GEISHA - A Chicken Embryo Gene Expression Database
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DKK1
dickkopf WNT signaling pathway inhibitor 1

Gene
Official SymbolDKK1
Official Full Namedickkopf WNT signaling pathway inhibitor 1
CGNC ID2791
also known asDKK4, dickkopf-related protein 1|dickkopf WNT signaling pathway inhibitor 4|dickkopf homolog 1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_421563
PolypeptideXP_421563
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.897
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human22943ENSG00000107984MIM:605189
Mouse13380ENSMUSG00000024868All phenotypic alleles (4):Targeted, knock-out(1) Targeted, other(3) MGI:1329040
Xenopus549037, 373592481643
Zebrafish799377, 30197ENSDARG00000014103, ENSDARG00000045219ZDB-GENE-090313-406, ZDB-GENE-990708-5ZFIN:ZDB-GENE-090313-406, ZFIN:ZDB-GENE-990708-5
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene374156
Ensembl GeneENSGALG00000003814
KEGGgga:374156

Entry 1

GEISHA IdDkk1.Chapman.2004Data SourcePublication
Complete cDNA Template Probeshow
CGACGAACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAGGAGGGCGACTTCTGCCTGCGCTCGTCGGACTGCG
CGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCAAACCCGTGCTGCGCGAGGGGCAGGTGTGCACCCG
GCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTGCCCCTGCGCCGAGGGCATGGCGTGCCGCCCGCAG
CGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAGCGGCACTGAGCGACGCCGCGGGGCGGACCGAGGA
TGGACGGACGGACGGACGGACGGGGGGATGGACTCTAGCCCCGCTCGTGGGAGCTCCCCGCTGTGCGCACAGCCGGAGC
AGAAGGTTGTTTCTCGAGGGAACTACTCTTAAGCGACTGATTGCAGTACGTTACTGTGTTGTGAATATGGAGGTGGCAC
TTAGTGTACAGACGTTCTGAGTGAGCCGCCCGGGCGCTCCTCCAGGCAGGACTGGGACGTGGTACGCGCTGGGTTTCCA
GTTGCGCTCGATGGACGCG
CitationChapman, S, Brown, R, Lees, L, Schoenwolf, G, Lumsden, A. Expression Analysis of Chick Wnt and Frizzled Genes and Selected Inhibitors in Early Chick Patterning. Dev Dyn. 2004 Mar;229(3):668-76.
CopyrightWiley-Liss, Inc. 2004
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # AY049017).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-5
stage 4
stage 4
stage 5
stage 5
Forebrain
Hensen's Node
Mesoderm, early
Neural Plate/Tube
Primitive Streak
rostral neural plate

Entry 2

GEISHA IdDickkopf1.Chapman.2002Data SourcePublication
Complete cDNA Template Probeshow
CGACGAACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAGGAGGGCGACTTCTGCCTGCGCTCGTCGGACTGCG
CGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCAAACCCGTGCTGCGCGAGGGGCAGGTGTGCACCCG
GCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTGCCCCTGCGCCGAGGGCATGGCGTGCCGCCCGCAG
CGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAGCGGCACTGAGCGACGCCGCGGGGCGGACCGAGGA
TGGACGGACGGACGGACGGACGGGGGGATGGACTCTAGCCCCGCTCGTGGGAGCTCCCCGCTGTGCGCACAGCCGGAGC
AGAAGGTTGTTTCTCGAGGGAACTACTCTTAAGCGACTGATTGCAGTACGTTACTGTGTTGTGAATATGGAGGTGGCAC
TTAGTGTACAGACGTTCTGAGTGAGCCGCCCGGGCGCTCCTCCAGGCAGGACTGGGACGTGGTACGCGCTGGGTTTCCA
GTTGCGCTCGATGGACGCG
CitationChapman SC, Schubert FR, Schoenwolf GC, Lumsden A. Analysis of spatial and temporal gene expression patterns in blastula and gastrula stage chick embryos. Dev Biol. 2002 May 1;245(1):187-99.
Copyright2002 Elsevier Science (USA). All rights reserved.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 2
stage 3
stage 3
Area Opaca
Epiblast
Primitive Streak
 
4-5
stage 4
stage 5
Early Endoderm
Head Process
Hensen's Node
Hypoblast
Notochord
Primitive Streak
 

Entry 3

GEISHA IdDkk-1.Manisastry.2006Data SourcePublication
Complete cDNA Template Probeshow
ATGGCGCAACCGAGCCGTCGGGGGGCCCCGAGGGCGAGGGGCGGGGGGAGCCGCGCCCCTTTGATCTCCGCGCATCAAA
GGCAGAGCCTCGCCCGGCCCCGCTCCCCCCGCCGCGGCGCGGCCCCCCCGGCCGAGGTCAGTCGAGTGCACGGGGGGGC
TCCGACGGGGCGGGCTCTCTTCCAGCCCCCCCAAACTCCGCGGGGCCGGGGGTGCGGAGCGGCCCCTTCCTGCGGGTCT
GCGCTGGCGCCAGGAAGGGAGCGCGGCGGAGCTACCGCCGCCGTTGCGAAATCCCCTCCCTCGGGGGGGGGGAACAGCG
GCACAGCCCCCCGGGGCCCTTTGAAATCCCATCCCTCCTCCCCGAAGGGCGGGCGCAGGAGGCAGCCCCCCGGGTATAA
AGAGGCGGCGGCGGGCAGAGATTTGATTAAAAATAAGTCTGCCGCTGCCGCCCCCGCGCCCTTCGACGGTAGCAACAAG
GCGCCGCCGGCCGCCACCCGGCAGCCCTTCCCCTGCTCCGAGGACGAGGACTGCGGCCCCGACGAATTCTGCGGAGGGG
CGGCCCGCGGCGGCGGCCCCCCGCTCTGCCTCGCGTGCAGGAGACGCCGCAAGCGCTGCCTGCGCGACGCCATGTGCTG
CCCGGGCACGGCCTGCAGCAACGGGCTNTGCACGCCCCCCGAACCCCCGCCCGGAGCTCCCGAGCTGGACGAGCCCGGC
CCCGAGGCGCTGCCCCGACGGACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAGGAGGGCGACTTCTGCCTGC
GCTCGTCGGACTGCGCGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCAAACCCGTGCTGCGCGAGGG
GCAGGTGTGCACCCGGCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTGCCCCTGCGCCGAGGGCATG
GCGTGCCGCCCGCAGCGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAGCGGCACTGAGCGACGCCGC
GGGGCGGACCGAGGATGGACGGACGGACGGACGGACGGGGGGATGGACTCTAGCCCCGCTCGTGGGAGCTCCCCGCTGT
GCGCACAGCCGGAGCAGAAGGTTGTTTCTCGAGGGAACTACTCTTAAGCGACTGATTGCAGTACGTTACTGTGTTGTGA
ATATGGAGGTGGCACTTAGTGTACAGACGTTCTGAGTGAGCCGCCCGGGCGCTCCTCCAGGCAGGACTGGGACGTGGTA
CGCGCTGAGTTTCCAGCTGCGCTCGATGGACGCG
CitationManisastry SM, Han M, Linask KK. Early temporal-specific responses and differential sensitivity to lithium and Wnt-3A exposure during heart development. Dev Dyn. 2006 Aug;235(8):2160-74.
CopyrightCopyright © 2006 Wiley-Liss, Inc.
CommentsAuthors said: "The chick probe for Dkk-1 was provided by Dr. Susan C. Chapman (University of Utah, Salt Lake City, UT)." Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_421563).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 4
Lateral Plate Mesoderm
Precardiac Region
neg. control shows some signal
7-11
stage 11
Unlabeled
 

Entry 4

GEISHA IdDkk1.Abe.2006Data SourcePublication
Complete cDNA Template Probeshow
ATGGCGCAACCGAGCCGTCGGGGGGCCCCGAGGGCGAGGGGCGGGGGGAGCCGCGCCCCTTTGATCTCCGCGCATCAAA
GGCAGAGCCTCGCCCGGCCCCGCTCCCCCCGCCGCGGCGCGGCCCCCCCGGCCGAGGTCAGTCGAGTGCACGGGGGGGC
TCCGACGGGGCGGGCTCTCTTCCAGCCCCCCCAAACTCCGCGGGGCCGGGGGTGCGGAGCGGCCCCTTCCTGCGGGTCT
GCGCTGGCGCCAGGAAGGGAGCGCGGCGGAGCTACCGCCGCCGTTGCGAAATCCCCTCCCTCGGGGGGGGGGAACAGCG
GCACAGCCCCCCGGGGCCCTTTGAAATCCCATCCCTCCTCCCCGAAGGGCGGGCGCAGGAGGCAGCCCCCCGGGTATAA
AGAGGCGGCGGCGGGCAGAGATTTGATTAAAAATAAGTCTGCCGCTGCCGCCCCCGCGCCCTTCGACGGTAGCAACAAG
GCGCCGCCGGCCGCCACCCGGCAGCCCTTCCCCTGCTCCGAGGACGAGGACTGCGGCCCCGACGAATTCTGCGGAGGGG
CGGCCCGCGGCGGCGGCCCCCCGCTCTGCCTCGCGTGCAGGAGACGCCGCAAGCGCTGCCTGCGCGACGCCATGTGCTG
CCCGGGCACGGCCTGCAGCAACGGGCTNTGCACGCCCCCCGAACCCCCGCCCGGAGCTCCCGAGCTGGACGAGCCCGGC
CCCGAGGCGCTGCCCCGACGGACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAGGAGGGCGACTTCTGCCTGC
GCTCGTCGGACTGCGCGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCAAACCCGTGCTGCGCGAGGG
GCAGGTGTGCACCCGGCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTGCCCCTGCGCCGAGGGCATG
GCGTGCCGCCCGCAGCGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAGCGGCACTGAGCGACGCCGC
GGGGCGGACCGAGGATGGACGGACGGACGGACGGACGGGGGGATGGACTCTAGCCCCGCTCGTGGGAGCTCCCCGCTGT
GCGCACAGCCGGAGCAGAAGGTTGTTTCTCGAGGGAACTACTCTTAAGCGACTGATTGCAGTACGTTACTGTGTTGTGA
ATATGGAGGTGGCACTTAGTGTACAGACGTTCTGAGTGAGCCGCCCGGGCGCTCCTCCAGGCAGGACTGGGACGTGGTA
CGCGCTGAGTTTCCAGCTGCGCTCGATGGACGCG
CitationAbe Y, Chen W, Huang W, Nishino M, Li YP. CNBP regulates forebrain formation at organogenesis stage in chick embryos. Dev Biol. 2006 Jul 1;295(1):116-27. Epub 2006 Apr 19.
CopyrightReprinted from Developmental Biology, 295, Yoko Abea, Wei Chena, Wei Huangc, Mizuho Nishinod and Yi-Ping Li, CNBP regulates forebrain formation at organogenesis stage in chick embryos, 116-127, Copyright 2006, with permission from Elsevier. Copyright © 2006 Elsevier B.V. All rights reserved.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19
stage 19
Forebrain
Midbrain
Somites
Anatomy.

Entry 5

GEISHA IdDkk1.Chapman.2008Data SourceDirect Submission
Complete cDNA Template Probeshow
CGACGAACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAGGAGGGCGACTTCTGCCTGCGCTCGTCGGACTGCG
CGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCAAACCCGTGCTGCGCGAGGGGCAGGTGTGCACCCG
GCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTGCCCCTGCGCCGAGGGCATGGCGTGCCGCCCGCAG
CGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAGCGGCACTGAGCGACGCCGCGGGGCGGACCGAGGA
TGGACGGACGGACGGACGGACGGGGGGATGGACTCTAGCCCCGCTCGTGGGAGCTCCCCGCTGTGCGCACAGCCGGAGC
AGAAGGTTGTTTCTCGAGGGAACTACTCTTAAGCGACTGATTGCAGTACGTTACTGTGTTGTGAATATGGAGGTGGCAC
TTAGTGTACAGACGTTCTGAGTGAGCCGCCCGGGCGCTCCTCCAGGCAGGACTGGGACGTGGTACGCGCTGGGTTTCCA
GTTGCGCTCGATGGACGCG
CommentsImages Provided by Susan Chapman
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 1
stage 1
stage 1
stage 2
stage 3
stage 3
stage 3
stage 3
Area Opaca
Area Pellucida
Epiblast
Hensen's Node
Primitive Streak
Unlabeled
stage XIV
4-6
stage 4
stage 4
stage 4
stage 4
stage 4
stage 4
stage 4
stage 5
stage 5
stage 6
stage 6
Area Pellucida
Epiblast
Germinal Crescent
Head Process
Headfold
Hensen's Node
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
 
7-12
stage 7
stage 7
stage 7
stage 7
stage 7
stage 7
stage 7
stage 8
stage 8
stage 9
stage 10
stage 10
stage 10
stage 10
stage 10
stage 11
stage 11
Anterior Intestinal Portal
Forebrain
Head Mesenchyme
Head Process
Headfold
Hensen's Node
Hindbrain
Hypoblast
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Pharynx
Primitive Streak
Somites
Spinal Cord
Tail
 
13-17
stage 17
stage 17
stage 17
Head Mesenchyme
Pharyngeal Arches and Clefts
Pineal Gland
Tail
 

Entry 6

GEISHA IdDKK1.Foley.2000Data SourcePublication
Complete cDNA Template Probeshow
ATGGCGCAACCGAGCCGTCGGGGGGCCCCGAGGGCGAGGGGCGGGGGGAGCCGCGCCCCTTTGATCTCCGCGCATCAAA
GGCAGAGCCTCGCCCGGCCCCGCTCCCCCCGCCGCGGCGCGGCCCCCCCGGCCGAGGTCAGTCGAGTGCACGGGGGGGC
TCCGACGGGGCGGGCTCTCTTCCAGCCCCCCCAAACTCCGCGGGGCCGGGGGTGCGGAGCGGCCCCTTCCTGCGGGTCT
GCGCTGGCGCCAGGAAGGGAGCGCGGCGGAGCTACCGCCGCCGTTGCGAAATCCCCTCCCTCGGGGGGGGGGAACAGCG
GCACAGCCCCCCGGGGCCCTTTGAAATCCCATCCCTCCTCCCCGAAGGGCGGGCGCAGGAGGCAGCCCCCCGGGTATAA
AGAGGCGGCGGCGGGCAGAGATTTGATTAAAAATAAGTCTGCCGCTGCCGCCCCCGCGCCCTTCGACGGTAGCAACAAG
GCGCCGCCGGCCGCCACCCGGCAGCCCTTCCCCTGCTCCGAGGACGAGGACTGCGGCCCCGACGAATTCTGCGGAGGGG
CGGCCCGCGGCGGCGGCCCCCCGCTCTGCCTCGCGTGCAGGAGACGCCGCAAGCGCTGCCTGCGCGACGCCATGTGCTG
CCCGGGCACGGCCTGCAGCAACGGGCTNTGCACGCCCCCCGAACCCCCGCCCGGAGCTCCCGAGCTGGACGAGCCCGGC
CCCGAGGCGCTGCCCCGACGGACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAGGAGGGCGACTTCTGCCTGC
GCTCGTCGGACTGCGCGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCAAACCCGTGCTGCGCGAGGG
GCAGGTGTGCACCCGGCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTGCCCCTGCGCCGAGGGCATG
GCGTGCCGCCCGCAGCGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAGCGGCACTGAGCGACGCCGC
GGGGCGGACCGAGGATGGACGGACGGACGGACGGACGGGGGGATGGACTCTAGCCCCGCTCGTGGGAGCTCCCCGCTGT
GCGCACAGCCGGAGCAGAAGGTTGTTTCTCGAGGGAACTACTCTTAAGCGACTGATTGCAGTACGTTACTGTGTTGTGA
ATATGGAGGTGGCACTTAGTGTACAGACGTTCTGAGTGAGCCGCCCGGGCGCTCCTCCAGGCAGGACTGGGACGTGGTA
CGCGCTGAGTTTCCAGCTGCGCTCGATGGACGCG
CitationFoley AC, Skromne I, Stern CD. Reconciling different models of forebrain induction and patterning: a dual role for the hypoblast. Development. 2000 Sep;127(17):3839-54.
CopyrightPrinted in Great Britain © The Company of Biologists Limited 2000
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_421563).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage XII
Hypoblast
Stage XII-XIII EG&K
1-3
stage 2
Hypoblast
 
4
stage 4
stage 4
Hypoblast
 

Entry 7

GEISHA IdDKK1.Geetha-Loganathan.2009Data SourcePublication
Complete cDNA Template Probeshow
ATGGCGCAACCGAGCCGTCGGGGGGCCCCGAGGGCGAGGGGCGGGGGGAGCCGCGCCCCTTTGATCTCCGCGCATCAAA
GGCAGAGCCTCGCCCGGCCCCGCTCCCCCCGCCGCGGCGCGGCCCCCCCGGCCGAGGTCAGTCGAGTGCACGGGGGGGC
TCCGACGGGGCGGGCTCTCTTCCAGCCCCCCCAAACTCCGCGGGGCCGGGGGTGCGGAGCGGCCCCTTCCTGCGGGTCT
GCGCTGGCGCCAGGAAGGGAGCGCGGCGGAGCTACCGCCGCCGTTGCGAAATCCCCTCCCTCGGGGGGGGGGAACAGCG
GCACAGCCCCCCGGGGCCCTTTGAAATCCCATCCCTCCTCCCCGAAGGGCGGGCGCAGGAGGCAGCCCCCCGGGTATAA
AGAGGCGGCGGCGGGCAGAGATTTGATTAAAAATAAGTCTGCCGCTGCCGCCCCCGCGCCCTTCGACGGTAGCAACAAG
GCGCCGCCGGCCGCCACCCGGCAGCCCTTCCCCTGCTCCGAGGACGAGGACTGCGGCCCCGACGAATTCTGCGGAGGGG
CGGCCCGCGGCGGCGGCCCCCCGCTCTGCCTCGCGTGCAGGAGACGCCGCAAGCGCTGCCTGCGCGACGCCATGTGCTG
CCCGGGCACGGCCTGCAGCAACGGGCTNTGCACGCCCCCCGAACCCCCGCCCGGAGCTCCCGAGCTGGACGAGCCCGGC
CCCGAGGCGCTGCCCCGACGGACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAGGAGGGCGACTTCTGCCTGC
GCTCGTCGGACTGCGCGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCAAACCCGTGCTGCGCGAGGG
GCAGGTGTGCACCCGGCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTGCCCCTGCGCCGAGGGCATG
GCGTGCCGCCCGCAGCGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAGCGGCACTGAGCGACGCCGC
GGGGCGGACCGAGGATGGACGGACGGACGGACGGACGGGGGGATGGACTCTAGCCCCGCTCGTGGGAGCTCCCCGCTGT
GCGCACAGCCGGAGCAGAAGGTTGTTTCTCGAGGGAACTACTCTTAAGCGACTGATTGCAGTACGTTACTGTGTTGTGA
ATATGGAGGTGGCACTTAGTGTACAGACGTTCTGAGTGAGCCGCCCGGGCGCTCCTCCAGGCAGGACTGGGACGTGGTA
CGCGCTGAGTTTCCAGCTGCGCTCGATGGACGCG
CitationGeetha-Loganathan, P, Nimmagadda, S, Antoni, L, Fu, K, Whiting, C, Francis-West, P and Richman, J. Expression of WNT signalling pathway genes during chicken craniofacial development. DEVELOPMENTAL DYNAMICS Volume 238, Issue 5, May 2009, Pages: 1150–1165.
CopyrightDev. Dyn Copyright © 2009 John Wiley & Sons, Inc. All Rights Reserved.
CommentsAuthors indicated the probe could be found in another publication (see text). As this information was insufficient to determine the precise probe, we've included NCBI acc# XM_421563 for this gene.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
stage 18
stage 18
Eye
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
 
19-24
stage 21
stage 24
Face Mesenchyme
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Surface Ectoderm
 
25-28
stage 28
Face Mesenchyme
Pharyngeal Arches and Clefts
Surface Ectoderm
 

Entry 8

GEISHA IdDKK1.Sienknecht.2009Data SourcePublication
Complete cDNA Template Probeshow
CCGCCGGCCGCCACCCGGCAGCCCTTCCCCTGCTCCGAGGACGAGGACTGCGGCCCCGACGAATTCTGCGGAGGGGCGG
CCCGCGGCGGCGGCCCCCCGCTCTGCCTCGCGTGCAGGAGACGCCGCAAGCGCTGCCTGCGCGACGCCATGTGCTGCCC
GGGCACGGCCTGCAGCAACGGGCTNTGCACGCCCCCCGAACCCCCGCCCGGAGCTCCCGAGCTGGACGAGCCCGGCCCC
GAGGCGCTGCCCCGACGGACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAGGAGGGCGACTTCTGCCTGCGCT
CGTCGGACTGCGCGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCAAACCCGTGCTGCGCGAGGGGCA
GGTGTGCACCCGGCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTGCCCCTGCGCCGAGGGCATGGCG
TGCCGCCCGCAGCGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAGCGGCACTGAGCGACGCCGCGGG
GCGGACCGAGGATGGACGGACGGACGGACGGACG
CitationSienknecht UJ, Fekete DM. Mapping of Wnt, frizzled, and Wnt inhibitor gene expression domains in the avian otic primordium. J Comp Neurol. 2009 Dec 20;517(6):751-64.
CopyrightCopyright © (2002 Wiley-Liss); This material is used by permission of Wiley-Liss, Inc., a subsidiary of John Wiley & Sons, Inc.
CommentsAuthors gave NCBI acc# in the paper
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 16
stage 16
Ear/Otic Placode
 
19-23
stage 20
stage 20
stage 23
stage 23
Ear/Otic Placode
 

Entry 9

GEISHA IdDKK1.Anderson.2020Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
GAACAGCGGCACAGCCCCCCGGGGCCCTTTGAAATCCCATCCCTCCTCCCCGAAGGGCGGGCGCAGGAGGCAGCCCCCC
GGGTATAAAGAGGCGGCGGCGGGCAGGTAGCGCTGCTCGGGGGCACGGAGCGCAGCGCCGAAGTACGGACGGGACGGGG
CGGACGGGTCGGGACAGACGGGCGATGCGGGCTCTGCTGGCGCTGCTGGCGGCCCTGAGCTGCGCGGGGCGGGCGGGGG
CCGGCGGCGGCCTCAGCTCCAACGCCATCAAGGTGGGGGCGGCCGCCAGCGCCGCCCCCGCCGCCGCCGCCCCCGCGCC
CTTCGACGGTAGCAACAAGGCGCCGCCGGCCGCCACCCGGCAGCCCTTCCCCTGCTCCGAGGACGAGGACTGCGGCCCC
GACGAATTCTGCGGAGGGGCGGCCCGCGGCGGCGGCCCCCCGCTCTGCCTCGCGTGCAGGAGACGCCGCAAGCGCTGCC
TGCGCGACGCCATGTGCTGCCCGGGCACGGCCTGCAGCAACGGGCTCTGCACGCCCCCCGAACCCCCGCCCGGAGCTCC
CGAGCTGGACGAGCCCGGCCCCGAGGCGCTGCCCCGACGGACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAG
GAGGGCGACTTCTGCCTGCGCTCGTCGGACTGCGCGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCA
AACCCGTGCTGCGCGAGGGGCAGGTGTGCACCCGGCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTG
CCCCTGCGCCGAGGGCATGGCGTGCCGCCCGCAGCGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAG
CGGCACTGAGCGACGCCGCGGGGCGGACCGAGGATGGACGGACGGACGGACGGACGGGGGGATGGACTCTAGCCCCGCT
CGTGGGAGCTCCCCGCTGTGCGCACAGCCGGAGCAGAAGGTTGTTTCTCGAGGGAACTACTCTTAAGCGACTGATTGCA
GTACGTTACTGTGTTGTGAATATGGAGGTGGCACTTAGTGTACAGACGTTCTGAGTGAGCCGCCCGGGCGCTCCTCCAG
GCAGGACTGGGACGTGGTACGCGCTGAGTTTCCAGCTGCGCTCGATGGACGCGGCCGCCCCTTCAGGTGAAGGGCAGCC
CACGCTGCGCGGTGCCACGCTCCGGGGCGATGCCCCACGGAGGCGGCGGGGTCGCAGAGCGGGACCTCAGCGGCCCCGG
CCCTGAGCCGTGCGGTCGCGCCGCTCTGGGCACAATAAAGTCTATT
CommentsImages provided by Claire Anderson. As insufficient information was provided to verify sequence used to synthesize probe, the sequence was obtained from NCBI (accession number XM_015278709.2).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
Early Endoderm
Early Mesoderm
Headfold
Hensen's Node
Hypoblast
Notochord
Primitive Streak
stage 5+
7-9
stage 8
stage 8
stage 8
stage 8
stage 8
stage 8
stage 8
stage 8
stage 9
Anterior Intestinal Portal
Endoderm
Forebrain
Hensen's Node
Neural Plate/Tube
Notochord
Pharynx
Primitive Streak
Somites
extraembryonic endoderm
stage 8+
stage 8+, section 1
stage 8+, section 2
stage 8+, section 3
stage 8-
stage 8-, section 1
stage 8-, section 2
stage 8-, section 3

Entry 10

GEISHA IdDKK1.Lee.2020Data SourcePublication
Complete cDNA Template Probeshow
GAACAGCGGCACAGCCCCCCGGGGCCCTTTGAAATCCCATCCCTCCTCCCCGAAGGGCGGGCGCAGGAGGCAGCCCCCC
GGGTATAAAGAGGCGGCGGCGGGCAGGTAGCGCTGCTCGGGGGCACGGAGCGCAGCGCCGAAGTACGGACGGGACGGGG
CGGACGGGTCGGGACAGACGGGCGATGCGGGCTCTGCTGGCGCTGCTGGCGGCCCTGAGCTGCGCGGGGCGGGCGGGGG
CCGGCGGCGGCCTCAGCTCCAACGCCATCAAGGTGGGGGCGGCCGCCAGCGCCGCCCCCGCCGCCGCCGCCCCCGCGCC
CTTCGACGGTAGCAACAAGGCGCCGCCGGCCGCCACCCGGCAGCCCTTCCCCTGCTCCGAGGACGAGGACTGCGGCCCC
GACGAATTCTGCGGAGGGGCGGCCCGCGGCGGCGGCCCCCCGCTCTGCCTCGCGTGCAGGAGACGCCGCAAGCGCTGCC
TGCGCGACGCCATGTGCTGCCCGGGCACGGCCTGCAGCAACGGGCTCTGCACGCCCCCCGAACCCCCGCCCGGAGCTCC
CGAGCTGGACGAGCCCGGCCCCGAGGCGCTGCCCCGACGGACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAG
GAGGGCGACTTCTGCCTGCGCTCGTCGGACTGCGCGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCA
AACCCGTGCTGCGCGAGGGGCAGGTGTGCACCCGGCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTG
CCCCTGCGCCGAGGGCATGGCGTGCCGCCCGCAGCGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAG
CGGCACTGAGCGACGCCGCGGGGCGGACCGAGGATGGACGGACGGACGGACGGACGGGGGGATGGACTCTAGCCCCGCT
CGTGGGAGCTCCCCGCTGTGCGCACAGCCGGAGCAGAAGGTTGTTTCTCGAGGGAACTACTCTTAAGCGACTGATTGCA
GTACGTTACTGTGTTGTGAATATGGAGGTGGCACTTAGTGTACAGACGTTCTGAGTGAGCCGCCCGGGCGCTCCTCCAG
GCAGGACTGGGACGTGGTACGCGCTGAGTTTCCAGCTGCGCTCGATGGACGCGGCCGCCCCTTCAGGTGAAGGGCAGCC
CACGCTGCGCGGTGCCACGCTCCGGGGCGATGCCCCACGGAGGCGGCGGGGTCGCAGAGCGGGACCTCAGCGGCCCCGG
CCCTGAGCCGTGCGGTCGCGCCGCTCTGGGCACAATAAAGTCTATT
CitationHyung Chul Lee, Hui-Chun Lu, Mark Turmaine, Nidia M. M. Oliveira, Youwen Yang† , Irene De Almeida and Claudio D. Stern. Molecular anatomy of the pre-primitive streak chick embryo Open Biol. null. 10.1098/rsob.190299.
CopyrightCopyright © 2020 The Authors.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_015278709.2). DKK1 also known as DKK4 in NCBI.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
X-XIV
stage X
stage X
stage XII
stage XII
stage XIV
Area Opaca
Area Pellucida
Epiblast
Hypoblast
Kohler's Sickle
GW, germinal
Stage EGK X-XI
Stage EGK XII-XIII
Stage EGK XIII-XIV
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.897

Mouse

EmageMGI:1329040
EurexpressMGI:1329040
MGI GXDMGI:1329040

Frog

Xenbase481643

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-090313-406, ZDB-GENE-990708-5
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