GEISHA - A Chicken Embryo Gene Expression Database
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ATP2A2
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolATP2A2
Official Full NameATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2
CGNC ID49809
also known asSERCA2, sarcoplasmic/endoplasmic reticulum calcium ATPase 2|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2|SR Ca(2+)-ATPase 2|calcium pump 2|calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform|endoplasmic reticulum class 1/2 Ca(2+) ATPase, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 calcium pump 2 (SERCA2), SR Ca(2+)-ATPase 2, Endoplasmic reticulum class 1/2 Ca(2+) ATPase, Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_001271973
PolypeptideNP_001258902
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human488ENSG00000174437MIM:101900MIM:108740
Mouse11938ENSMUSG00000029467All phenotypic alleles (5):Targeted, knock-out(2) Targeted, other(3) MGI:88110
Xenopus100489059, 4462291012932
Zebrafish393940, 568265ENSDARG00000029439, ENSDARG00000005122ZDB-GENE-040426-702, ZDB-GENE-030131-867ZFIN:ZDB-GENE-040426-702, ZFIN:ZDB-GENE-030131-867
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene396446
Ensembl GeneENSGALG00000003835
KEGGgga:396446
GEISHA IdATP2A2.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5’-GCCCCTGCATTGAAGAAAGC-3’
Reverse cDNA Template Primer5’-AATTAACCCTCACTAAAGGTTGCGTCACGTTTAAAGGCG-3’cDNA Template Length777
Complete cDNA Template Probeshow
GCCCCTGCATTGAAGAAAGCGGAAATTGGGATCGCTATGGGCTCTGGTACTGCAGTGGCTAAAACTGCTTCTGAAATGG
TTTTAGCAGATGATAATTTTTCAACTATTGTAGCTGCTGTGGAAGAAGGGCGTGCAATTTACAACAACATGAAGCAGTT
CATCCGTTACTTGATTTCTTCCAATGTTGGAGAAGTTGTTTGCATCTTCTTGACTGCTGCCCTGGGTTTTCCTGAAGCT
CTGATCCCTGTCCAGCTGTTATGGGTGAACCTTGTGACGGATGGTCTCCCTGCTACTGCTCTGGGCTTTAATCCTCCTG
ATCTCGATATCATGAACAAACCACCCCGCAACCCTAAGGAGCCACTGATCAGTGGGTGGCTCTTCTTCCGCTACCTGGC
AATTGGATGTTACGTTGGTGCTGCCACTGTGGGTGCTGCTGCTTGGTGGTTTATTGCTGCTGATGGTGGTCCAAGAGTT
ACCTTTTACCAGCTGAGCCATTTTCTGCAGTGCAAAGAGGACAACCCAGACTTTTCTGGTGTCGACTGTGTGGTTTTTG
AGTCTCCATATCCAATGACAATGGCTCTCTCTGTACTTGTCACCATAGAGATGTGCAATGCCCTCAACAGTCTGTCAGA
AAATCAGTCCCTAATGAGGATGCCTCCATGGGAGAATATCTGGCTGGTGGGAGCGATTTGCTTGTCCATGTCACTCCAC
TTCCTTATCCTCTATGTGGAACCGCTGCCGATTATCTTCCAGATCACGCCTTTAAACGTGACGCAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
Epiblast
Extraembryonic Mesoderm
Primitive Streak
 
7-12
stage 8
stage 10
Anterior Intestinal Portal
Forebrain
Head Mesenchyme
Heart Tube
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Primitive Streak
Somites
extraembryonic mesoderm
 
13-18
stage 14
stage 18
stage 18
Forebrain
Foregut
Head Mesenchyme
Heart
Hindbrain
Midbrain
Myotome
Neural Plate/Tube
Pharyngeal Arches and Clefts
Proepicardium
Sclerotome
Sinus Venosus
Somites
Widespread Expression
Strong expression in heart and myotome, widespread expression
19-24
stage 19
stage 22
stage 23
stage 23
stage 23
stage 23
Atria
Eye
Liver
Myotome
Nephric Ducts
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Ventricles
Widespread Expression
Strong expression in myotome and heart; lesser widespread expression
25-26
stage 26
stage 26
stage 26
stage 26
stage 26
Atria
Ear/Otic Placode
Foregut
Head Mesenchyme
Leg Mesenchyme
Liver
Mesonephros
Myotome
Pharyngeal Arches and Clefts
Sinus Venosus
Spinal Cord
Spinal Ganglia and Nerves
Ventricles
Wing Mesenchyme
 

Mouse

EmageMGI:88110
MGI GXDMGI:88110

Frog

Xenbase1012932

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040426-702, ZDB-GENE-030131-867
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