GEISHA - A Chicken Embryo Gene Expression Database
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GATA3
GATA binding protein 3

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolGATA3
Official Full NameGATA binding protein 3
CGNC ID5080
also known ascGATA-3, GATA-binding factor 3|GATA-3|NF-E1|transcription factor NF-E1c, GATA-3, Transcription factor NF-E1C, GATA-binding factor 3
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNANM_001008444
PolypeptideNP_001008444
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly40962FBgn0001138
Human2625ENSG00000107485MIM:146255MIM:131320
Mouse14462ENSMUSG00000015619All phenotypic alleles (12):Targeted, knock-out(5) Targeted, other(7) MGI:95663
Xenopus448391, 399445485929
Zebrafish30458ENSDARG00000016526ZDB-GENE-990415-82ZFIN:ZDB-GENE-990415-82
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene419106
Ensembl Gene
KEGGgga:419106

Entry 1

GEISHA IdGata3.Sheng.1999Data SourcePublication
Complete cDNA Template Probeshow
GACTCTGCACAGCCGTCCCCCCCTCCCTTCGCCAGCCTCGCTGAGGAGGAGGAGGAGGAGGTGGAAGAGCAGCGAGCGC
GGAAGATGGAGGTCTCCACGGACCAACCGCGGTGGGTGAGCCACCACCACCCGGCCGTGCTCAATGGGCAGCACCCGGA
CTCCCACCACCCCACTCTTGGCCATACCTACATGGACCCCACGCAGTATCCTCTCGCCGAGGAAGTGGATGTACTTTTT
AATATCGACGGACAAGGCAACCCCGTGCCTCCGTATTACGGCAACTCCGTGCGAGCCACCGTGCAGCGGTACCCCACGG
CCCATCACGGCAGCCAGGTGTGCCGGCCCCCTCTGCTGCATGGTTCGCTGCCGTGGCTGGACGGGAGCAAAGCGCTGAG
CAGCCACCACAGCGCTTCCCCTTGGAACCTCAGCCCTTTTTCCAAGACCTCCATCCATCACAGCTCGCCGGGACCCCTC
TCCGTTTACCCGCCTGCTTCTTCCTCCACTTTATCCGCCGGTCACTCCAGCCCGCACCTTTTCACCTTCCCACCGACCC
CTCCTAAAGATGTGTCCCCGGATCCGTCCATCTCCACTCCTGGCTCCACCGGCTCCACCCGGCAGGATGAGAAGGAATG
CATCAAATATCAGGTGTCCCTGGCTGACACCATGAAGCTGGAGTCGTCTCACTCTAGGAGCAGCATGG
CitationSheng, G., Stern, C. Gata2 and Gata3: novel markers for early embryonic polarity and for non-neural ectoderm in the chick embryo. 1999 Mech. Dev. 87,213-216.
CopyrightReprinted with permission from Elsevier. Copyright © 1999 Elsevier B.V. All rights reserved.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 5
Epiblast
Surface Ectoderm
All embryos are viewed from the dorsal side unless specifed and oriented with anterior to the top.
7-12
stage 7
stage 8
stage 8
stage 11
stage 11
stage 11
stage 11
Ear/Otic Placcode
Endoderm, early
Eye
Foregut
Intermediate Mesoderm
Lens
Retina
Surface Ectoderm
otic placode
13-18
stage 18
stage 18
Ear/Otic Placcode
Eye
Face Mesenchyme
Lens
Nephric Ducts
Pharyngeal Arches and Clefts
Retina
 
19-24
stage 22
Blood Vessels
Gut
Renal
Wing
 
25-28
stage 28
Duodenum
 

Entry 2

GEISHA IdGata3.Bothe.2006Data SourcePublication
Complete cDNA Template Probeshow
TTTTAAATTTTTGGAACCGATCATTTCTCACCACCACCCCCCTCTTCCCTCCGATTACAAACCAACCTAACCCCAACCT
CGCCGAAGCTCTTTCCCCACCCCGACTCTGCACAGCCGTCCCCCCCTCCCTTCGCCAGCCTCGCTGAGGAGGAGGAGGA
GGAGGTGGAAGAGCAGCGAGCGCGGAAGATGGAGGTCTCCACGGACCAACCGCGGTGGGTGAGCCACCACCACCCGGCC
GTGCTCAATGGGCAGCACCCGGACTCCCACCACCCCACTCTTGGCCATACCTACATGGACCCCACGCAGTATCCTCTCG
CCGAGGAAGTGGATGTACTTTTTAATATCGACGGACAAGGCAACCCCGTGCCTCCGTATTACGGCAACTCCGTGCGAGC
CACCGTGCAGCGGTACCCCACGGCCCATCACGGCAGCCAGGTGTGCCGGCCCCCTCTGCTGCATGGTTCGCTGCCGTGG
CTGGACGGGAGCAAAGCGCTGAGCAGCCACCACAGCGCTTCCCCTTGGAACCTCAGCCCTTTTTCCAAGACCTCCATCC
ATCACAGCTCGCCGGGACCCCTCTCCGTTTACCCGCCTGCTTCTTCCTCCACTTTATCCGCCGGTCACTCCAGCCCGCA
CCTTTTCACCTTCCCACCGACCCCTCCTAAAGATGTGTCCCCGGATCCGTCCATCTCCACTCCTGGCTCCACCGGCTCC
ACCCGGCAGGATGAGAAGGAATGCATCAAATATCAGGTGTCCCTGGCTGACACCATGAAGCTGGAGTCGTCTCACTCTA
GGAGCAGCATGGCCTCGTTAGGAGGAGCCACCTCCTCCGCTCATCACCCCATCACTACTTACCCACCGTATGTCCCCGA
ATATAGCTCTGGACTTTTTCCCCCCAGCAGCCTCTTAGGAGGATCGCCTACCGGGTTCGGGTGCAAATCACGACCGAAA
GCGCGGTCGAGCACAGAAGGCAGGGAGTGTGTAAATTGTGGGGCTACCTCAACCCCTCTGTGGAGAAGAGACGGCACCG
GGCACTACTTGTGTAACGCCTGTGGACTCTATCACAAAATGAATGGGCAGAACCGACCCCTGATTAAACCCAAGAGAAG
GCTGTCTGCAGCCAGGAGGGCGGGCACGTCCTGTGCTAACTGTCAGACCACCACCACCACCCTGTGGAGGAGAAATGCC
AACGGCGATCCTGTCTGTAATGCCTGTGGGCTCTACTACAAGCTGCACAATATTAACAGACCCCTGACTATGAAGAAAG
AAGGAATTCAGACCAGAAACCGAAAAATGTCTAGCAAATCCAAAAAGTGCAAAAAGGTCCATGACAACCTTGAAGACTT
TCCCAAGAGCAGCTCCTTTAACCCCGCCGCCCTCTCCAGACACATGTCCTCTATCAGCCACATTTCACCCTTCAGTCAC
TCCAGCCACATGCTGACTACACCGACACCGATGCATCCTCCATCCAGCCTCTCCTTTGGACCTCACCATCCCTCCAGCA
TGGTCACTGCCATGGGTTAGTGAGAGACTCCCCTGCTGAATGCTTACGGTCTCAAAATGAGATTTACTTTATATACTTG
CATTTTTGCAGGCGTGTGGTTATGGGTCTGATGTCCCAAATCAAATGGGAGGGGGAAAAAGAAAAAAAAAAGAATAAAA
AGAATAAAAATAAAAATGTTATTTGAAGGCGTAAGAGCAAAAAAAATA
CitationBothe I, Dietrich S. The molecular setup of the avian head mesoderm and its implication for craniofacial myogenesis. Dev Dyn. 2006 Oct;235(10):2845-60.
CopyrightCopyright © 2006 Wiley-Liss, Inc.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 10
stage 10
Anterior Intestinal Portal
Ear/Otic Placcode
Ectoderm
Foregut
Lateral Plate Mesoderm
 

Entry 3

GEISHA IdGata-3.Jaffredo.2005Data SourcePublication
Complete cDNA Template Probeshow
TTTTAAATTTTTGGAACCGATCATTTCTCACCACCACCCCCCTCTTCCCTCCGATTACAAACCAACCTAACCCCAACCT
CGCCGAAGCTCTTTCCCCACCCCGACTCTGCACAGCCGTCCCCCCCTCCCTTCGCCAGCCTCGCTGAGGAGGAGGAGGA
GGAGGTGGAAGAGCAGCGAGCGCGGAAGATGGAGGTCTCCACGGACCAACCGCGGTGGGTGAGCCACCACCACCCGGCC
GTGCTCAATGGGCAGCACCCGGACTCCCACCACCCCACTCTTGGCCATACCTACATGGACCCCACGCAGTATCCTCTCG
CCGAGGAAGTGGATGTACTTTTTAATATCGACGGACAAGGCAACCCCGTGCCTCCGTATTACGGCAACTCCGTGCGAGC
CACCGTGCAGCGGTACCCCACGGCCCATCACGGCAGCCAGGTGTGCCGGCCCCCTCTGCTGCATGGTTCGCTGCCGTGG
CTGGACGGGAGCAAAGCGCTGAGCAGCCACCACAGCGCTTCCCCTTGGAACCTCAGCCCTTTTTCCAAGACCTCCATCC
ATCACAGCTCGCCGGGACCCCTCTCCGTTTACCCGCCTGCTTCTTCCTCCACTTTATCCGCCGGTCACTCCAGCCCGCA
CCTTTTCACCTTCCCACCGACCCCTCCTAAAGATGTGTCCCCGGATCCGTCCATCTCCACTCCTGGCTCCACCGGCTCC
ACCCGGCAGGATGAGAAGGAATGCATCAAATATCAGGTGTCCCTGGCTGACACCATGAAGCTGGAGTCGTCTCACTCTA
GGAGCAGCATGGCCTCGTTAGGAGGAGCCACCTCCTCCGCTCATCACCCCATCACTACTTACCCACCGTATGTCCCCGA
ATATAGCTCTGGACTTTTTCCCCCCAGCAGCCTCTTAGGAGGATCGCCTACCGGGTTCGGGTGCAAATCACGACCGAAA
GCGCGGTCGAGCACAGAAGGCAGGGAGTGTGTAAATTGTGGGGCTACCTCAACCCCTCTGTGGAGAAGAGACGGCACCG
GGCACTACTTGTGTAACGCCTGTGGACTCTATCACAAAATGAATGGGCAGAACCGACCCCTGATTAAACCCAAGAGAAG
GCTGTCTGCAGCCAGGAGGGCGGGCACGTCCTGTGCTAACTGTCAGACCACCACCACCACCCTGTGGAGGAGAAATGCC
AACGGCGATCCTGTCTGTAATGCCTGTGGGCTCTACTACAAGCTGCACAATATTAACAGACCCCTGACTATGAAGAAAG
AAGGAATTCAGACCAGAAACCGAAAAATGTCTAGCAAATCCAAAAAGTGCAAAAAGGTCCATGACAACCTTGAAGACTT
TCCCAAGAGCAGCTCCTTTAACCCCGCCGCCCTCTCCAGACACATGTCCTCTATCAGCCACATTTCACCCTTCAGTCAC
TCCAGCCACATGCTGACTACACCGACACCGATGCATCCTCCATCCAGCCTCTCCTTTGGACCTCACCATCCCTCCAGCA
TGGTCACTGCCATGGGTTAGTGAGAGACTCCCCTGCTGAATGCTTACGGTCTCAAAATGAGATTTACTTTATATACTTG
CATTTTTGCAGGCGTGTGGTTATGGGTCTGATGTCCCAAATCAAATGGGAGGGGGAAAAAGAAAAAAAAAAGAATAAAA
AGAATAAAAATAAAAATGTTATTTGAAGGCGTAAGAGCAAAAAAAATAATAATAAAAAAAGAAAAAAACTACAAAAAGC
ACAAAAAAGGAAAAAAAAAGAAAAAAAAAAAAAAAA
CitationJaffredo T, Bollerot K, Sugiyama D, Gautier R, Drevon C (2005). Tracing the hemangioblast during embryogenesis: developmental relationships between endothelial and hematopoietic cells. Int J Dev Biol. 2005;49(2-3):269-77.
Copyright"Reprinted from Int. J. Dev. Biol., 49,Jaffredo T, Bollerot K, Sugiyama D, Gautier R, Drevon C , Tracing the hemangioblast during embryogenesis: developmental relationships between endothelial and hematopoietic cells, 269-77, Copyright (2005), with permission from Copyright © 2005 UBC Press". All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_001008444).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
Aorta
Blood
 
31-44
stage 44
Aorta
Blood
Comparison with other genes

Entry 4

GEISHA IdGATA3.McLarren.2003Data SourcePublication
Complete cDNA Template Probeshow
TTTTAAATTTTTGGAACCGATCATTTCTCACCACCACCCCCCTCTTCCCTCCGATTACAAACCAACCTAACCCCAACCT
CGCCGAAGCTCTTTCCCCACCCCGACTCTGCACAGCCGTCCCCCCCTCCCTTCGCCAGCCTCGCTGAGGAGGAGGAGGA
GGAGGTGGAAGAGCAGCGAGCGCGGAAGATGGAGGTCTCCACGGACCAACCGCGGTGGGTGAGCCACCACCACCCGGCC
GTGCTCAATGGGCAGCACCCGGACTCCCACCACCCCACTCTTGGCCATACCTACATGGACCCCACGCAGTATCCTCTCG
CCGAGGAAGTGGATGTACTTTTTAATATCGACGGACAAGGCAACCCCGTGCCTCCGTATTACGGCAACTCCGTGCGAGC
CACCGTGCAGCGGTACCCCACGGCCCATCACGGCAGCCAGGTGTGCCGGCCCCCTCTGCTGCATGGTTCGCTGCCGTGG
CTGGACGGGAGCAAAGCGCTGAGCAGCCACCACAGCGCTTCCCCTTGGAACCTCAGCCCTTTTTCCAAGACCTCCATCC
ATCACAGCTCGCCGGGACCCCTCTCCGTTTACCCGCCTGCTTCTTCCTCCACTTTATCCGCCGGTCACTCCAGCCCGCA
CCTTTTCACCTTCCCACCGACCCCTCCTAAAGATGTGTCCCCGGATCCGTCCATCTCCACTCCTGGCTCCACCGGCTCC
ACCCGGCAGGATGAGAAGGAATGCATCAAATATCAGGTGTCCCTGGCTGACACCATGAAGCTGGAGTCGTCTCACTCTA
GGAGCAGCATGGCCTCGTTAGGAGGAGCCACCTCCTCCGCTCATCACCCCATCACTACTTACCCACCGTATGTCCCCGA
ATATAGCTCTGGACTTTTTCCCCCCAGCAGCCTCTTAGGAGGATCGCCTACCGGGTTCGGGTGCAAATCACGACCGAAA
GCGCGGTCGAGCACAGAAGGCAGGGAGTGTGTAAATTGTGGGGCTACCTCAACCCCTCTGTGGAGAAGAGACGGCACCG
GGCACTACTTGTGTAACGCCTGTGGACTCTATCACAAAATGAATGGGCAGAACCGACCCCTGATTAAACCCAAGAGAAG
GCTGTCTGCAGCCAGGAGGGCGGGCACGTCCTGTGCTAACTGTCAGACCACCACCACCACCCTGTGGAGGAGAAATGCC
AACGGCGATCCTGTCTGTAATGCCTGTGGGCTCTACTACAAGCTGCACAATATTAACAGACCCCTGACTATGAAGAAAG
AAGGAATTCAGACCAGAAACCGAAAAATGTCTAGCAAATCCAAAAAGTGCAAAAAGGTCCATGACAACCTTGAAGACTT
TCCCAAGAGCAGCTCCTTTAACCCCGCCGCCCTCTCCAGACACATGTCCTCTATCAGCCACATTTCACCCTTCAGTCAC
TCCAGCCACATGCTGACTACACCGACACCGATGCATCCTCCATCCAGCCTCTCCTTTGGACCTCACCATCCCTCCAGCA
TGGTCACTGCCATGGGTTAGTGAGAGACTCCCCTGCTGAATGCTTACGGTCTCAAAATGAGATTTACTTTATATACTTG
CATTTTTGCAGGCGTGTGGTTATGGGTCTGATGTCCCAAATCAAATGGGAGGGGGAAAAAGAAAAAAAAAAGAATAAAA
AGAATAAAAATAAAAATGTTATTTGAAGGCGTAAGAGCAAAAAAAATAATAATAAAAAAAGAAAAAAACTACAAAAAGC
ACAAAAAAGGAAAAAAAAAGAAAAAAAAAAAAAAAA
CitationMcLarren KW, Litsiou A, Streit A. DLX5 positions the neural crest and preplacode region at the border of the neural plate. Dev Biol. 2003 Jul 1;259(1):34-47.
CopyrightCopyright © 2003 Elsevier Science (USA). All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_001008444).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7
stage 7
stage 7
Ectoderm
Nonneural Ectoderm

Entry 5

GEISHA IdGATA3.Gibson.2011Data SourcePublication
Complete cDNA Template Probeshow
TTTTAAATTTTTGGAACCGATCATTTCTCACCACCACCCCCCTCTTCCCTCCGATTACAAACCAACCTAACCCCAACCT
CGCCGAAGCTCTTTCCCCACCCCGACTCTGCACAGCCGTCCCCCCCTCCCTTCGCCAGCCTCGCTGAGGAGGAGGAGGA
GGAGGTGGAAGAGCAGCGAGCGCGGAAGATGGAGGTCTCCACGGACCAACCGCGGTGGGTGAGCCACCACCACCCGGCC
GTGCTCAATGGGCAGCACCCGGACTCCCACCACCCCACTCTTGGCCATACCTACATGGACCCCACGCAGTATCCTCTCG
CCGAGGAAGTGGATGTACTTTTTAATATCGACGGACAAGGCAACCCCGTGCCTCCGTATTACGGCAACTCCGTGCGAGC
CACCGTGCAGCGGTACCCCACGGCCCATCACGGCAGCCAGGTGTGCCGGCCCCCTCTGCTGCATGGTTCGCTGCCGTGG
CTGGACGGGAGCAAAGCGCTGAGCAGCCACCACAGCGCTTCCCCTTGGAACCTCAGCCCTTTTTCCAAGACCTCCATCC
ATCACAGCTCGCCGGGACCCCTCTCCGTTTACCCGCCTGCTTCTTCCTCCACTTTATCCGCCGGTCACTCCAGCCCGCA
CCTTTTCACCTTCCCACCGACCCCTCCTAAAGATGTGTCCCCGGATCCGTCCATCTCCACTCCTGGCTCCACCGGCTCC
ACCCGGCAGGATGAGAAGGAATGCATCAAATATCAGGTGTCCCTGGCTGACACCATGAAGCTGGAGTCGTCTCACTCTA
GGAGCAGCATGGCCTCGTTAGGAGGAGCCACCTCCTCCGCTCATCACCCCATCACTACTTACCCACCGTATGTCCCCGA
ATATAGCTCTGGACTTTTTCCCCCCAGCAGCCTCTTAGGAGGATCGCCTACCGGGTTCGGGTGCAAATCACGACCGAAA
GCGCGGTCGAGCACAGAAGGCAGGGAGTGTGTAAATTGTGGGGCTACCTCAACCCCTCTGTGGAGAAGAGACGGCACCG
GGCACTACTTGTGTAACGCCTGTGGACTCTATCACAAAATGAATGGGCAGAACCGACCCCTGATTAAACCCAAGAGAAG
GCTGTCTGCAGCCAGGAGGGCGGGCACGTCCTGTGCTAACTGTCAGACCACCACCACCACCCTGTGGAGGAGAAATGCC
AACGGCGATCCTGTCTGTAATGCCTGTGGGCTCTACTACAAGCTGCACAATATTAACAGACCCCTGACTATGAAGAAAG
AAGGAATTCAGACCAGAAACCGAAAAATGTCTAGCAAATCCAAAAAGTGCAAAAAGGTCCATGACAACCTTGAAGACTT
TCCCAAGAGCAGCTCCTTTAACCCCGCCGCCCTCTCCAGACACATGTCCTCTATCAGCCACATTTCACCCTTCAGTCAC
TCCAGCCACATGCTGACTACACCGACACCGATGCATCCTCCATCCAGCCTCTCCTTTGGACCTCACCATCCCTCCAGCA
TGGTCACTGCCATGGGTTAGTGAGAGACTCCCCTGCTGAATGCTTACGGTCTCAAAATGAGATTTACTTTATATACTTG
CATTTTTGCAGGCGTGTGGTTATGGGTCTGATGTCCCAAATCAAATGGGAGGGGGAAAAAGAAAAAAAAAAGAATAAAA
AGAATAAAAATAAAAATGTTATTTGAAGGCGTAAGAGCAAAAAAAATAATAATAAAAAAAGAAAAAAACTACAAAAAGC
ACAAAAAAGGAAAAAAAAAGAAAAAAAAAAAAAAAA
CitationGibson A, Robinson N, Streit A, Sheng G, Stern CD. Regulation of programmed cell death during neural induction in the chick embryo.Int J Dev Biol. 2011;55(1):33-43.
Copyright"Reprinted from Int. J. Dev. Biol., 55(1), Copyright (2011), with permission from the authors and IJDB, Copyright © 2002 UBC Press". All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_001008444).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
stage 6
stage 6
Epiblast
 

Entry 6

GEISHA IdGATA3.Christophorou.2010Data SourcePublication
Complete cDNA Template Probeshow
TTTTAAATTTTTGGAACCGATCATTTCTCACCACCACCCCCCTCTTCCCTCCGATTACAAACCAACCTAACCCCAACCT
CGCCGAAGCTCTTTCCCCACCCCGACTCTGCACAGCCGTCCCCCCCTCCCTTCGCCAGCCTCGCTGAGGAGGAGGAGGA
GGAGGTGGAAGAGCAGCGAGCGCGGAAGATGGAGGTCTCCACGGACCAACCGCGGTGGGTGAGCCACCACCACCCGGCC
GTGCTCAATGGGCAGCACCCGGACTCCCACCACCCCACTCTTGGCCATACCTACATGGACCCCACGCAGTATCCTCTCG
CCGAGGAAGTGGATGTACTTTTTAATATCGACGGACAAGGCAACCCCGTGCCTCCGTATTACGGCAACTCCGTGCGAGC
CACCGTGCAGCGGTACCCCACGGCCCATCACGGCAGCCAGGTGTGCCGGCCCCCTCTGCTGCATGGTTCGCTGCCGTGG
CTGGACGGGAGCAAAGCGCTGAGCAGCCACCACAGCGCTTCCCCTTGGAACCTCAGCCCTTTTTCCAAGACCTCCATCC
ATCACAGCTCGCCGGGACCCCTCTCCGTTTACCCGCCTGCTTCTTCCTCCACTTTATCCGCCGGTCACTCCAGCCCGCA
CCTTTTCACCTTCCCACCGACCCCTCCTAAAGATGTGTCCCCGGATCCGTCCATCTCCACTCCTGGCTCCACCGGCTCC
ACCCGGCAGGATGAGAAGGAATGCATCAAATATCAGGTGTCCCTGGCTGACACCATGAAGCTGGAGTCGTCTCACTCTA
GGAGCAGCATGGCCTCGTTAGGAGGAGCCACCTCCTCCGCTCATCACCCCATCACTACTTACCCACCGTATGTCCCCGA
ATATAGCTCTGGACTTTTTCCCCCCAGCAGCCTCTTAGGAGGATCGCCTACCGGGTTCGGGTGCAAATCACGACCGAAA
GCGCGGTCGAGCACAGAAGGCAGGGAGTGTGTAAATTGTGGGGCTACCTCAACCCCTCTGTGGAGAAGAGACGGCACCG
GGCACTACTTGTGTAACGCCTGTGGACTCTATCACAAAATGAATGGGCAGAACCGACCCCTGATTAAACCCAAGAGAAG
GCTGTCTGCAGCCAGGAGGGCGGGCACGTCCTGTGCTAACTGTCAGACCACCACCACCACCCTGTGGAGGAGAAATGCC
AACGGCGATCCTGTCTGTAATGCCTGTGGGCTCTACTACAAGCTGCACAATATTAACAGACCCCTGACTATGAAGAAAG
AAGGAATTCAGACCAGAAACCGAAAAATGTCTAGCAAATCCAAAAAGTGCAAAAAGGTCCATGACAACCTTGAAGACTT
TCCCAAGAGCAGCTCCTTTAACCCCGCCGCCCTCTCCAGACACATGTCCTCTATCAGCCACATTTCACCCTTCAGTCAC
TCCAGCCACATGCTGACTACACCGACACCGATGCATCCTCCATCCAGCCTCTCCTTTGGACCTCACCATCCCTCCAGCA
TGGTCACTGCCATGGGTTAGTGAGAGACTCCCCTGCTGAATGCTTACGGTCTCAAAATGAGATTTACTTTATATACTTG
CATTTTTGCAGGCGTGTGGTTATGGGTCTGATGTCCCAAATCAAATGGGAGGGGGAAAAAGAAAAAAAAAAGAATAAAA
AGAATAAAAATAAAAATGTTATTTGAAGGCGTAAGAGCAAAAAAAATAATAATAAAAAAAGAAAAAAACTACAAAAAGC
ACAAAAAAGGAAAAAAAAAGAAAAAAAAAAAAAAAA
CitationChristophorou NA, Mende M, Lleras-Forero L, Grocott T, Streit A. Pax2 coordinates epithelial morphogenesis and cell fate in the inner ear. Dev Biol. 2010 Sep 15;345(2):180-90. Epub 2010 Jul 17.
Copyright© 2010 Elsevier Inc. All rights reserved
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_001008444).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-11
stage 11
stage 11
stage 11
stage 11
Ear/Otic Placode
Eye
Oral Pharynx
Pharynx
Surface Ectoderm
 

Entry 7

GEISHA IdGATA3.Merchan.2011Data SourcePublication
Complete cDNA Template Probeshow
TGGAACCTCAGCCCTTTTTCCAAGACCTCCATCCATCACAGCTCGCCGGGACCCCTCTCCGTTTACCCGCCTGCTTCTT
CCTCCACTTTATCCGCCGGTCACTCCAGCCCGCACCTTTTCACCTTCCCACCGACCCCTCCTAAAGATGTGTCCCCGGA
TCCGTCCATCTCCACTCCTGGCTCCACCGGCTCCACCCGGCAGGATGAGAAGGAATGCATCAAATATCAGGTGTCCCTG
GCTGACACCATGAAGCTGGAGTCGTCTCACTCTAGGAGCAGCATGGCCTCGTTAGGAGGAGCCACCTCCTCCGCTCATC
ACCCCATCACTACTTACCCACCGTATGTCCCCGAATATAGCTCTGGACTTTTTCCCCCCAGCAGCCTCTTAGGAGGATC
GCCTACCGGGTTCGGGTGCAAATCACGACCGAAAGCGCGGTCGAGCACAGAAGGCAGGGAGTGTGTAAATTGTGGGGCT
ACCTCAACCCCTCTGTGGAGAAGAGACGGCACCGGGCACTACTTGTGTAACGCCTGTGGACTCTATCACAAAATGAATG
GGCAGAACCGACCCCTGATTAAACCCAAGAGAAGGCTGTCTGCAGCCAGGAGGGCGGGCACGTCCTGTGCTAACTGTCA
GACCACCACCACCACCCTGTGGAGGAGAAATGCCAACGGCGATCCTGTCTGTAATGCCTGTGGGCTCTACTACAAGCTG
CACAATATTAACAGACCCCTGACTATGAAGAAAGAAGGAATTCAGACCAGAAACCGAAAAATGTCTAGCAAATCCAAAA
AGTGCAAAAAGGTCCATGACAACCTTGAAGACTTTCCCAAGAGCAGCTCCTTTAAC
CitationMerchán,P, Bardet, SM, Puelles, L, Ferran, JL, Comparison of Pretectal Genoarchitectonic Pattern between Quail and Chicken Embryos. Front Neuroanat. 2011; 5: 23. Prepublished online 2010 December 29. Published online 2011 April 5
CopyrightCopyright © 2011 Merchán, Bardet, Puelles and Ferran.
CommentsThe probe was amplified by PCR using the following primers: 5′-TGGAACCTCAGCCCTTTTTCC-3' and 5′-GTTAAAGGAGCTGCTCTTGG-3′and was extracted form NCBI acc. # NM_001008444.1.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
stage 28
Diencephalon
Mesencephalon
Pineal Gland

CoP commissural pretectum,
Hab habenular region
JcP juxtacommissural pretectum,
OT optic tectum
PcP precommissural pretectum,
Quail
Th Thalamus,
mes mesencephalon,

Entry 8

GEISHA IdGATA3.Christophorou.2009Data SourcePublication
Complete cDNA Template Probeshow
TTTTAAATTTTTGGAACCGATCATTTCTCACCACCACCCCCCTCTTCCCTCCGATTACAAACCAACCTAACCCCAACCT
CGCCGAAGCTCTTTCCCCACCCCGACTCTGCACAGCCGTCCCCCCCTCCCTTCGCCAGCCTCGCTGAGGAGGAGGAGGA
GGAGGTGGAAGAGCAGCGAGCGCGGAAGATGGAGGTCTCCACGGACCAACCGCGGTGGGTGAGCCACCACCACCCGGCC
GTGCTCAATGGGCAGCACCCGGACTCCCACCACCCCACTCTTGGCCATACCTACATGGACCCCACGCAGTATCCTCTCG
CCGAGGAAGTGGATGTACTTTTTAATATCGACGGACAAGGCAACCCCGTGCCTCCGTATTACGGCAACTCCGTGCGAGC
CACCGTGCAGCGGTACCCCACGGCCCATCACGGCAGCCAGGTGTGCCGGCCCCCTCTGCTGCATGGTTCGCTGCCGTGG
CTGGACGGGAGCAAAGCGCTGAGCAGCCACCACAGCGCTTCCCCTTGGAACCTCAGCCCTTTTTCCAAGACCTCCATCC
ATCACAGCTCGCCGGGACCCCTCTCCGTTTACCCGCCTGCTTCTTCCTCCACTTTATCCGCCGGTCACTCCAGCCCGCA
CCTTTTCACCTTCCCACCGACCCCTCCTAAAGATGTGTCCCCGGATCCGTCCATCTCCACTCCTGGCTCCACCGGCTCC
ACCCGGCAGGATGAGAAGGAATGCATCAAATATCAGGTGTCCCTGGCTGACACCATGAAGCTGGAGTCGTCTCACTCTA
GGAGCAGCATGGCCTCGTTAGGAGGAGCCACCTCCTCCGCTCATCACCCCATCACTACTTACCCACCGTATGTCCCCGA
ATATAGCTCTGGACTTTTTCCCCCCAGCAGCCTCTTAGGAGGATCGCCTACCGGGTTCGGGTGCAAATCACGACCGAAA
GCGCGGTCGAGCACAGAAGGCAGGGAGTGTGTAAATTGTGGGGCTACCTCAACCCCTCTGTGGAGAAGAGACGGCACCG
GGCACTACTTGTGTAACGCCTGTGGACTCTATCACAAAATGAATGGGCAGAACCGACCCCTGATTAAACCCAAGAGAAG
GCTGTCTGCAGCCAGGAGGGCGGGCACGTCCTGTGCTAACTGTCAGACCACCACCACCACCCTGTGGAGGAGAAATGCC
AACGGCGATCCTGTCTGTAATGCCTGTGGGCTCTACTACAAGCTGCACAATATTAACAGACCCCTGACTATGAAGAAAG
AAGGAATTCAGACCAGAAACCGAAAAATGTCTAGCAAATCCAAAAAGTGCAAAAAGGTCCATGACAACCTTGAAGACTT
TCCCAAGAGCAGCTCCTTTAACCCCGCCGCCCTCTCCAGACACATGTCCTCTATCAGCCACATTTCACCCTTCAGTCAC
TCCAGCCACATGCTGACTACACCGACACCGATGCATCCTCCATCCAGCCTCTCCTTTGGACCTCACCATCCCTCCAGCA
TGGTCACTGCCATGGGTTAGTGAGAGACTCCCCTGCTGAATGCTTACGGTCTCAAAATGAGATTTACTTTATATACTTG
CATTTTTGCAGGCGTGTGGTTATGGGTCTGATGTCCCAAATCAAATGGGAGGGGGAAAAAGAAAAAAAAAAGAATAAAA
AGAATAAAAATAAAAATGTTATTTGAAGGCGTAAGAGCAAAAAAAATAATAATAAAAAAAGAAAAAAACTACAAAAAGC
ACAAAAAAGGAAAAAAAAAGAAAAAAAAAAAAAAAA
CitationChristophorou NA, Bailey AP, Hanson S, Streit A. Activation of Six1 target genes is required for sensory placode formation. Dev Biol. 2009 Dec 15;336(2):327-36. doi: 10.1016/j.ydbio.2009.09.025. Epub 2009 Sep 23.
CopyrightCopyright © 2013 Elsevier B.V. All rights reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_001008444.1
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4
stage 4
stage 4
Headfold
 

Mouse

EmageMGI:95663
MGI GXDMGI:95663

Frog

Xenbase485929

Fruit Fly

BDGPFBgn0001138

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-990415-82
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