GEISHA - A Chicken Embryo Gene Expression Database
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TBX5
T-box 5

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolTBX5
Official Full NameT-box 5
CGNC ID6251
also known asT-box transcription factor TBX5|T-box protein 5, TBX5, TBX-5, T-box transcription factor TBX5
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
GenomicGenbank
RNANM_204173
PolypeptideNP_989504
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.961
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human6910ENSG00000089225MIM:142900MIM:601620
Mouse21388ENSMUSG00000018263All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(2) MGI:102541
Xenopus619589, 373738, 373556486854
Zebrafish30071, 100004161ENSDARG00000024894, ENSDARG00000092060ZDB-GENE-991124-7, ZDB-GENE-060601-2ZFIN:ZDB-GENE-991124-7, ZFIN:ZDB-GENE-060601-2
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene373988
Ensembl Gene
KEGGgga:373988

Entry 1

GEISHA IdChEST59k10Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GCCACAGGACGGCTGTTTACCCTGCGCTGACCTATTCAACTTTACCCTCAAAATAATACATTAAAAAGAGAGCGAGAAG
GGAGAGGAGGAAGAGGCAGATAAAACCACGTCCCCGCTCCTCGCTGACGGTTTGATTATTTGAGCAGAGCGGAGGCTGC
GGGGTTGCGTACCCCAGCCGGGCAGCGCGTGGGGGATTCGGCGAAGGAAGCTCGTAACATGGCGGACACCGAGGAAGGC
TTCGGGCTCCCGAGCACGCCGGTTGACTCGGAGGCCAAGGAGCTGCAGGCTGAGGCCAAGCAGGATCCCCAGCTGGGGA
CCACCAGCAAGGCCCCCACCTCTCCACAGGCGGCCTTCACCCAGCAGGGCATGGAGGGGATCAAAGTGTTTTTGCACGA
GCGGGAGCTGTGGCTGAAATTTCACGAGGTGGGGACGGAGATGATCATAACAAAGGCTGGAAGGCGTATGTTTCCCAGT
TACAAAGTGAAGGTCACTGGACTCAATCCAAAAACGAAGTACATACTGTTGATGGATATTGTACCAGCGGATGACCACA
GATACAAATTTGCAGATAATAAATGGTCCGTGACCGGGAAGGCAGAACCGGCCATGCCCGGCCGCCTCTACGTGCACCC
CGACTCCCCCGCTACTGGAGCCCACTGGATGAGGCAGTTGGTTTCCTTCCAGAAGCTCAAGCTCACCAACAACCACCTT
GACCCCTTCGGACATATCATCCTGAACTCCATGCACAAATACCAGCCCCGGCTCCACATCGTGAAGGCGGGATGAGAAC
ACGGCTTTGGCTCCAAGAACACTGCCTTCTGCACCCATGTCTTCCCCGAGACTGCCTTCATCGCTGTTACCTCCTACCA
AAACCACAAGAGATGTAAGGGGGAAGCTACTTAACGTGCATGAAATGGTCGCGTTTTCTCTATCCATCGGTTGGGCCGG
GAGCTGCAAAAACGGAAGTAGGCTTGAAAAAAAAAAATGT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
Early Mesoderm
Primitive Streak
Splanchnic Mesoderm
 
7-12
stage 10
stage 10
stage 11
stage 12
stage 12
Atria
Heart Tube
Sinus Venosus
Telencephalon
Ventricles
 
13-18
stage 13
stage 13
stage 14
stage 17
stage 17
stage 17
stage 18
stage 18
stage 18
Allantois
Atria
Eye
Heart Tube
Lateral Plate Mesoderm
Retina
Sinus Venosus
Somatopleure
Telencephalon
Ventricles
Wing
Wing Mesenchyme
 
19-22
stage 19
stage 19
stage 20
stage 22
stage 22
Allantois
Atria
Eye
Retina
Somatopleure
Splanchnic Mesoderm
Ventricles
Wing Mesenchyme
hand transected

Entry 2

GEISHA IdTbx5.Plageman.2005Data SourcePublication
Complete cDNA Template Probeshow
CGGGGGGCTGCCGCCATGCGGCCCCACGGTGCGGGGGTTCCTCCGGGCAGGAAGGCGGGGGCCGACCCTGCTGTCCGCA
TCGCAGCGAGGAGCCGCAGCCACGCACCCCCCCGCACGCGCAGTGGGGGATTCGGCGAAGGAAGCTCGTAACATGGCGG
ACACCGAGGAAGGCTTCGGGCTCCCGAGCACGCCGGTTGACTCGGAGGCCAAGGAGCTGCAGGCTGAGGCCAAGCAGGA
TCCCCAGCTGGGGACCACCAGCAAGGCCCCCACCTCTCCACAGGCGGCCTTCACCCAGCAGGGCATGGAGGGGATCAAA
GTGTTTTTGCACGAGCGGGAGCTGTGGCTGAAATTTCACGAGGTGGGGACGGAGATGATCATAACAAAGGCTGGAAGGC
GTATGTTTCCCAGTTACAAAGTGAAGGTCACTGGACTCAATCCAAAAACGAAGTACATACTGTTGATGGATATTGTACC
AGCGGATGACCACAGATACAAATTTGCAGATAATAAATGGTCCGTGACCGGGAAGGCAGAACCGGCCATGCCCGGCCGC
CTCTACGTGCACCCCGACTCCCCCGCTACTGGAGCCCACTGGATGAGGCAGTTGGTTTCCTTCCAGAAGCTCAAGCTCA
CCAACAACCACCTTGACCCCTTCGGACATATCATCCTGAACTCCATGCACAAATACCAGCCCCGGCTCCACATCGTGAA
GGCGGATGAGAACAACGGCTTTGGCTCCAAGAACACTGCCTTCTGCACCCATGTCTTCCCCGAGACTGCCTTCATCGCT
GTTACCTCCTACCAAAACCACAAGATCACTCAGCTGAAGATTGAGAACAACCCCTTCGCAAAAGGTTTCCGCGGCAGCG
ATGACATGGAGCTCCACAGGATGTCCAGGATGCAGAGTAAAGAGTACCCAGTTGTTCCCAGGAGCACAGTGAGACAGAA
AGTGTCCTCGAATCACAGCCCCTTCAGCGGTGAGACCAGGGTCCTTTCCACCTCCTCCAACCTGGGCTCCCAGTACCAG
TGTGAGAACGGGGTGTCAAGCACCTCCCAGGACCTGCTGCCGCCCACCAACCCCTACCCGATCTCCCAGGAGCACAGCC
AGATCTACCACTGCACCAAGAGAAAAGATGAGGAATGTTCCACCACCGAGCATCCCTACAAGAAGCCCTACATGGAAAC
TTCACCAGCGGAAGAGGATCCTTTCTACAGGTCCAGTTACCCCCAGCAACAGGGACTGAACACTTCGTACAGGACTGAA
TCAGCCCAGCGCCAGGCATGTATGTACGCCAGCTCTGCTCCCCCCACGGACCCCGTGCCCAGCCTGGAAGACATCAGCT
GTAACACGTGGCCCAGCGTGCCGTCCTACAGCAGTTGCACAGTGTCTGCCATGCAGCCCATGGACAGGTTACCCTACCA
GCATTTCTCTGCCCACTTCACCTCGGGGCCTCTGATGCCCCGGCTCAGCAGCGTGGCCAACCACACGTCCCCCCAGATA
GGAGACACCCATAGCATGTTCCAGCACCAGACCTCAGTTTCTCACCAACCCATTGTGCGGCAGTGTGGACCTCAGACCG
GCATCCAGTCTCCCCCCAGCAGCTTGCAGCCTGCAGAGTTCCTCTATTCCCACGGCGTGCCTCGAACCCTCTCGCCCCA
CCAGTACCACTCGGTGCACGGTGTGGGCATGGTGCCAGAGTGGAGCGAGAACAGCTAACGAGGCAGTCGATGGAAATGG
GAAAAAAAATAAAACGAAATGAAAGAAAAAAGTGAAGGGGGAAATAAGAAAAAAGGAAAGGGAAAACAAAACAAAACAA
AACAAAAAACCAGCACCCCATCAATAACAAAAACGAGAGCGTTTTGCAAGTCTCCTTTAACCGAATGTTCACCGTCAGC
ACTCGAGAGGGATGGACGCTGACCGTGCCACTGGTTGGAAGCACGGATGGAGCACTCATTGGCCATGGCACGATGTGCC
CCCCCCGGTGCTTTGGTTCAGAAGGCAAACCCAGCAGAGCGGAGCGCTGCCCCCACGTCCCCCCAGTCTGTGTCGCTGC
CACAGCCATCCCCTGCCTGGCCCTCCCCTGCCCCTCTCCTTCCCAAAGGGACTCGCGACTCCTGCTGCCTTCCTCAACA
CAGCCAGAGTGCTGGGATGAAAACAACTAGGATGTTAC
CitationPlageman TF, Yutzey KE. T-Box genes and heart development: Putting the "T" in HearT. Dev Dyn. 2005 Jan;232(1):11-20.
CopyrightCopyright © 2005 Wiley-Liss, Inc.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-36
stage 36
Atria
Heart
Ventricles
atrial septum (as)
interventricular septum

Entry 3

GEISHA IdTbx5.Lincoln.2004Data SourcePublication
Complete cDNA Template Probeshow
GAAGGCGGATGAGAACAACGGCTTTGGGTCCAAGAACACTGCCTTCTGCACCCATGTNTTCCCCGAGACTGCCTTCATT
GCTGTTACCTCNTACCAAAACCACAAGATCACTCAGCTGAAGATTGAGAACAACCCCTTTGCAAAAGGTTTCCGCGGCA
GCGATGACATGGAGCTCCACAGGATGTCCAGGATGCAGAGTAAAGAGTACCCAGTTGTTCCCAGGAGCACAGTGAGACA
GAAAGTGTCCTCGAATCACAGCCCCTTCAGCGGTGAGACCAGGGTCCTTTCCACCTCCTCCAACCTGGGCTCCCAGTAC
CAGTGTGAGAACGGGGTGTCAAGCACCTCCCAGGACCTGCTGCCACCCACCAACCCCTACCCGATCTCCCAGGAGCACA
GCCAGATCTACCACTGCACCAAGAGAAAAGATGAGGAATGTTCCACCACCGAGCATCCCTACAAGAAGCCCTACATGGA
AACTTCACCAGCGGAAGAGGATCCTTTCTACAGGTCCAGTTACCCCCAGCAACAGGGACTGAACACTTCGTACAGGACT
GAATCAGCCCAGCGCCAGGCATGTATGTACGCCAGCTCTGCTCCCCCCACGGACCCCGTGCCCAGCCTGGAAGACATCA
GCTGTAACACGTGGCCCAGCGTGCCGTCCTACAGCAGTTGCACAGTGTCTGCCATGCAGCCCATGGACAGGTTACCCTA
CAGCA
CitationLincoln J, Alfieri CM, Yutzey KE. Development of heart valve leaflets and supporting apparatus in chicken and mouse embryos. Dev Dyn. 2004 Jun;230(2):239-50.
CopyrightWiley-Liss, Inc. 2004
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 29
Heart
Valves
atrial septa
31-36
stage 36
Heart
Valves
 

Entry 4

GEISHA IdTbx5.Hurtado.2006Data SourcePublication
Complete cDNA Template Probeshow
CGGGGGGCTGCCGCCATGCGGCCCCACGGTGCGGGGGTTCCTCCGGGCAGGAAGGCGGGGGCCGACCCTGCTGTCCGCA
TCGCAGCGAGGAGCCGCAGCCACGCACCCCCCCGCACGCGCAGTGGGGGATTCGGCGAAGGAAGCTCGTAACATGGCGG
ACACCGAGGAAGGCTTCGGGCTCCCGAGCACGCCGGTTGACTCGGAGGCCAAGGAGCTGCAGGCTGAGGCCAAGCAGGA
TCCCCAGCTGGGGACCACCAGCAAGGCCCCCACCTCTCCACAGGCGGCCTTCACCCAGCAGGGCATGGAGGGGATCAAA
GTGTTTTTGCACGAGCGGGAGCTGTGGCTGAAATTTCACGAGGTGGGGACGGAGATGATCATAACAAAGGCTGGAAGGC
GTATGTTTCCCAGTTACAAAGTGAAGGTCACTGGACTCAATCCAAAAACGAAGTACATACTGTTGATGGATATTGTACC
AGCGGATGACCACAGATACAAATTTGCAGATAATAAATGGTCCGTGACCGGGAAGGCAGAACCGGCCATGCCCGGCCGC
CTCTACGTGCACCCCGACTCCCCCGCTACTGGAGCCCACTGGATGAGGCAGTTGGTTTCCTTCCAGAAGCTCAAGCTCA
CCAACAACCACCTTGACCCCTTCGGACATATCATCCTGAACTCCATGCACAAATACCAGCCCCGGCTCCACATCGTGAA
GGCGGATGAGAACAACGGCTTTGGCTCCAAGAACACTGCCTTCTGCACCCATGTCTTCCCCGAGACTGCCTTCATCGCT
GTTACCTCCTACCAAAACCACAAGATCACTCAGCTGAAGATTGAGAACAACCCCTTCGCAAAAGGTTTCCGCGGCAGCG
ATGACATGGAGCTCCACAGGATGTCCAGGATGCAGAGTAAAGAGTACCCAGTTGTTCCCAGGAGCACAGTGAGACAGAA
AGTGTCCTCGAATCACAGCCCCTTCAGCGGTGAGACCAGGGTCCTTTCCACCTCCTCCAACCTGGGCTCCCAGTACCAG
TGTGAGAACGGGGTGTCAAGCACCTCCCAGGACCTGCTGCCGCCCACCAACCCCTACCCGATCTCCCAGGAGCACAGCC
AGATCTACCACTGCACCAAGAGAAAAGATGAGGAATGTTCCACCACCGAGCATCCCTACAAGAAGCCCTACATGGAAAC
TTCACCAGCGGAAGAGGATCCTTTCTACAGGTCCAGTTACCCCCAGCAACAGGGACTGAACACTTCGTACAGGACTGAA
TCAGCCCAGCGCCAGGCATGTATGTACGCCAGCTCTGCTCCCCCCACGGACCCCGTGCCCAGCCTGGAAGACATCAGCT
GTAACACGTGGCCCAGCGTGCCGTCCTACAGCAGTTGCACAGTGTCTGCCATGCAGCCCATGGACAGGTTACCCTACCA
GCATTTCTCTGCCCACTTCACCTCGGGGCCTCTGATGCCCCGGCTCAGCAGCGTGGCCAACCACACGTCCCCCCAGATA
GGAGACACCCATAGCATGTTCCAGCACCAGACCTCAGTTTCTCACCAACCCATTGTGCGGCAGTGTGGACCTCAGACCG
GCATCCAGTCTCCCCCCAGCAGCTTGCAGCCTGCAGAGTTCCTCTATTCCCACGGCGTGCCTCGAACCCTCTCGCCCCA
CCAGTACCACTCGGTGCACGGTGTGGGCATGGTGCCAGAGTGGAGCGAGAACAGCTAACGAGGCAGTCGATGGAAATGG
GAAAAAAAATAAAACGAAATGAAAGAAAAAAGTGAAGGGGGAAATAAGAAAAAAGGAAAGGGAAAACAAAACAAAACAA
AACAAAAAACCAGCACCCCATCAATAACAAAAACGAGAGCGTTTTGCAAGTCTCCTTTAACCGAATGTTCACCGTCAGC
ACTCGAGAGGGATGGACGCTGACCGTGCCACTGGTTGGAAGCACGGATGGAGCACTCATTGGCCATGGCACGATGTGCC
CCCCCCGGTGCTTTGGTTCAGAAGGCAAACCCAGCAGAGCGGAGCGCTGCCCCCACGTCCCCCCAGTCTGTGTCGCTGC
CACAGCCATCCCCTGCCTGGCCCTCCCCTGCCCCTCTCCTTCCCAAAGGGACTCGCGACTCCTGCTGCCTTCCTCAACA
CAGCCAGAGTGCTGGGATGAAAACAACTAGGATGTTAC
CitationHurtado R, Mikawa T. Enhanced sensitivity and stability in two-color in situ hybridization by means of a novel chromagenic substrate combination. Dev Dyn. 2006 Oct;235(10):2811-6.
CopyrightCopyright © 2006 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204173).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
Atria
Ear/Otic Placcode
Eye
Heart
Hindbrain
Limb Buds
Nephric Ducts
Ventricles
Wing
 

Entry 5

GEISHA IdTbx5.Canto-Soler.2006Data SourcePublication
Complete cDNA Template Probeshow
CGGGGGGCTGCCGCCATGCGGCCCCACGGTGCGGGGGTTCCTCCGGGCAGGAAGGCGGGGGCCGACCCTGCTGTCCGCA
TCGCAGCGAGGAGCCGCAGCCACGCACCCCCCCGCACGCGCAGTGGGGGATTCGGCGAAGGAAGCTCGTAACATGGCGG
ACACCGAGGAAGGCTTCGGGCTCCCGAGCACGCCGGTTGACTCGGAGGCCAAGGAGCTGCAGGCTGAGGCCAAGCAGGA
TCCCCAGCTGGGGACCACCAGCAAGGCCCCCACCTCTCCACAGGCGGCCTTCACCCAGCAGGGCATGGAGGGGATCAAA
GTGTTTTTGCACGAGCGGGAGCTGTGGCTGAAATTTCACGAGGTGGGGACGGAGATGATCATAACAAAGGCTGGAAGGC
GTATGTTTCCCAGTTACAAAGTGAAGGTCACTGGACTCAATCCAAAAACGAAGTACATACTGTTGATGGATATTGTACC
AGCGGATGACCACAGATACAAATTTGCAGATAATAAATGGTCCGTGACCGGGAAGGCAGAACCGGCCATGCCCGGCCGC
CTCTACGTGCACCCCGACTCCCCCGCTACTGGAGCCCACTGGATGAGGCAGTTGGTTTCCTTCCAGAAGCTCAAGCTCA
CCAACAACCACCTTGACCCCTTCGGACATATCATCCTGAACTCCATGCACAAATACCAGCCCCGGCTCCACATCGTGAA
GGCGGATGAGAACAACGGCTTTGGCTCCAAGAACACTGCCTTCTGCACCCATGTCTTCCCCGAGACTGCCTTCATCGCT
GTTACCTCCTACCAAAACCACAAGATCACTCAGCTGAAGATTGAGAACAACCCCTTCGCAAAAGGTTTCCGCGGCAGCG
ATGACATGGAGCTCCACAGGATGTCCAGGATGCAGAGTAAAGAGTACCCAGTTGTTCCCAGGAGCACAGTGAGACAGAA
AGTGTCCTCGAATCACAGCCCCTTCAGCGGTGAGACCAGGGTCCTTTCCACCTCCTCCAACCTGGGCTCCCAGTACCAG
TGTGAGAACGGGGTGTCAAGCACCTCCCAGGACCTGCTGCCGCCCACCAACCCCTACCCGATCTCCCAGGAGCACAGCC
AGATCTACCACTGCACCAAGAGAAAAGATGAGGAATGTTCCACCACCGAGCATCCCTACAAGAAGCCCTACATGGAAAC
TTCACCAGCGGAAGAGGATCCTTTCTACAGGTCCAGTTACCCCCAGCAACAGGGACTGAACACTTCGTACAGGACTGAA
TCAGCCCAGCGCCAGGCATGTATGTACGCCAGCTCTGCTCCCCCCACGGACCCCGTGCCCAGCCTGGAAGACATCAGCT
GTAACACGTGGCCCAGCGTGCCGTCCTACAGCAGTTGCACAGTGTCTGCCATGCAGCCCATGGACAGGTTACCCTACCA
GCATTTCTCTGCCCACTTCACCTCGGGGCCTCTGATGCCCCGGCTCAGCAGCGTGGCCAACCACACGTCCCCCCAGATA
GGAGACACCCATAGCATGTTCCAGCACCAGACCTCAGTTTCTCACCAACCCATTGTGCGGCAGTGTGGACCTCAGACCG
GCATCCAGTCTCCCCCCAGCAGCTTGCAGCCTGCAGAGTTCCTCTATTCCCACGGCGTGCCTCGAACCCTCTCGCCCCA
CCAGTACCACTCGGTGCACGGTGTGGGCATGGTGCCAGAGTGGAGCGAGAACAGCTAACGAGGCAGTCGATGGAAATGG
GAAAAAAAATAAAACGAAATGAAAGAAAAAAGTGAAGGGGGAAATAAGAAAAAAGGAAAGGGAAAACAAAACAAAACAA
AACAAAAAACCAGCACCCCATCAATAACAAAAACGAGAGCGTTTTGCAAGTCTCCTTTAACCGAATGTTCACCGTCAGC
ACTCGAGAGGGATGGACGCTGACCGTGCCACTGGTTGGAAGCACGGATGGAGCACTCATTGGCCATGGCACGATGTGCC
CCCCCCGGTGCTTTGGTTCAGAAGGCAAACCCAGCAGAGCGGAGCGCTGCCCCCACGTCCCCCCAGTCTGTGTCGCTGC
CACAGCCATCCCCTGCCTGGCCCTCCCCTGCCCCTCTCCTTCCCAAAGGGACTCGCGACTCCTGCTGCCTTCCTCAACA
CAGCCAGAGTGCTGGGATGAAAACAACTAGGATGTTAC
CitationCanto-Soler MV, Adler R. Optic cup and lens development requires Pax6 expression in the early optic vesicle during a narrow time window. Dev Biol. 2006 Jun 1;294(1):119-32. Epub 2006 Mar 27.
CopyrightReprinted from Developmental Biology, 294, Issue 1, M. Valeria Canto-Soler and Ruben Adler, Optic cup and lens development requires Pax6 expression in the early optic vesicle during a narrow time window, 119-132, 2006, with permission from Elsevier. Copyright © 2006 Elsevier B.V. All rights
CommentsThe authors state: Probes were generated from cDNAs generously provided by the following investigators: cTbx5 (Katherine Yutzey, Children's Hospital Medical Center, Cincinnati, OH). As information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204173).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 11
Retina
 
13-18
stage 18
Retina
 

Entry 6

GEISHA IdTbx5.Krause.2004Data SourcePublication
Reverse cDNA Template Probeshow
CGGGGGGCTGCCGCCATGCGGCCCCACGGTGCGGGGGTTCCTCCGGGCAGGAAGGCGGGGGCCGACCCTGCTGTCCGCA
TCGCAGCGAGGAGCCGCAGCCACGCACCCCCCCGCACGCGCAGTGGGGGATTCGGCGAAGGAAGCTCGTAACATGGCGG
ACACCGAGGAAGGCTTCGGGCTCCCGAGCACGCCGGTTGACTCGGAGGCCAAGGAGCTGCAGGCTGAGGCCAAGCAGGA
TCCCCAGCTGGGGACCACCAGCAAGGCCCCCACCTCTCCACAGGCGGCCTTCACCCAGCAGGGCATGGAGGGGATCAAA
GTGTTTTTGCACGAGCGGGAGCTGTGGCTGAAATTTCACGAGGTGGGGACGGAGATGATCATAACAAAGGCTGGAAGGC
GTATGTTTCCCAGTTACAAAGTGAAGGTCACTGGACTCAATCCAAAAACGAAGTACATACTGTTGATGGATATTGTACC
AGCGGATGACCACAGATACAAATTTGCAGATAATAAATGGTCCGTGACCGGGAAGGCAGAACCGGCCATGCCCGGCCGC
CTCTACGTGCACCCCGACTCCCCCGCTACTGGAGCCCACTGGATGAGGCAGTTGGTTTCCTTCCAGAAGCTCAAGCTCA
CCAACAACCACCTTGACCCCTTCGGACATATCATCCTGAACTCCATGCACAAATACCAGCCCCGGCTCCACATCGTGAA
GGCGGATGAGAACAACGGCTTTGGCTCCAAGAACACTGCCTTCTGCACCCATGTCTTCCCCGAGACTGCCTTCATCGCT
GTTACCTCCTACCAAAACCACAAGATCACTCAGCTGAAGATTGAGAACAACCCCTTCGCAAAAGGTTTCCGCGGCAGCG
ATGACATGGAGCTCCACAGGATGTCCAGGATGCAGAGTAAAGAGTACCCAGTTGTTCCCAGGAGCACAGTGAGACAGAA
AGTGTCCTCGAATCACAGCCCCTTCAGCGGTGAGACCAGGGTCCTTTCCACCTCCTCCAACCTGGGCTCCCAGTACCAG
TGTGAGAACGGGGTGTCAAGCACCTCCCAGGACCTGCTGCCGCCCACCAACCCCTACCCGATCTCCCAGGAGCACAGCC
AGATCTACCACTGCACCAAGAGAAAAGATGAGGAATGTTCCACCACCGAGCATCCCTACAAGAAGCCCTACATGGAAAC
TTCACCAGCGGAAGAGGATCCTTTCTACAGGTCCAGTTACCCCCAGCAACAGGGACTGAACACTTCGTACAGGACTGAA
TCAGCCCAGCGCCAGGCATGTATGTACGCCAGCTCTGCTCCCCCCACGGACCCCGTGCCCAGCCTGGAAGACATCAGCT
GTAACACGTGGCCCAGCGTGCCGTCCTACAGCAGTTGCACAGTGTCTGCCATGCAGCCCATGGACAGGTTACCCTACCA
GCATTTCTCTGCCCACTTCACCTCGGGGCCTCTGATGCCCCGGCTCAGCAGCGTGGCCAACCACACGTCCCCCCAGATA
GGAGACACCCATAGCATGTTCCAGCACCAGACCTCAGTTTCTCACCAACCCATTGTGCGGCAGTGTGGACCTCAGACCG
GCATCCAGTCTCCCCCCAGCAGCTTGCAGCCTGCAGAGTTCCTCTATTCCCACGGCGTGCCTCGAACCCTCTCGCCCCA
CCAGTACCACTCGGTGCACGGTGTGGGCATGGTGCCAGAGTGGAGCGAGAACAGCTAACGAGGCAGTCGATGGAAATGG
GAAAAAAAATAAAACGAAATGAAAGAAAAAAGTGAAGGGGGAAATAAGAAAAAAGGAAAGGGAAAACAAAACAAAACAA
AACAAAAAACCAGCACCCCATCAATAACAAAAACGAGAGCGTTTTGCAAGTCTCCTTTAACCGAATGTTCACCGTCAGC
ACTCGAGAGGGATGGACGCTGACCGTGCCACTGGTTGGAAGCACGGATGGAGCACTCATTGGCCATGGCACGATGTGCC
CCCCCCGGTGCTTTGGTTCAGAAGGCAAACCCAGCAGAGCGGAGCGCTGCCCCCACGTCCCCCCAGTCTGTGTCGCTGC
CACAGCCATCCCCTGCCTGGCCCTCCCCTGCCCCTCTCCTTCCCAAAGGGACTCGCGACTCCTGCTGCCTTCCTCAACA
CAGCCAGAGTGCTGGGATGAAAACAACTAGGATGTTAC
CitationKrause A, Zacharias W, Camarata T, Linkhart B, Law E, Lischke A, Miljan E, Simon HG. Tbx5 and Tbx4 transcription factors interact with a new chicken PDZ-LIM protein in limb and heart development. Dev Biol. 2004 Sep 1;273(1):106-20.
CopyrightReprinted from Developmental Biology, Volume 273, Issue 1, Ange Krause, William Zacharias, Troy Camarata, Barbara Linkhart, Evelyn Law, Antje Lischke, Erik Miljan, and Hans-Georg Simon, Tbx5 and Tbx4 transcription factors interact with a new chicken PDZ-LIM protein in limb and heart development, Pages 106-120, Copyright 2004, with permission from Elsevier. Copyright © 2004 Elsevier B.V. All rights reserved.
CommentsAuthors said: the Tbx4 and Tbx5 antisense probes contain the 3′ untranslated regions and most of the transactivation domains. As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204173.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 15
stage 18
Wing
 
19-24
stage 22
Atria
Ventricles
 
25-30
stage 25
stage 25
stage 29
stage 29
Atria
Ventricles
Wing
 
31-32
stage 32
Wing

Entry 7

GEISHA IdTbx5.Yamada.2000Data SourcePublication
Complete cDNA Template Probeshow
CGGGGGGCTGCCGCCATGCGGCCCCACGGTGCGGGGGTTCCTCCGGGCAGGAAGGCGGGGGCCGACCCTGCTGTCCGCA
TCGCAGCGAGGAGCCGCAGCCACGCACCCCCCCGCACGCGCAGTGGGGGATTCGGCGAAGGAAGCTCGTAACATGGCGG
ACACCGAGGAAGGCTTCGGGCTCCCGAGCACGCCGGTTGACTCGGAGGCCAAGGAGCTGCAGGCTGAGGCCAAGCAGGA
TCCCCAGCTGGGGACCACCAGCAAGGCCCCCACCTCTCCACAGGCGGCCTTCACCCAGCAGGGCATGGAGGGGATCAAA
GTGTTTTTGCACGAGCGGGAGCTGTGGCTGAAATTTCACGAGGTGGGGACGGAGATGATCATAACAAAGGCTGGAAGGC
GTATGTTTCCCAGTTACAAAGTGAAGGTCACTGGACTCAATCCAAAAACGAAGTACATACTGTTGATGGATATTGTACC
AGCGGATGACCACAGATACAAATTTGCAGATAATAAATGGTCCGTGACCGGGAAGGCAGAACCGGCCATGCCCGGCCGC
CTCTACGTGCACCCCGACTCCCCCGCTACTGGAGCCCACTGGATGAGGCAGTTGGTTTCCTTCCAGAAGCTCAAGCTCA
CCAACAACCACCTTGACCCCTTCGGACATATCATCCTGAACTCCATGCACAAATACCAGCCCCGGCTCCACATCGTGAA
GGCGGATGAGAACAACGGCTTTGGCTCCAAGAACACTGCCTTCTGCACCCATGTCTTCCCCGAGACTGCCTTCATCGCT
GTTACCTCCTACCAAAACCACAAGATCACTCAGCTGAAGATTGAGAACAACCCCTTCGCAAAAGGTTTCCGCGGCAGCG
ATGACATGGAGCTCCACAGGATGTCCAGGATGCAGAGTAAAGAGTACCCAGTTGTTCCCAGGAGCACAGTGAGACAGAA
AGTGTCCTCGAATCACAGCCCCTTCAGCGGTGAGACCAGGGTCCTTTCCACCTCCTCCAACCTGGGCTCCCAGTACCAG
TGTGAGAACGGGGTGTCAAGCACCTCCCAGGACCTGCTGCCGCCCACCAACCCCTACCCGATCTCCCAGGAGCACAGCC
AGATCTACCACTGCACCAAGAGAAAAGATGAGGAATGTTCCACCACCGAGCATCCCTACAAGAAGCCCTACATGGAAAC
TTCACCAGCGGAAGAGGATCCTTTCTACAGGTCCAGTTACCCCCAGCAACAGGGACTGAACACTTCGTACAGGACTGAA
TCAGCCCAGCGCCAGGCATGTATGTACGCCAGCTCTGCTCCCCCCACGGACCCCGTGCCCAGCCTGGAAGACATCAGCT
GTAACACGTGGCCCAGCGTGCCGTCCTACAGCAGTTGCACAGTGTCTGCCATGCAGCCCATGGACAGGTTACCCTACCA
GCATTTCTCTGCCCACTTCACCTCGGGGCCTCTGATGCCCCGGCTCAGCAGCGTGGCCAACCACACGTCCCCCCAGATA
GGAGACACCCATAGCATGTTCCAGCACCAGACCTCAGTTTCTCACCAACCCATTGTGCGGCAGTGTGGACCTCAGACCG
GCATCCAGTCTCCCCCCAGCAGCTTGCAGCCTGCAGAGTTCCTCTATTCCCACGGCGTGCCTCGAACCCTCTCGCCCCA
CCAGTACCACTCGGTGCACGGTGTGGGCATGGTGCCAGAGTGGAGCGAGAACAGCTAACGAGGCAGTCGATGGAAATGG
GAAAAAAAATAAAACGAAATGAAAGAAAAAAGTGAAGGGGGAAATAAGAAAAAAGGAAAGGGAAAACAAAACAAAACAA
AACAAAAAACCAGCACCCCATCAATAACAAAAACGAGAGCGTTTTGCAAGTCTCCTTTAACCGAATGTTCACCGTCAGC
ACTCGAGAGGGATGGACGCTGACCGTGCCACTGGTTGGAAGCACGGATGGAGCACTCATTGGCCATGGCACGATGTGCC
CCCCCCGGTGCTTTGGTTCAGAAGGCAAACCCAGCAGAGCGGAGCGCTGCCCCCACGTCCCCCCAGTCTGTGTCGCTGC
CACAGCCATCCCCTGCCTGGCCCTCCCCTGCCCCTCTCCTTCCCAAAGGGACTCGCGACTCCTGCTGCCTTCCTCAACA
CAGCCAGAGTGCTGGGATGAAAACAACTAGGATGTTAC
CitationYamada M, Revelli JP, Eichele G, Barron M, Schwartz RJ. Expression of chick Tbx-2, Tbx-3, and Tbx-5 genes during early heart development: evidence for BMP2 induction of Tbx2. Dev Biol. 2000 Dec 1;228(1):95-105.
CopyrightReprinted with permission from Elsevier. Copyright © 2000 Elsevier B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204173).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
Cardiovascular
Early Embryo
Cardiogenic Region
7-12
stage 8
stage 10
Heart Tube
 
19-20
stage 20
 Figure 1 compares expression patterns of Tbx2, Tbx3, Tbx5 and bmp2 in early chick embryos. Figure includes HH stages 5-8, 10, 11, 16, 19 and 20.

Entry 8

GEISHA IdTbx5.Maden.2007Data SourcePublication
Complete cDNA Template Probeshow
CGGGGGGCTGCCGCCATGCGGCCCCACGGTGCGGGGGTTCCTCCGGGCAGGAAGGCGGGGGCCGACCCTGCTGTCCGCA
TCGCAGCGAGGAGCCGCAGCCACGCACCCCCCCGCACGCGCAGTGGGGGATTCGGCGAAGGAAGCTCGTAACATGGCGG
ACACCGAGGAAGGCTTCGGGCTCCCGAGCACGCCGGTTGACTCGGAGGCCAAGGAGCTGCAGGCTGAGGCCAAGCAGGA
TCCCCAGCTGGGGACCACCAGCAAGGCCCCCACCTCTCCACAGGCGGCCTTCACCCAGCAGGGCATGGAGGGGATCAAA
GTGTTTTTGCACGAGCGGGAGCTGTGGCTGAAATTTCACGAGGTGGGGACGGAGATGATCATAACAAAGGCTGGAAGGC
GTATGTTTCCCAGTTACAAAGTGAAGGTCACTGGACTCAATCCAAAAACGAAGTACATACTGTTGATGGATATTGTACC
AGCGGATGACCACAGATACAAATTTGCAGATAATAAATGGTCCGTGACCGGGAAGGCAGAACCGGCCATGCCCGGCCGC
CTCTACGTGCACCCCGACTCCCCCGCTACTGGAGCCCACTGGATGAGGCAGTTGGTTTCCTTCCAGAAGCTCAAGCTCA
CCAACAACCACCTTGACCCCTTCGGACATATCATCCTGAACTCCATGCACAAATACCAGCCCCGGCTCCACATCGTGAA
GGCGGATGAGAACAACGGCTTTGGCTCCAAGAACACTGCCTTCTGCACCCATGTCTTCCCCGAGACTGCCTTCATCGCT
GTTACCTCCTACCAAAACCACAAGATCACTCAGCTGAAGATTGAGAACAACCCCTTCGCAAAAGGTTTCCGCGGCAGCG
ATGACATGGAGCTCCACAGGATGTCCAGGATGCAGAGTAAAGAGTACCCAGTTGTTCCCAGGAGCACAGTGAGACAGAA
AGTGTCCTCGAATCACAGCCCCTTCAGCGGTGAGACCAGGGTCCTTTCCACCTCCTCCAACCTGGGCTCCCAGTACCAG
TGTGAGAACGGGGTGTCAAGCACCTCCCAGGACCTGCTGCCGCCCACCAACCCCTACCCGATCTCCCAGGAGCACAGCC
AGATCTACCACTGCACCAAGAGAAAAGATGAGGAATGTTCCACCACCGAGCATCCCTACAAGAAGCCCTACATGGAAAC
TTCACCAGCGGAAGAGGATCCTTTCTACAGGTCCAGTTACCCCCAGCAACAGGGACTGAACACTTCGTACAGGACTGAA
TCAGCCCAGCGCCAGGCATGTATGTACGCCAGCTCTGCTCCCCCCACGGACCCCGTGCCCAGCCTGGAAGACATCAGCT
GTAACACGTGGCCCAGCGTGCCGTCCTACAGCAGTTGCACAGTGTCTGCCATGCAGCCCATGGACAGGTTACCCTACCA
GCATTTCTCTGCCCACTTCACCTCGGGGCCTCTGATGCCCCGGCTCAGCAGCGTGGCCAACCACACGTCCCCCCAGATA
GGAGACACCCATAGCATGTTCCAGCACCAGACCTCAGTTTCTCACCAACCCATTGTGCGGCAGTGTGGACCTCAGACCG
GCATCCAGTCTCCCCCCAGCAGCTTGCAGCCTGCAGAGTTCCTCTATTCCCACGGCGTGCCTCGAACCCTCTCGCCCCA
CCAGTACCACTCGGTGCACGGTGTGGGCATGGTGCCAGAGTGGAGCGAGAACAGCTAACGAGGCAGTCGATGGAAATGG
GAAAAAAAATAAAACGAAATGAAAGAAAAAAGTGAAGGGGGAAATAAGAAAAAAGGAAAGGGAAAACAAAACAAAACAA
AACAAAAAACCAGCACCCCATCAATAACAAAAACGAGAGCGTTTTGCAAGTCTCCTTTAACCGAATGTTCACCGTCAGC
ACTCGAGAGGGATGGACGCTGACCGTGCCACTGGTTGGAAGCACGGATGGAGCACTCATTGGCCATGGCACGATGTGCC
CCCCCCGGTGCTTTGGTTCAGAAGGCAAACCCAGCAGAGCGGAGCGCTGCCCCCACGTCCCCCCAGTCTGTGTCGCTGC
CACAGCCATCCCCTGCCTGGCCCTCCCCTGCCCCTCTCCTTCCCAAAGGGACTCGCGACTCCTGCTGCCTTCCTCAACA
CAGCCAGAGTGCTGGGATGAAAACAACTAGGATGTTAC
CitationMaden M, Blentic A, Reijntjes S, Seguin S, Gale E, Graham A. (2007). Retinoic acid is required for specification of the ventral eye field and for Rathke's pouch in the avian embryo. Int J Dev Biol. 2007;51(3):191-200.
Copyright"Reprinted from Int. J. Dev. Biol., 51, Maden M, Blentic A, Reijntjes S, Seguin S, Gale E, Graham A, Retinoic acid is required for specification of the ventral eye field and for Rathke's pouch in the avian embryo, 191-200, Copyright (2007), with permission from Copyright © 2007 UBC Press". All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc #NM_204173). Images are quail, but sequence and map shown are chick.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 14
Eye
Quail
31-44
stage 44
Eye
Fig. 2. All images for comparison.
Quail

Entry 9

GEISHA IdTbx5.Liberatore.2000Data SourcePublication
Complete cDNA Template Probeshow
GAAGGCGGATGAGAACAACGGCTTTGGGTCCAAGAACACTGCCTTCTGCACCCATGTNTTCCCCGAGACTGCCTTCATT
GCTGTTACCTCNTACCAAAACCACAAGATCACTCAGCTGAAGATTGAGAACAACCCCTTTGCAAAAGGTTTCCGCGGCA
GCGATGACATGGAGCTCCACAGGATGTCCAGGATGCAGAGTAAAGAGTACCCAGTTGTTCCCAGGAGCACAGTGAGACA
GAAAGTGTCCTCGAATCACAGCCCCTTCAGCGGTGAGACCAGGGTCCTTTCCACCTCCTCCAACCTGGGCTCCCAGTAC
CAGTGTGAGAACGGGGTGTCAAGCACCTCCCAGGACCTGCTGCCACCCACCAACCCCTACCCGATCTCCCAGGAGCACA
GCCAGATCTACCACTGCACCAAGAGAAAAGATGAGGAATGTTCCACCACCGAGCATCCCTACAAGAAGCCCTACATGGA
AACTTCACCAGCGGAAGAGGATCCTTTCTACAGGTCCAGTTACCCCCAGCAACAGGGACTGAACACTTCGTACAGGACT
GAATCAGCCCAGCGCCAGGCATGTATGTACGCCAGCTCTGCTCCCCCCACGGACCCCGTGCCCAGCCTGGAAGACATCA
GCTGTAACACGTGGCCCAGCGTGCCGTCCTACAGCAGTTGCACAGTGTCTGCCATGCAGCCCATGGACAGGTTACCCTA
CAG
CitationLiberatore CM, Searcy-Schrick RD, Yutzey KE. Ventricular expression of tbx5 inhibits normal heart chamber development. Dev Biol. 2000 Jul 1;223(1):169-80.
CopyrightReprinted with permission from Elsevier. Copyright © date Elsevier B.V. All rights reserved.
CommentsAccording to the authors, "Oligonucleotide primers for PCR were used to amplify nucleotides from +648 to +1361 of the reported chicken tbx5 sequence (Isaac et al., 1998) (GenBank Accession No. AF033671)." Sequence below was obtained from NCBI using this information.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 8
stage 9
stage 10
stage 12
Atria
Heart
Heart Tube
Mesoderm
A-V Junction
Cardiogenic Mesoderm
Posterior Atrial Region
13-14
stage 14
stage 14
Atria
Eye
Heart
Limb Buds
Pharyngeal Arches and Clefts
Wing
A-V Junction
Figure 1 compares the expression of Tbx5, Nkx2-5 and AMHC1 in the developing heart at stages HH10, HH12 and HH14.
Posterior Atrial Region

Entry 10

GEISHA IdTBX5.Peters.2002Data SourcePublication
Complete cDNA Template Probeshow
CGGGGGGCTGCCGCCATGCGGCCCCACGGTGCGGGGGTTCCTCCGGGCAGGAAGGCGGGGGCCGACCCTGCTGTCCGCA
TCGCAGCGAGGAGCCGCAGCCACGCACCCCCCCGCACGCGCAGTGGGGGATTCGGCGAAGGAAGCTCGTAACATGGCGG
ACACCGAGGAAGGCTTCGGGCTCCCGAGCACGCCGGTTGACTCGGAGGCCAAGGAGCTGCAGGCTGAGGCCAAGCAGGA
TCCCCAGCTGGGGACCACCAGCAAGGCCCCCACCTCTCCACAGGCGGCCTTCACCCAGCAGGGCATGGAGGGGATCAAA
GTGTTTTTGCACGAGCGGGAGCTGTGGCTGAAATTTCACGAGGTGGGGACGGAGATGATCATAACAAAGGCTGGAAGGC
GTATGTTTCCCAGTTACAAAGTGAAGGTCACTGGACTCAATCCAAAAACGAAGTACATACTGTTGATGGATATTGTACC
AGCGGATGACCACAGATACAAATTTGCAGATAATAAATGGTCCGTGACCGGGAAGGCAGAACCGGCCATGCCCGGCCGC
CTCTACGTGCACCCCGACTCCCCCGCTACTGGAGCCCACTGGATGAGGCAGTTGGTTTCCTTCCAGAAGCTCAAGCTCA
CCAACAACCACCTTGACCCCTTCGGACATATCATCCTGAACTCCATGCACAAATACCAGCCCCGGCTCCACATCGTGAA
GGCGGATGAGAACAACGGCTTTGGCTCCAAGAACACTGCCTTCTGCACCCATGTCTTCCCCGAGACTGCCTTCATCGCT
GTTACCTCCTACCAAAACCACAAGATCACTCAGCTGAAGATTGAGAACAACCCCTTCGCAAAAGGTTTCCGCGGCAGCG
ATGACATGGAGCTCCACAGGATGTCCAGGATGCAGAGTAAAGAGTACCCAGTTGTTCCCAGGAGCACAGTGAGACAGAA
AGTGTCCTCGAATCACAGCCCCTTCAGCGGTGAGACCAGGGTCCTTTCCACCTCCTCCAACCTGGGCTCCCAGTACCAG
TGTGAGAACGGGGTGTCAAGCACCTCCCAGGACCTGCTGCCGCCCACCAACCCCTACCCGATCTCCCAGGAGCACAGCC
AGATCTACCACTGCACCAAGAGAAAAGATGAGGAATGTTCCACCACCGAGCATCCCTACAAGAAGCCCTACATGGAAAC
TTCACCAGCGGAAGAGGATCCTTTCTACAGGTCCAGTTACCCCCAGCAACAGGGACTGAACACTTCGTACAGGACTGAA
TCAGCCCAGCGCCAGGCATGTATGTACGCCAGCTCTGCTCCCCCCACGGACCCCGTGCCCAGCCTGGAAGACATCAGCT
GTAACACGTGGCCCAGCGTGCCGTCCTACAGCAGTTGCACAGTGTCTGCCATGCAGCCCATGGACAGGTTACCCTACCA
GCATTTCTCTGCCCACTTCACCTCGGGGCCTCTGATGCCCCGGCTCAGCAGCGTGGCCAACCACACGTCCCCCCAGATA
GGAGACACCCATAGCATGTTCCAGCACCAGACCTCAGTTTCTCACCAACCCATTGTGCGGCAGTGTGGACCTCAGACCG
GCATCCAGTCTCCCCCCAGCAGCTTGCAGCCTGCAGAGTTCCTCTATTCCCACGGCGTGCCTCGAACCCTCTCGCCCCA
CCAGTACCACTCGGTGCACGGTGTGGGCATGGTGCCAGAGTGGAGCGAGAACAGCTAACGAGGCAGTCGATGGAAATGG
GAAAAAAAATAAAACGAAATGAAAGAAAAAAGTGAAGGGGGAAATAAGAAAAAAGGAAAGGGAAAACAAAACAAAACAA
AACAAAAAACCAGCACCCCATCAATAACAAAAACGAGAGCGTTTTGCAAGTCTCCTTTAACCGAATGTTCACCGTCAGC
ACTCGAGAGGGATGGACGCTGACCGTGCCACTGGTTGGAAGCACGGATGGAGCACTCATTGGCCATGGCACGATGTGCC
CCCCCCGGTGCTTTGGTTCAGAAGGCAAACCCAGCAGAGCGGAGCGCTGCCCCCACGTCCCCCCAGTCTGTGTCGCTGC
CACAGCCATCCCCTGCCTGGCCCTCCCCTGCCCCTCTCCTTCCCAAAGGGACTCGCGACTCCTGCTGCCTTCCTCAACA
CAGCCAGAGTGCTGGGATGAAAACAACTAGGATGTTAC
CitationPeters MA, Cepko CL (2002). The dorsal-ventral axis of the neural retina is divided into multiple domains of restricted gene expression which exhibit features of lineage compartments. Dev Biol. 2002 Nov 1;251(1):59-73.
Copyright"Reprinted from Developmental Biology, 251(1), Peters MA, Cepko CL, The dorsal-ventral axis of the neural retina is divided into multiple domains of restricted gene expression which exhibit features of lineage compartments, 59-73, Copyright (2002), with permission from Elsevier". Copyright © ( 2002) Elsevier B.V. All rights reserved.
CommentsAccording to authors , "Probes for Pax2, Bmp4, Tbx5, SOHo, ephrin-B1, ephrin-B2, EphB1-B3, ALDH3/ALDH6, and ALDH1 were prepared as described (refs)." As information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204173).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
Retina
double labeled
19-24
stage 22
Retina
 
31-44
stage 44
stage 44
Eye
 

Entry 11

GEISHA IdTBX5.López-Sánchez.2010Data SourcePublication
Complete cDNA Template Probeshow
CGGGGGGCTGCCGCCATGCGGCCCCACGGTGCGGGGGTTCCTCCGGGCAGGAAGGCGGGGGCCGACCCTGCTGTCCGCA
TCGCAGCGAGGAGCCGCAGCCACGCACCCCCCCGCACGCGCAGTGGGGGATTCGGCGAAGGAAGCTCGTAACATGGCGG
ACACCGAGGAAGGCTTCGGGCTCCCGAGCACGCCGGTTGACTCGGAGGCCAAGGAGCTGCAGGCTGAGGCCAAGCAGGA
TCCCCAGCTGGGGACCACCAGCAAGGCCCCCACCTCTCCACAGGCGGCCTTCACCCAGCAGGGCATGGAGGGGATCAAA
GTGTTTTTGCACGAGCGGGAGCTGTGGCTGAAATTTCACGAGGTGGGGACGGAGATGATCATAACAAAGGCTGGAAGGC
GTATGTTTCCCAGTTACAAAGTGAAGGTCACTGGACTCAATCCAAAAACGAAGTACATACTGTTGATGGATATTGTACC
AGCGGATGACCACAGATACAAATTTGCAGATAATAAATGGTCCGTGACCGGGAAGGCAGAACCGGCCATGCCCGGCCGC
CTCTACGTGCACCCCGACTCCCCCGCTACTGGAGCCCACTGGATGAGGCAGTTGGTTTCCTTCCAGAAGCTCAAGCTCA
CCAACAACCACCTTGACCCCTTCGGACATATCATCCTGAACTCCATGCACAAATACCAGCCCCGGCTCCACATCGTGAA
GGCGGATGAGAACAACGGCTTTGGCTCCAAGAACACTGCCTTCTGCACCCATGTCTTCCCCGAGACTGCCTTCATCGCT
GTTACCTCCTACCAAAACCACAAGATCACTCAGCTGAAGATTGAGAACAACCCCTTCGCAAAAGGTTTCCGCGGCAGCG
ATGACATGGAGCTCCACAGGATGTCCAGGATGCAGAGTAAAGAGTACCCAGTTGTTCCCAGGAGCACAGTGAGACAGAA
AGTGTCCTCGAATCACAGCCCCTTCAGCGGTGAGACCAGGGTCCTTTCCACCTCCTCCAACCTGGGCTCCCAGTACCAG
TGTGAGAACGGGGTGTCAAGCACCTCCCAGGACCTGCTGCCGCCCACCAACCCCTACCCGATCTCCCAGGAGCACAGCC
AGATCTACCACTGCACCAAGAGAAAAGATGAGGAATGTTCCACCACCGAGCATCCCTACAAGAAGCCCTACATGGAAAC
TTCACCAGCGGAAGAGGATCCTTTCTACAGGTCCAGTTACCCCCAGCAACAGGGACTGAACACTTCGTACAGGACTGAA
TCAGCCCAGCGCCAGGCATGTATGTACGCCAGCTCTGCTCCCCCCACGGACCCCGTGCCCAGCCTGGAAGACATCAGCT
GTAACACGTGGCCCAGCGTGCCGTCCTACAGCAGTTGCACAGTGTCTGCCATGCAGCCCATGGACAGGTTACCCTACCA
GCATTTCTCTGCCCACTTCACCTCGGGGCCTCTGATGCCCCGGCTCAGCAGCGTGGCCAACCACACGTCCCCCCAGATA
GGAGACACCCATAGCATGTTCCAGCACCAGACCTCAGTTTCTCACCAACCCATTGTGCGGCAGTGTGGACCTCAGACCG
GCATCCAGTCTCCCCCCAGCAGCTTGCAGCCTGCAGAGTTCCTCTATTCCCACGGCGTGCCTCGAACCCTCTCGCCCCA
CCAGTACCACTCGGTGCACGGTGTGGGCATGGTGCCAGAGTGGAGCGAGAACAGCTAACGAGGCAGTCGATGGAAATGG
GAAAAAAAATAAAACGAAATGAAAGAAAAAAGTGAAGGGGGAAATAAGAAAAAAGGAAAGGGAAAACAAAACAAAACAA
AACAAAAAACCAGCACCCCATCAATAACAAAAACGAGAGCGTTTTGCAAGTCTCCTTTAACCGAATGTTCACCGTCAGC
ACTCGAGAGGGATGGACGCTGACCGTGCCACTGGTTGGAAGCACGGATGGAGCACTCATTGGCCATGGCACGATGTGCC
CCCCCCGGTGCTTTGGTTCAGAAGGCAAACCCAGCAGAGCGGAGCGCTGCCCCCACGTCCCCCCAGTCTGTGTCGCTGC
CACAGCCATCCCCTGCCTGGCCCTCCCCTGCCCCTCTCCTTCCCAAAGGGACTCGCGACTCCTGCTGCCTTCCTCAACA
CAGCCAGAGTGCTGGGATGAAAACAACTAGGATGTTAC
CitationLópez-Sánchez C, Bártulos O, Martínez-Campos E, Gañán C, Valenciano AI, García-Martínez V, De Pablo F, Hernández-Sánchez C. Tyrosine hydroxylase is expressed during early heart development and is required for cardiac chamber formation. Cardiovasc Res. 2010 Oct 1;88(1):111-20. Epub 2010 Jun 3.
Copyright© The Author 2010.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204173).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
stage 11
stage 11
stage 12
stage 12
stage 12
stage 12
Heart Tube
control embryo - DMSO vehicle
control embryo - ethanol vehicle

Entry 12

GEISHA IdTBX5.Halilagic.2007Data SourcePublication
Complete cDNA Template Probeshow
CGGGGGGCTGCCGCCATGCGGCCCCACGGTGCGGGGGTTCCTCCGGGCAGGAAGGCGGGGGCCGACCCTGCTGTCCGCA
TCGCAGCGAGGAGCCGCAGCCACGCACCCCCCCGCACGCGCAGTGGGGGATTCGGCGAAGGAAGCTCGTAACATGGCGG
ACACCGAGGAAGGCTTCGGGCTCCCGAGCACGCCGGTTGACTCGGAGGCCAAGGAGCTGCAGGCTGAGGCCAAGCAGGA
TCCCCAGCTGGGGACCACCAGCAAGGCCCCCACCTCTCCACAGGCGGCCTTCACCCAGCAGGGCATGGAGGGGATCAAA
GTGTTTTTGCACGAGCGGGAGCTGTGGCTGAAATTTCACGAGGTGGGGACGGAGATGATCATAACAAAGGCTGGAAGGC
GTATGTTTCCCAGTTACAAAGTGAAGGTCACTGGACTCAATCCAAAAACGAAGTACATACTGTTGATGGATATTGTACC
AGCGGATGACCACAGATACAAATTTGCAGATAATAAATGGTCCGTGACCGGGAAGGCAGAACCGGCCATGCCCGGCCGC
CTCTACGTGCACCCCGACTCCCCCGCTACTGGAGCCCACTGGATGAGGCAGTTGGTTTCCTTCCAGAAGCTCAAGCTCA
CCAACAACCACCTTGACCCCTTCGGACATATCATCCTGAACTCCATGCACAAATACCAGCCCCGGCTCCACATCGTGAA
GGCGGATGAGAACAACGGCTTTGGCTCCAAGAACACTGCCTTCTGCACCCATGTCTTCCCCGAGACTGCCTTCATCGCT
GTTACCTCCTACCAAAACCACAAGATCACTCAGCTGAAGATTGAGAACAACCCCTTCGCAAAAGGTTTCCGCGGCAGCG
ATGACATGGAGCTCCACAGGATGTCCAGGATGCAGAGTAAAGAGTACCCAGTTGTTCCCAGGAGCACAGTGAGACAGAA
AGTGTCCTCGAATCACAGCCCCTTCAGCGGTGAGACCAGGGTCCTTTCCACCTCCTCCAACCTGGGCTCCCAGTACCAG
TGTGAGAACGGGGTGTCAAGCACCTCCCAGGACCTGCTGCCGCCCACCAACCCCTACCCGATCTCCCAGGAGCACAGCC
AGATCTACCACTGCACCAAGAGAAAAGATGAGGAATGTTCCACCACCGAGCATCCCTACAAGAAGCCCTACATGGAAAC
TTCACCAGCGGAAGAGGATCCTTTCTACAGGTCCAGTTACCCCCAGCAACAGGGACTGAACACTTCGTACAGGACTGAA
TCAGCCCAGCGCCAGGCATGTATGTACGCCAGCTCTGCTCCCCCCACGGACCCCGTGCCCAGCCTGGAAGACATCAGCT
GTAACACGTGGCCCAGCGTGCCGTCCTACAGCAGTTGCACAGTGTCTGCCATGCAGCCCATGGACAGGTTACCCTACCA
GCATTTCTCTGCCCACTTCACCTCGGGGCCTCTGATGCCCCGGCTCAGCAGCGTGGCCAACCACACGTCCCCCCAGATA
GGAGACACCCATAGCATGTTCCAGCACCAGACCTCAGTTTCTCACCAACCCATTGTGCGGCAGTGTGGACCTCAGACCG
GCATCCAGTCTCCCCCCAGCAGCTTGCAGCCTGCAGAGTTCCTCTATTCCCACGGCGTGCCTCGAACCCTCTCGCCCCA
CCAGTACCACTCGGTGCACGGTGTGGGCATGGTGCCAGAGTGGAGCGAGAACAGCTAACGAGGCAGTCGATGGAAATGG
GAAAAAAAATAAAACGAAATGAAAGAAAAAAGTGAAGGGGGAAATAAGAAAAAAGGAAAGGGAAAACAAAACAAAACAA
AACAAAAAACCAGCACCCCATCAATAACAAAAACGAGAGCGTTTTGCAAGTCTCCTTTAACCGAATGTTCACCGTCAGC
ACTCGAGAGGGATGGACGCTGACCGTGCCACTGGTTGGAAGCACGGATGGAGCACTCATTGGCCATGGCACGATGTGCC
CCCCCCGGTGCTTTGGTTCAGAAGGCAAACCCAGCAGAGCGGAGCGCTGCCCCCACGTCCCCCCAGTCTGTGTCGCTGC
CACAGCCATCCCCTGCCTGGCCCTCCCCTGCCCCTCTCCTTCCCAAAGGGACTCGCGACTCCTGCTGCCTTCCTCAACA
CAGCCAGAGTGCTGGGATGAAAACAACTAGGATGTTAC
CitationHalilagic A, Ribes V, Ghyselinck NB, Zile MH, Dollé P, Studer M. Retinoids control anterior and dorsal properties in the developing forebrain. Dev Bio 2007 Mar 1;303(1):244-58
CopyrightReprinted with permission from Elsevier. Copyright © 2007 Elsevier B.V. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc #NM_204173). Images are quail, but sequence and map shown are chick.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 14
stage 14
Eye
quail embryo
19
stage 19
Eye
quail embryo

Entry 13

GEISHA IdTBX5.Hirashima.2008Data SourcePublication
Complete cDNA Template Probeshow
CGGGGGGCTGCCGCCATGCGGCCCCACGGTGCGGGGGTTCCTCCGGGCAGGAAGGCGGGGGCCGACCCTGCTGTCCGCA
TCGCAGCGAGGAGCCGCAGCCACGCACCCCCCCGCACGCGCAGTGGGGGATTCGGCGAAGGAAGCTCGTAACATGGCGG
ACACCGAGGAAGGCTTCGGGCTCCCGAGCACGCCGGTTGACTCGGAGGCCAAGGAGCTGCAGGCTGAGGCCAAGCAGGA
TCCCCAGCTGGGGACCACCAGCAAGGCCCCCACCTCTCCACAGGCGGCCTTCACCCAGCAGGGCATGGAGGGGATCAAA
GTGTTTTTGCACGAGCGGGAGCTGTGGCTGAAATTTCACGAGGTGGGGACGGAGATGATCATAACAAAGGCTGGAAGGC
GTATGTTTCCCAGTTACAAAGTGAAGGTCACTGGACTCAATCCAAAAACGAAGTACATACTGTTGATGGATATTGTACC
AGCGGATGACCACAGATACAAATTTGCAGATAATAAATGGTCCGTGACCGGGAAGGCAGAACCGGCCATGCCCGGCCGC
CTCTACGTGCACCCCGACTCCCCCGCTACTGGAGCCCACTGGATGAGGCAGTTGGTTTCCTTCCAGAAGCTCAAGCTCA
CCAACAACCACCTTGACCCCTTCGGACATATCATCCTGAACTCCATGCACAAATACCAGCCCCGGCTCCACATCGTGAA
GGCGGATGAGAACAACGGCTTTGGCTCCAAGAACACTGCCTTCTGCACCCATGTCTTCCCCGAGACTGCCTTCATCGCT
GTTACCTCCTACCAAAACCACAAGATCACTCAGCTGAAGATTGAGAACAACCCCTTCGCAAAAGGTTTCCGCGGCAGCG
ATGACATGGAGCTCCACAGGATGTCCAGGATGCAGAGTAAAGAGTACCCAGTTGTTCCCAGGAGCACAGTGAGACAGAA
AGTGTCCTCGAATCACAGCCCCTTCAGCGGTGAGACCAGGGTCCTTTCCACCTCCTCCAACCTGGGCTCCCAGTACCAG
TGTGAGAACGGGGTGTCAAGCACCTCCCAGGACCTGCTGCCGCCCACCAACCCCTACCCGATCTCCCAGGAGCACAGCC
AGATCTACCACTGCACCAAGAGAAAAGATGAGGAATGTTCCACCACCGAGCATCCCTACAAGAAGCCCTACATGGAAAC
TTCACCAGCGGAAGAGGATCCTTTCTACAGGTCCAGTTACCCCCAGCAACAGGGACTGAACACTTCGTACAGGACTGAA
TCAGCCCAGCGCCAGGCATGTATGTACGCCAGCTCTGCTCCCCCCACGGACCCCGTGCCCAGCCTGGAAGACATCAGCT
GTAACACGTGGCCCAGCGTGCCGTCCTACAGCAGTTGCACAGTGTCTGCCATGCAGCCCATGGACAGGTTACCCTACCA
GCATTTCTCTGCCCACTTCACCTCGGGGCCTCTGATGCCCCGGCTCAGCAGCGTGGCCAACCACACGTCCCCCCAGATA
GGAGACACCCATAGCATGTTCCAGCACCAGACCTCAGTTTCTCACCAACCCATTGTGCGGCAGTGTGGACCTCAGACCG
GCATCCAGTCTCCCCCCAGCAGCTTGCAGCCTGCAGAGTTCCTCTATTCCCACGGCGTGCCTCGAACCCTCTCGCCCCA
CCAGTACCACTCGGTGCACGGTGTGGGCATGGTGCCAGAGTGGAGCGAGAACAGCTAACGAGGCAGTCGATGGAAATGG
GAAAAAAAATAAAACGAAATGAAAGAAAAAAGTGAAGGGGGAAATAAGAAAAAAGGAAAGGGAAAACAAAACAAAACAA
AACAAAAAACCAGCACCCCATCAATAACAAAAACGAGAGCGTTTTGCAAGTCTCCTTTAACCGAATGTTCACCGTCAGC
ACTCGAGAGGGATGGACGCTGACCGTGCCACTGGTTGGAAGCACGGATGGAGCACTCATTGGCCATGGCACGATGTGCC
CCCCCCGGTGCTTTGGTTCAGAAGGCAAACCCAGCAGAGCGGAGCGCTGCCCCCACGTCCCCCCAGTCTGTGTCGCTGC
CACAGCCATCCCCTGCCTGGCCCTCCCCTGCCCCTCTCCTTCCCAAAGGGACTCGCGACTCCTGCTGCCTTCCTCAACA
CAGCCAGAGTGCTGGGATGAAAACAACTAGGATGTTAC
CitationHirashima M, Kobayashi T, Uchikawa M, Kondoh H, Araki M. Anteroventrally localized activity in the optic vesicle plays a crucial role in the optic development. Dev Biol. 2008 May 15;317(2):620-31. doi: 10.1016/j.ydbio.2008.03.010. Epub 2008 Mar 20.
CopyrightCopyright © 2008 Elsevier Inc. All rights reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204173.1
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-11
stage 11
stage 11
Eye
 

Entry 14

GEISHA IdTbx5.Gibson-Brown.1998Data SourcePublication
Complete cDNA Template Probeshow
CGGGGGGCTGCCGCCATGCGGCCCCACGGTGCGGGGGTTCCTCCGGGCAGGAAGGCGGGGGCCGACCCTGCTGTCCGCA
TCGCAGCGAGGAGCCGCAGCCACGCACCCCCCCGCACGCGCAGTGGGGGATTCGGCGAAGGAAGCTCGTAACATGGCGG
ACACCGAGGAAGGCTTCGGGCTCCCGAGCACGCCGGTTGACTCGGAGGCCAAGGAGCTGCAGGCTGAGGCCAAGCAGGA
TCCCCAGCTGGGGACCACCAGCAAGGCCCCCACCTCTCCACAGGCGGCCTTCACCCAGCAGGGCATGGAGGGGATCAAA
GTGTTTTTGCACGAGCGGGAGCTGTGGCTGAAATTTCACGAGGTGGGGACGGAGATGATCATAACAAAGGCTGGAAGGC
GTATGTTTCCCAGTTACAAAGTGAAGGTCACTGGACTCAATCCAAAAACGAAGTACATACTGTTGATGGATATTGTACC
AGCGGATGACCACAGATACAAATTTGCAGATAATAAATGGTCCGTGACCGGGAAGGCAGAACCGGCCATGCCCGGCCGC
CTCTACGTGCACCCCGACTCCCCCGCTACTGGAGCCCACTGGATGAGGCAGTTGGTTTCCTTCCAGAAGCTCAAGCTCA
CCAACAACCACCTTGACCCCTTCGGACATATCATCCTGAACTCCATGCACAAATACCAGCCCCGGCTCCACATCGTGAA
GGCGGATGAGAACAACGGCTTTGGCTCCAAGAACACTGCCTTCTGCACCCATGTCTTCCCCGAGACTGCCTTCATCGCT
GTTACCTCCTACCAAAACCACAAGATCACTCAGCTGAAGATTGAGAACAACCCCTTCGCAAAAGGTTTCCGCGGCAGCG
ATGACATGGAGCTCCACAGGATGTCCAGGATGCAGAGTAAAGAGTACCCAGTTGTTCCCAGGAGCACAGTGAGACAGAA
AGTGTCCTCGAATCACAGCCCCTTCAGCGGTGAGACCAGGGTCCTTTCCACCTCCTCCAACCTGGGCTCCCAGTACCAG
TGTGAGAACGGGGTGTCAAGCACCTCCCAGGACCTGCTGCCGCCCACCAACCCCTACCCGATCTCCCAGGAGCACAGCC
AGATCTACCACTGCACCAAGAGAAAAGATGAGGAATGTTCCACCACCGAGCATCCCTACAAGAAGCCCTACATGGAAAC
TTCACCAGCGGAAGAGGATCCTTTCTACAGGTCCAGTTACCCCCAGCAACAGGGACTGAACACTTCGTACAGGACTGAA
TCAGCCCAGCGCCAGGCATGTATGTACGCCAGCTCTGCTCCCCCCACGGACCCCGTGCCCAGCCTGGAAGACATCAGCT
GTAACACGTGGCCCAGCGTGCCGTCCTACAGCAGTTGCACAGTGTCTGCCATGCAGCCCATGGACAGGTTACCCTACCA
GCATTTCTCTGCCCACTTCACCTCGGGGCCTCTGATGCCCCGGCTCAGCAGCGTGGCCAACCACACGTCCCCCCAGATA
GGAGACACCCATAGCATGTTCCAGCACCAGACCTCAGTTTCTCACCAACCCATTGTGCGGCAGTGTGGACCTCAGACCG
GCATCCAGTCTCCCCCCAGCAGCTTGCAGCCTGCAGAGTTCCTCTATTCCCACGGCGTGCCTCGAACCCTCTCGCCCCA
CCAGTACCACTCGGTGCACGGTGTGGGCATGGTGCCAGAGTGGAGCGAGAACAGCTAACGAGGCAGTCGATGGAAATGG
GAAAAAAAATAAAACGAAATGAAAGAAAAAAGTGAAGGGGGAAATAAGAAAAAAGGAAAGGGAAAACAAAACAAAACAA
AACAAAAAACCAGCACCCCATCAATAACAAAAACGAGAGCGTTTTGCAAGTCTCCTTTAACCGAATGTTCACCGTCAGC
ACTCGAGAGGGATGGACGCTGACCGTGCCACTGGTTGGAAGCACGGATGGAGCACTCATTGGCCATGGCACGATGTGCC
CCCCCCGGTGCTTTGGTTCAGAAGGCAAACCCAGCAGAGCGGAGCGCTGCCCCCACGTCCCCCCAGTCTGTGTCGCTGC
CACAGCCATCCCCTGCCTGGCCCTCCCCTGCCCCTCTCCTTCCCAAAGGGACTCGCGACTCCTGCTGCCTTCCTCAACA
CAGCCAGAGTGCTGGGATGAAAACAACTAGGATGTTAC
CitationGibson-Brown JJ, I Agulnik S, Silver LM, Papaioannou VE. Expression of T-box genes Tbx2-Tbx5 during chick organogenesis. Mech Dev. 1998 Jun;74(1-2):165-9.
CopyrightCopyright © 1998 Elsevier Science Ireland Ltd.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_204173).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 14
Eye
Heart
 
19-24
stage 20
Ear/Otic Placode
Eye
Heart
Wing
 
25-30
stage 25
stage 26
stage 27
Heart
Notochord
trachea
31-44
stage 44
  

Entry 15

GEISHA IdTBX5.Anderson.2020Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
CGGAGATGATCATAACAAAGGCTGGAAGGCGTATGTTTCCCAGTTACAAAGTGAAGGTCACTGGACTCAATCCAAAAAC
GAAGTACATACTGTTGATGGATATTGTACCAGCGGATGACCACAGATACAAATTTGCAGATAATAAATGGTCCGTGACC
GGGAAGGCAGAACCGGCCATGCCCGGCCGCCTCTACGTGCACCCCGACTCCCCCGCTACTGGAGCCCACTGGATGAGGC
AGTTGGTTTCCTTCCAGAAGCTCAAGCTCACCAACAACCACCTTGACCCCTTCGGACATATCATCCTGAACTCCATGCA
CAAATACCAGCCCCGGCTCCACATCGTGAAGGCGGATGAGAACAACGGCTTTGGCTCCAAGAACACTGCCTTCTGCACC
CATGTCTTCCCCGAGACTGCCTTCATCGCTGTTACCTCCTACCAAAACCACAAGATCACTCAGCTGAAGATTGAGAACA
ACCCCTTCGCAAAAGGTTTCCGCGGCAGCGATGACATGGAGCTCCACAGGATGTCCAGGATGCAGAG
CommentsImages Provided by Claire Anderson; Anderson C1, Khan MAF1, Wong F2, Solovieva T1, Oliveira NMM1, Baldock RA3, Tickle C4, Burt DW2, Stern CD1. A strategy to discover new organizers identifies a putative heart organizer. Nat Commun. 2016 Aug 25;7:12656. doi: 10.1038/ncomms12656.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 6
Early Mesoderm
Epiblast
Lateral Plate Mesoderm
Primitive Streak
stage 4+
stage 5-, ventral
7-12
stage 8
stage 9
stage 10
stage 11
stage 12
stage 12
stage 12
Atria
Endocardium
Eye
Heart Tube
Lateral Plate Mesoderm
Myocardium
Sinus Venosus
Splanchnic Mesoderm
Ventricles
section 17
section 29
ventral

Entry 16

GEISHA IdTBX5.Smith.2018Data SourcePublication
Complete cDNA Template Probeshow
CGGGGGGCTGCCGCCATGCGGCCCCACGGTGCGGGGGTTCCTCCGGGCAGGAAGGCGGGGGCCGACCCTGCTGTCCGCA
TCGCAGCGAGGAGCCGCAGCCACGCACCCCCCCGCACGCGCAGTGGGGGATTCGGCGAAGGAAGCTCGTAACATGGCGG
ACACCGAGGAAGGCTTCGGGCTCCCGAGCACGCCGGTTGACTCGGAGGCCAAGGAGCTGCAGGCTGAGGCCAAGCAGGA
TCCCCAGCTGGGGACCACCAGCAAGGCCCCCACCTCTCCACAGGCGGCCTTCACCCAGCAGGGCATGGAGGGGATCAAA
GTGTTTTTGCACGAGCGGGAGCTGTGGCTGAAATTTCACGAGGTGGGGACGGAGATGATCATAACAAAGGCTGGAAGGC
GTATGTTTCCCAGTTACAAAGTGAAGGTCACTGGACTCAATCCAAAAACGAAGTACATACTGTTGATGGATATTGTACC
AGCGGATGACCACAGATACAAATTTGCAGATAATAAATGGTCCGTGACCGGGAAGGCAGAACCGGCCATGCCCGGCCGC
CTCTACGTGCACCCCGACTCCCCCGCTACTGGAGCCCACTGGATGAGGCAGTTGGTTTCCTTCCAGAAGCTCAAGCTCA
CCAACAACCACCTTGACCCCTTCGGACATATCATCCTGAACTCCATGCACAAATACCAGCCCCGGCTCCACATCGTGAA
GGCGGATGAGAACAACGGCTTTGGCTCCAAGAACACTGCCTTCTGCACCCATGTCTTCCCCGAGACTGCCTTCATCGCT
GTTACCTCCTACCAAAACCACAAGATCACTCAGCTGAAGATTGAGAACAACCCCTTCGCAAAAGGTTTCCGCGGCAGCG
ATGACATGGAGCTCCACAGGATGTCCAGGATGCAGAGTAAAGAGTACCCAGTTGTTCCCAGGAGCACAGTGAGACAGAA
AGTGTCCTCGAATCACAGCCCCTTCAGCGGTGAGACCAGGGTCCTTTCCACCTCCTCCAACCTGGGCTCCCAGTACCAG
TGTGAGAACGGGGTGTCAAGCACCTCCCAGGACCTGCTGCCGCCCACCAACCCCTACCCGATCTCCCAGGAGCACAGCC
AGATCTACCACTGCACCAAGAGAAAAGATGAGGAATGTTCCACCACCGAGCATCCCTACAAGAAGCCCTACATGGAAAC
TTCACCAGCGGAAGAGGATCCTTTCTACAGGTCCAGTTACCCCCAGCAACAGGGACTGAACACTTCGTACAGGACTGAA
TCAGCCCAGCGCCAGGCATGTATGTACGCCAGCTCTGCTCCCCCCACGGACCCCGTGCCCAGCCTGGAAGACATCAGCT
GTAACACGTGGCCCAGCGTGCCGTCCTACAGCAGTTGCACAGTGTCTGCCATGCAGCCCATGGACAGGTTACCCTACCA
GCATTTCTCTGCCCACTTCACCTCGGGGCCTCTGATGCCCCGGCTCAGCAGCGTGGCCAACCACACGTCCCCCCAGATA
GGAGACACCCATAGCATGTTCCAGCACCAGACCTCAGTTTCTCACCAACCCATTGTGCGGCAGTGTGGACCTCAGACCG
GCATCCAGTCTCCCCCCAGCAGCTTGCAGCCTGCAGAGTTCCTCTATTCCCACGGCGTGCCTCGAACCCTCTCGCCCCA
CCAGTACCACTCGGTGCACGGTGTGGGCATGGTGCCAGAGTGGAGCGAGAACAGCTAACGAGGCAGTCGATGGAAATGG
GAAAAAAAATAAAACGAAATGAAAGAAAAAAGTGAAGGGGGAAATAAGAAAAAAGGAAAGGGAAAACAAAACAAAACAA
AACAAAAAACCAGCACCCCATCAATAACAAAAACGAGAGCGTTTTGCAAGTCTCCTTTAACCGAATGTTCACCGTCAGC
ACTCGAGAGGGATGGACGCTGACCGTGCCACTGGTTGGAAGCACGGATGGAGCACTCATTGGCCATGGCACGATGTGCC
CCCCCCGGTGCTTTGGTTCAGAAGGCAAACCCAGCAGAGCGGAGCGCTGCCCCCACGTCCCCCCAGTCTGTGTCGCTGC
CACAGCCATCCCCTGCCTGGCCCTCCCCTGCCCCTCTCCTTCCCAAAGGGACTCGCGACTCCTGCTGCCTTCCTCAACA
CAGCCAGAGTGCTGGGATGAAAACAACTAGGATGTTAC
CitationJonathan N Smith, Heather M Walker, Hannah Thompson, J Martin Collinson, Neil Vargesson, Lynda Erskine. Lens-regulated retinoic acid signalling controls expansion of the developing eye. Development. 2018 Oct 10;145(19):dev167171. DOI: 10.1242/dev.167171.
CopyrightCopyright © 2018. Published by The Company of Biologists Ltd.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204173).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-23
stage 23
Retina
 
all
 
  

Entry 17

GEISHA IdTBX5.Anderson.2019Data SourcePublication
Complete cDNA Template Probeshow
CGGGGGGCTGCCGCCATGCGGCCCCACGGTGCGGGGGTTCCTCCGGGCAGGAAGGCGGGGGCCGACCCTGCTGTCCGCA
TCGCAGCGAGGAGCCGCAGCCACGCACCCCCCCGCACGCGCAGTGGGGGATTCGGCGAAGGAAGCTCGTAACATGGCGG
ACACCGAGGAAGGCTTCGGGCTCCCGAGCACGCCGGTTGACTCGGAGGCCAAGGAGCTGCAGGCTGAGGCCAAGCAGGA
TCCCCAGCTGGGGACCACCAGCAAGGCCCCCACCTCTCCACAGGCGGCCTTCACCCAGCAGGGCATGGAGGGGATCAAA
GTGTTTTTGCACGAGCGGGAGCTGTGGCTGAAATTTCACGAGGTGGGGACGGAGATGATCATAACAAAGGCTGGAAGGC
GTATGTTTCCCAGTTACAAAGTGAAGGTCACTGGACTCAATCCAAAAACGAAGTACATACTGTTGATGGATATTGTACC
AGCGGATGACCACAGATACAAATTTGCAGATAATAAATGGTCCGTGACCGGGAAGGCAGAACCGGCCATGCCCGGCCGC
CTCTACGTGCACCCCGACTCCCCCGCTACTGGAGCCCACTGGATGAGGCAGTTGGTTTCCTTCCAGAAGCTCAAGCTCA
CCAACAACCACCTTGACCCCTTCGGACATATCATCCTGAACTCCATGCACAAATACCAGCCCCGGCTCCACATCGTGAA
GGCGGATGAGAACAACGGCTTTGGCTCCAAGAACACTGCCTTCTGCACCCATGTCTTCCCCGAGACTGCCTTCATCGCT
GTTACCTCCTACCAAAACCACAAGATCACTCAGCTGAAGATTGAGAACAACCCCTTCGCAAAAGGTTTCCGCGGCAGCG
ATGACATGGAGCTCCACAGGATGTCCAGGATGCAGAGTAAAGAGTACCCAGTTGTTCCCAGGAGCACAGTGAGACAGAA
AGTGTCCTCGAATCACAGCCCCTTCAGCGGTGAGACCAGGGTCCTTTCCACCTCCTCCAACCTGGGCTCCCAGTACCAG
TGTGAGAACGGGGTGTCAAGCACCTCCCAGGACCTGCTGCCGCCCACCAACCCCTACCCGATCTCCCAGGAGCACAGCC
AGATCTACCACTGCACCAAGAGAAAAGATGAGGAATGTTCCACCACCGAGCATCCCTACAAGAAGCCCTACATGGAAAC
TTCACCAGCGGAAGAGGATCCTTTCTACAGGTCCAGTTACCCCCAGCAACAGGGACTGAACACTTCGTACAGGACTGAA
TCAGCCCAGCGCCAGGCATGTATGTACGCCAGCTCTGCTCCCCCCACGGACCCCGTGCCCAGCCTGGAAGACATCAGCT
GTAACACGTGGCCCAGCGTGCCGTCCTACAGCAGTTGCACAGTGTCTGCCATGCAGCCCATGGACAGGTTACCCTACCA
GCATTTCTCTGCCCACTTCACCTCGGGGCCTCTGATGCCCCGGCTCAGCAGCGTGGCCAACCACACGTCCCCCCAGATA
GGAGACACCCATAGCATGTTCCAGCACCAGACCTCAGTTTCTCACCAACCCATTGTGCGGCAGTGTGGACCTCAGACCG
GCATCCAGTCTCCCCCCAGCAGCTTGCAGCCTGCAGAGTTCCTCTATTCCCACGGCGTGCCTCGAACCCTCTCGCCCCA
CCAGTACCACTCGGTGCACGGTGTGGGCATGGTGCCAGAGTGGAGCGAGAACAGCTAACGAGGCAGTCGATGGAAATGG
GAAAAAAAATAAAACGAAATGAAAGAAAAAAGTGAAGGGGGAAATAAGAAAAAAGGAAAGGGAAAACAAAACAAAACAA
AACAAAAAACCAGCACCCCATCAATAACAAAAACGAGAGCGTTTTGCAAGTCTCCTTTAACCGAATGTTCACCGTCAGC
ACTCGAGAGGGATGGACGCTGACCGTGCCACTGGTTGGAAGCACGGATGGAGCACTCATTGGCCATGGCACGATGTGCC
CCCCCCGGTGCTTTGGTTCAGAAGGCAAACCCAGCAGAGCGGAGCGCTGCCCCCACGTCCCCCCAGTCTGTGTCGCTGC
CACAGCCATCCCCTGCCTGGCCCTCCCCTGCCCCTCTCCTTCCCAAAGGGACTCGCGACTCCTGCTGCCTTCCTCAACA
CAGCCAGAGTGCTGGGATGAAAACAACTAGGATGTTAC
CitationAnderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
CopyrightCopyright © 2019 Elsevier Inc. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204173).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
Ventricles
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.961

Mouse

EmageMGI:102541
EurexpressMGI:102541
MGI GXDMGI:102541

Frog

Xenbase486854

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-991124-7, ZDB-GENE-060601-2
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