAGATTCACACATGCATGAATCTTGATCC CTGCTGGAAGACCAACTTATGCTTGCTTCCTTGCTGATCTCGTGCCGAATT

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 10

13-18

stage 18

Probe 6

GEISHA Id	Sox10.Richman.2002
	NCBI	Ensembl
Gene Name		SOX10_CHICK
Gene Description		Transcription factor SOX-10 (cSOX10). [Source:Uniprot/SWISSPROT;Acc:Q9W757]
Gene Ontology		show GO:0001701 in utero embryonic development IEA GO:0003677 DNA binding IEA GO:0003682 chromatin binding IEA GO:0003705 RNA polymerase II transcription factor activity, enhancer binding IEA GO:0005515 protein binding IEA GO:0005634 nucleus IEA GO:0006350 transcription IEA GO:0006355 regulation of transcription, DNA-dependent IEA GO:0007422 peripheral nervous system development IEA GO:0030154 cell differentiation IEA GO:0030318 melanocyte differentiation IEA GO:0042802 identical protein binding IEA GO:0045944 positive regulation of transcription from RNA polymerase II promoter IEA GO:0048469 cell maturation IEA GO:0048484 enteric nervous system development IEA GO:0048589 developmental growth IEA GO:0048709 oligodendrocyte differentiation IEA
Ensembl Genome Map	contig view
Citation	Richman JM, Fu KK, Cox LL, Sibbons JP, Cox TC. Isolation and characterisation of the chick orthologue of the Opitz syndrome gene, Mid1, supports a conserved role in vertebrate development. Int J Dev Biol. 2002;46(4):441-8.
Copyright	"Reprinted from Int. J. Dev. Biol., 46, Richman JM, Fu KK, Cox LL, Sibbons JP, Cox TC, Isolation and characterisation of the chick orthologue of the Opitz syndrome gene, Mid1, supports a conserved role in vertebrate development, 441-8 , Copyright (2002), with permission from Copyright © 2002 UBC Press". All rights reserved.
Comments	Chicken Sox10 was generously provided by P. Scotting (Cheng et al., 2000). NCBI accession number: NM_204792
Complete Sequence	show ATTAGTAAAAACCAAGCCTCCCTCCAGGAATGGCACTTGCCTGAGCACCTCCCCGGCAGCACGCCCCACAGCCGGAGGG AGAACAGGGGGGCACTGGGACAGGAGCTGCAGCCTTCACAGGGTTTGCTGCCCGCACCAGCCAGCAATTGAGAAGAAGG AAGTCACCATGGCTGATGACCAAGATCTGTCGGAGGTGGAGATGAGCCCAGTGGGTTCTGAAGACCACCACTGCCTCTC GCCGGGACCATCCATGGCATCGGACAACTCTTCGCACCTCGCCAGCTCTGGGAATGGAGAGATGGGCAAGGTCAAGAAG GAGCAGCAAGACTCGGAGGCGGATGACGATAAGTTCCCTGTCTGCATCCGTGAAGCGGTCAGCCAGGTGCTGAGCGGCT ATGACTGGACCCTGGTACCCATGCCTGTTCGGGTCAATGGAAGTAACAAGAGCAAACCCCACGTCAAGAGGCCCATGAA CGCCTTCATGGTCTGGGCGCAGGCTGCCCGGAGGAAATTGGCTGACCAGTACCCGCACCTCCACAATGCTGAGCTCAGT AAGACCTTGGGGAAGCTCTGGAGGCTGCTGAATGAAAGTGATAAGCGTCCCTTTATTGAAGAGGCAGAGCGGCTGAGGA TGCAGCACAAGAAGGACCACCCCGACTACAAGTACCAGCCACGGAGGCGGAAAAATGGCAAGGCCACGCAGGGCGAGGG CGAGGGCCAGGTGGAGGGGGAGGCTGGCGGGGCTGCCTCTATCCAGGCTCACTACAAGAATGCCCACCTGGACCACAGG CATCCTGGGGAAGGGTCACCCATGTCCGATGGGCACCCGGAGCACTCTTCAGGTCAGAGCCACGGCCCTCCCACTCCTC CCACCACCCCTAAGACTGAGCTGCAGGCAGGCAAAGCTGACTCCAAGCGAGAAGGGCGTTCCCTTGGGGAAGGGGGAAA GCCCCACATTGACTTTGGCAATGTGGACATCGGGGAGATCAGCCATGAAGTGATGTCCAACATGGAGACCTTTGACGTC AACGAATTTGACCAATACCTGCCACCCAACGGACACGCCGGCCACCCAGGCCATGTTGGGGGCTACGCCGCGGCCGCTG GCTATGGCCTTGGGAGCGCCCTGGCTGCGGCCAGTGGACACTCAGCCTGGATCTCCAAGCAGCATGGAGTCTCCTTGTC CGCCACCACGTCACCGGTGGTGGACTCCAAAGCCCAGGTGAAAACAGAGGGGTCTGCCCCTGGAGGTCATTACACCGAT CAGCCCTCCACCTCCCAGATAGCTTACACATCCCTGAGTCTGCCCCACTATGGTTCGGCCTTCCCATCCATCTCCAGGC CTCAGTTTGACTATCCAGACCACCAGCCCTCGGGACCCTACTACAGCCACTCCAGCCAAGCCTCTGGCCTCTACTCTGC CTTCTCCTATATGGGACCTTCCCAGCGTCCTCTTTACACTGCCATCTCTGACCCCGCACCCTCCGTGCCACAGTCCCAT AGTCCCACACATTGGGAACAGCCTGTGTATACGACTCTCTCCAGACCATAGGGAATGGGGAACAGTGACCAAAGCAGCG ACGGAAAGGCTCCGAAGAATCTGCACAGGCAGAAGAGCCTCCGAACTCCGAGGTCACTCAGTGCCACCATCCAGCCACC AGCACCCACTGAGTATCTGGAAGTGCCTTTCTTGACCCCGGCTATCGTTGGCTCACCCGCCTACAGAAAGGTTTTTCGT CCTTTCGCCCTGTACCGATTTCACGCAGGCCACACAACTGGCTTGCAACACCTTATTGGCCTTCTAGATGAGGAAGACT CAAGACATGGAGTGACGGGTCCATGGTGGGCTTCGTTGTGCGCACCCTGGACTGTAAGAGGAGAGAGACTGTCCTTTCC TTCCCCTCCCCAACCTCCTCCAGAGAATTAGCAAGTGTTTCCAAAAGGCCACCATGGCCAACTCTTTGTCAGCTGCTGC GGGTGAAGGGTGCTTGCTCAGCCTTGGTGAACATGTCATGGGAGGAGGAGTTGGGAGGACGGCATGGCCGGCTTCCTTG CGTCAGTGTTGTGCAGCAGTCCTGCCTAAGATTCACACATGCATGAATCTTGATCCCTGCTGGAAGACCAACTTATGCT TGCTTCCTTGCTGATTTTCACAGCTGCACGCTATAGCTTTTCTCCCCGCCTCTTCCCCCTGTCCCATCTGTTTAATCCC ACACCCCTTCCTGCATGGATTTTATAAGGCTTGACTGAACAATGTGGAGGATTCAGGAACTGCACTGTCAGCCTTAGCC TTTCTCATTTCATAGCCCGTATGTGTGCATGCGTATTTGTGTAAGGAGTTGAAGAGAGGTGGGGAAGGATCTGTGGATC ATTCAGGTGCCGTGGGTGAATCCTCTCCTCTTACCATTTAATTTCTGCCGTTCACTTGTGTCTCAGATTTCTGGCATCT CAGTCCTTCCCAATCTCTTCAGTATCCCAACAATCTCGCAGCAGACCAGGTCCTTGCTCCTCCAGCATTTGACTGTGTC TGCTGAAAACGTGAAGGCACCAAGAAAGCTACCATGCACTTGCCAACACCCAGATGTGGTTCCAATATTCCAATACTCA CTTTGAACCCTGCTCCAAACTCAGGCCGATGGGGTGTACATCACTGCTCGTTTGTTCATCACATTATCGCCATCTTCAG CACCTCCCTCCTACTTTCACTCAGGATGGAAAGATACTCTCGTGGATATAAGCAAGGTAGATATGCACCCAATATTGGA TGACTACAAAGAAAAGAACACTGCTTACGTGCAGAAGAACTCATTTTCACCTCTGGGTTTCAAGCTGGAAAGAAGCAGC TCTTGCAGTCAGATCAACCCCTTTTGTTCAGCCCATCTCCTGAGGACTACTTAATTCTCCTTTGTCACCTCCAGGACTG GGTGGCGTGCCCTGCCAGGGAGTGAACTGGCCAAGAAGCTGCTGCAGGAAAAAGTGACTCCTGACAACTGATCAGAGAG ATGTGTTGTGGGACCTTCTAACGGGTAATTCAGTCTAGAAAGATAAAATACTTCGACTGAACGTGGACTGTGATTCGTG TCACTGTTTCCCTCTGTTGATATGATGTCAGATGCCCTTCCCACCTCCCTTAGCTATGGATGACTTCTCCTCGTGGTGT CTGAAGAGATCACGTAGAATGTTTGTTCCCTGTACGCATGTAACCTATTTGAGCCCTGTCCTCTTATTTAAGGCAAGTA GCACATTCCTTCCCCTGCTCCCTTTCCCCAGTCTCTATGCTGTCCTAGCACCATTAACTCTGCATTAAACATATGGAAT AATAAACTTAAAAAAAAAAAAAAAAAAA

Stage

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Location (click to highlight)

Comments (click to highlight)

25-30

stage 10

31-44

stage 44

Hindbrain

comparison with other genes

Probe 7

GEISHA Id Sox10.Schmidt.2007

NCBI Ensembl

Gene Name SOX10 SOX10_CHICK

Aliases SOX-10, Sry-boxntranscription factor, SOX-10

Gene Description SRY (sex determining region Y)-box 10 Transcription factor SOX-10 (cSOX10). [Source:Uniprot/SWISSPROT;Acc:Q9W757]

Gene Ontology

NCBI Nucleotide Hit

Ensembl Genome Map contig view

Citation Schmidt C, McGonnell IM, Allen S, Otto A, Patel K. Wnt6 controls amniote neural crest induction through the non-canonical signaling pathway.Dev Dyn. 2007 Sep;236(9):2502-11.

Comments Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204792).

Complete Sequence

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

7-12

stage 12

13-18

stage 18