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A chicken embryo gene expression database 		 
GEISHA - A Chicken Embryo Gene Expression Database
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Gene Expression Report

Probe 1

GEISHA IdEphA9.Baker.2003
 NCBIEnsembl
Gene NameEPHA1NP_989691.1
AliasesEPHA9, ephrin receptor EphA1|protein tyrosine kinase EphA9 
Gene DescriptionEPH receptor A1ephrin receptor EphA1 [Source:RefSeq_peptide;Acc:NP_989691]
Gene Ontologyshow
GO:0000166 nucleotide binding IEA
GO:0004872 receptor activity IEA
GO:0005003 ephrin receptor activity IEA
GO:0005524 ATP binding IEA
GO:0006468 protein amino acid phosphorylation IEA
GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEA
GO:0016020 membrane IEA
GO:0016021 integral to membrane IEA
GO:0016740 transferase activity IEA
show
GO:0004672 protein kinase activity IEA
GO:0004713 protein-tyrosine kinase activity IEA
GO:0004872 receptor activity IEA
GO:0005003 ephrin receptor activity IEA
GO:0005524 ATP binding IEA
GO:0006468 protein amino acid phosphorylation IEA
GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEA
GO:0016020 membrane IEA
GO:0016301 kinase activity IEA
NCBI Nucleotide HitNM_204360 show details
scoreevaluealignment lengthdescription
18350.01835Gallus gallus EPH receptor A1 (EPHA1), mRNA
Ensembl Genome Map
contig view
CitationBaker RK, Antin PB. Ephs and ephrins during early stages of chick embryogenesis Dev Dyn. 2003 Sep;228(1):128-42.
Copyright2003 Wiley-Liss, Inc.
Complete Sequenceshow
AATCACCCAAACATCGTACATCTGGAAGGAGTTGTCACCAAAAGAAGGCCAATGATGATCATCACTGAGTACATGGAGA
ATGGAGCTCTGGATACCTTCCTCCGGGAGAATGAGGAAAAATTTAGCCCTGTGCAGCTTGTGAACATGCTGCAGGGAAT
AGCCTCCGGCATGACCTACCTTTCAGAACACAACTATGTGCACCGGGATCTGGCTGCTCGCAACATCCTGGTAACACGT
AGCCTTCAATGCAAGGTGTCTGACTTTGGTCTTTCCCGAATATTGGAGAATGATGCAGAGGGAACATATGAAACCAAGG
GTGGTAAGATTCCGATCCGATGGACAGCCCCAGAGGCCATTGCTCATCGGATTTTCACCTCAGCCAGTGATGTCTGGAG
CTTTGGAATTGTCATGTGGGAGGTGCTGTCATTTGGTGACAAGCCATATGGGAATATGACCAATCAAGAGGTGATGAAA
AGCTTAGAGGATGGGTACCGGCTTCCCCCACCTGTGGACTGCCCATCCATCCTCTATGAGCTAATGAAGAGCTGCTGGT
CACATGATCGAATGAGGAGGCCTCATTTCCAGGAGATCCGGGCACAGCTGCAACACTTCAGCTCAAGCCCCCATCTCCT
TCGGTGTGTTGCAGACTTTGATCCCAGGGTAACGCTCCGGCTCCCCAGCTGCAGCGGATCTGATGGTATCCCTTATCGA
TCTATTCCCGAGTGGCTGGAATCCATTCCGATGAAGCGTTATATCTCCAACTTTCGCACTGCTGGCCTTGACACCATGG
AGTCAATTCTGGACCTCACTGCTGAGGACTTGAAACAGATGGGAGTGTCACTTCCAGGCCACCAGAAGAGGATTCTGTG
TAGCATCCAAGGCTTTAAGGAGTGACCAGTTGTTGCTCTCTCAAGCTTGCCAAATGCTGTCTTACCAGATATCACTTGG
AATCATTCCTATGGCAATTGCTTCCAAATGAGTGACTGGGACAAGCAAAGCAAAACAACCAGGACTGAAAAGACTTTAT
GAGGCAACACCACCTGCTCTCATTTCTGTTTCCCCTTGCTTGAGCCAGCAGTACTTTTCAGAACACTGGTCTTAGAATC
TGTTCTCAATCCTGTCTTCTACTGTTAGTTCAGTGCAGCACAGAATAATCCCTGTAGTCCACATAATGGACTTTCGAGC
CCTCAGGTAATAACATGGAAATATAAGGATACATACAACTGCAGGGTGGGGATTGGGATAATGTTTTAAGATTGAAAAT
GAGGATTCAGAAGCTGTGGAACCTTCAGAAAACATGCGCGAGGATGCAAACGTAGAGGTTGGGCACATTCACTCCTTGA
TGCACATCCCTTCTCATTTCAGCAGCCTTCTGTCTTCCTTATTTCACAATAGGAACAACCTATTCAATCCTTCACAAGG
CTGCTGCTAAGGGATATGTTTTTAAATTAAGCTATTCTTGCTTTAAACACCACCAAGTCATGGTGTACTTTGTTCTTTG
AAGGAGAAGTTGGGAGTAGCAGCGCACCCTGCTGTAACTTGTGTGATCATGTAACCTTGGCATGTTGCTTACTTGCACG
TGTACTTCAGCAGAGTGATTTACCTCTCTTCAACCTGCTTAATACCTTTACTTGTTCCATAGACACAAAACCTTGTAGG
TACCAATTTTTCTCTGCCCCTTTTTTGAAGGAGGGACTGAATAAGGTATTCGTAACAGAAAAATGTAGAGGTGGTCTGT
CATTCCTTCTCTGTGAAGGAAGTATTATTATTTATCAGAACTCAAGACAGAGGTGCTACAGACTGTAAATAGTATTTTG
TAAATAAACTTGAGGCAG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3

Epiblast

Primitive Streak

 
4-6
stage 4
stage 4
stage 4
stage 6

Epiblast

Notochord

Primitive Streak

 
7-12
stage 8
stage 11
stage 12

Epiblast

Forebrain

Primitive Streak

Rhombomeres

Tail

r5

Probe 2

GEISHA IdEphA9
 NCBIEnsembl
Gene NameEPHA1NP_989691.1
AliasesEPHA9, ephrin receptor EphA1|protein tyrosine kinase EphA9 
Gene DescriptionEPH receptor A1ephrin receptor EphA1 [Source:RefSeq_peptide;Acc:NP_989691]
Gene Ontologyshow
GO:0000166 nucleotide binding IEA
GO:0004872 receptor activity IEA
GO:0005003 ephrin receptor activity IEA
GO:0005524 ATP binding IEA
GO:0006468 protein amino acid phosphorylation IEA
GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEA
GO:0016020 membrane IEA
GO:0016021 integral to membrane IEA
GO:0016740 transferase activity IEA
show
GO:0004672 protein kinase activity IEA
GO:0004713 protein-tyrosine kinase activity IEA
GO:0004872 receptor activity IEA
GO:0005003 ephrin receptor activity IEA
GO:0005524 ATP binding IEA
GO:0006468 protein amino acid phosphorylation IEA
GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEA
GO:0016020 membrane IEA
GO:0016301 kinase activity IEA
NCBI Nucleotide HitNM_204360 show details
scoreevaluealignment lengthdescription
39020.03902Gallus gallus EPH receptor A1 (EPHA1), mRNA
Ensembl Genome Map
contig view
Complete Sequenceshow
ATTCAGCGGCCGCTGAATTCTACAGGAGAACAGGCAGGGGCTGGGATCAAGGCCCCCCTCCAACCAGCATGGAGCTGAG
GATGGGCAGGATCGAGCTCTCCCTTGGGATCCTCCTCTTTGGGTCTCTCCTTCCAGCTGAGGTGCTTGGGAAAGAAGTG
AATCTGCTAGACACAAGCACTGCACAGGGTGAGCTGGGCTGGCTTCCAGACCCTCCAGAAATAGGGTGGAGTGAAGTGC
AGCAGATGATAAATGGTACCCCAGTCTATATGTACCAGGACTGCAGCGTGCTCTCTGAGGGTGACACTGATCACTGGCT
TCGCACCAACTGGATTTATCGGGGTGAGGCAGCATCTCGCATTTATGTGGAGCTGAAGTTTACTGTGAGAGACTGCAAG
AGCTTCAAAGGTGAAGCGGTGACCTGCAAAGAGACTTTCAACCTCTACTACATGGAGTCTGAGCAGGATGTCGGGATCC
AGTTCCGCCGCCCAATGTTCATCAAGCTCAACACTGTGGCAGCAGATCGAAGTTTCACAAACAGAGACATCGAATCTGG
TGCCATGCAGCTGAACACAGAAGTGTGCCCCATTGGGAAGCTGTCTCGTCGGGGCTTCTACTTAGCTTTCCAGAACTCT
GGGGCTTGTGTAGCAATGGTGTCTGTTCGAGTATATTACAAGACTTGCCCAGAGGCAGTGCAGGGCCTTGCCCGTTTTC
CAGAGACACTAGCAGGCTTGGAGGGGCTCACAGAAGTGCCTGGTGTATGCGTGGAATATGCAGCTGAAGAAACAGGCTC
TCCCCCGAGGATGCACTGCAGCACAGATGGGGAGTGGCTGGTACCAATGGGCCGATGCCTTTGTGCTGTGGGGTTTGAG
GAAGTCGATGGGAGCTGCGTAGCCTGCCAGCGAGGATTCTACCGTCACTCTCTGGAGACTAAACGTTGCCTGAAGTGCC
CCCCAAACAGCTTGTCCAATGAGTTAGGGGCTACATCTTGTTCCTGCAATGCAGGCTTCTATCGGGCACCTTCAGAGGG
CCAAAACATCGCTTGCACCCGTCCTCCCTCAGCTCCCCGCAATGTCAGCTTCTCCCTTACTGGCACACAGCTCAGTCTG
TGGTGGCAGCCACCCAGTGACCACGGTGGGCGGAAGGACCTAACTTACACAGTCTTCTGTCAGCGCTGTCATTTCCTGT
CATGTGATCCATGTGAGCCTGGTGTGGTATTCTCCCCAAGTTCTTCAGGTCTCACCAAAACTGCTGTGGATGTGGATGG
CCTAGAAGCTTACACCAACTACACATTTGCTGTGGAAGCCCATAATGGTGTCTCAGGAATGGGACCTGCTCCACAGAGA
ACTGCTCCAGCTGTCTGGGTTGCAGTTGGACATGCAGCTCCAGTGACAGTATCCCAGTTTATCCTGACACAGAGAGATG
ACAGTAGTCTGTCTGTTTCTTGGCTTGCCCCACGGCAGCGCAGCCGGACCTCAGTGGAGTACGAGGTCATGTTCTTTGA
GAAGGGAGAGGAGGCACGTTACACAGTGAAGCACCTTCTTGAGCCAAATGTCACTCTGACAGACCTTCAGCCAGACACA
ACCTACCTGCTTCGTGTGAGATCCATCACACCCCTTGGGCCTGGGCCCTACTCCCAGGAGCAGGAATTCCGCACCCTTC
CGCCAGGCACCGGAGCTCTGTCTGGTGGTGTCATGGCATCTATTATCTTTGGAGTTCTGCTATTTATTGGGCTGCTTCT
GGGAATTCTGTTCTTTCGACGAAAGAAGGCTCACCGCAGACAGGCACGGCCTGATTACAGTACTTCAGGCTTTGATCGA
GAGAAGGTCTGGTTGAAGCCCTATGTGGACCTGCAACCATATGATGACCCCAGTAGAGGTGTTCTGGAGTTCATTAAGG
AACTGGATGTCTCTTGTGTCACTATGGAGAATGTGATTGGAGAAGGGGAGTTTGGGGAGGTCTATCGTGGGTCCCTGCG
GCTCCCAGGGAAAGAACGTATTGTGGTTGCCATCAAAACCCTCAAGTCAACATATTCAGACTCACAATGGTGGAACTTC
CTGCGTGAGGCAACAATTATGGGGCAGTTCAATCACCCAAACATCGTACATCTGGAAGGAGTTGTCACCAAAAGAAGGC
CAATGATGATCATCACTGAGTACATGGAGAATGGAGCTCTGGATACCTTCCTCCGGGAGAATGAGGAAAAATTTAGCCC
TGTGCAGCTTGTGAACATGCTGCAGGGAATAGCCTCCGGCATGACCTACCTTTCAGAACACAACTATGTGCACCGGGAT
CTGGCTGCTCGCAACATCCTGGTAACACGTAGCCTTCAATGCAAGGTGTCTGACTTTGGTCTTTCCCGAATATTGGAGA
ATGATGCAGAGGGAACATATGAAACCAAGGGTGGTAAGATTCCGATCCGATGGACAGCCCCAGAGGCCATTGCTCATCG
GATTTTCACCTCAGCCAGTGATGTCTGGAGCTTTGGAATTGTCATGTGGGAGGTGCTGTCATTTGGTGACAAGCCATAT
GGGAATATGACCAATCAAGAGGTGATGAAAAGCTTAGAGGATGGGTACCGGCTTCCCCCACCTGTGGACTGCCCATCCA
TCCTCTATGAGCTAATGAAGAGCTGCTGGTCACATGATCGAATGAGGAGGCCTCATTTCCAGGAGATCCGGGCACAGCT
GCAACACTTCAGCTCAAGCCCCCATCTCCTTCGGTGTGTTGCAGACTTTGATCCCAGGGTAACGCTCCGGCTCCCCAGC
TGCAGCGGATCTGATGGTATCCCTTATCGATCTATTCCCGAGTGGCTGGAATCCATTCCGATGAAGCGTTATATCTCCA
ACTTTCGCACTGCTGGCCTTGACACCATGGAGTCAATTCTGGACCTCACTGCTGAGGACTTGAAACAGATGGGAGTGTC
ACTTCCAGGCCACCAGAAGAGGATTCTGTGTAGCATCCAAGGCTTTAAGGAGTGACCAGTTGTTGCTCTCTCAAGCTTG
CCAAATGCTGTCTTACCAGATATCACTTGGAATCATTCCTATGGCAATTGCTTCCAAATGAGTGACTGGGACAAGCAAA
GCAAAACAACCAGGACTGAAAAGACTTTATGAGGCAACACCACCTGCTCTCATTTCTGTTTCCCCTTGCTTGAGCCAGC
AGTACTTTTCAGAACACTGGTCTTAGAATCTGTTCTCAATCCTGTCTTCTACTGTTAGTTCAGTGCAGCACAGAATAAT
CCCTGTAGTCCACATAATGGACTTTCGAGCCCTCAGGTAATAACATGGAAATATAAGGATACATACAACTGCAGGGTGG
GGATTGGGATAATGTTTTAAGATTGAAAATGAGGATTCAGAAGCTGTGGAACCTTCAGAAAACATGCGCGAGGATGCAA
ACGTAGAGGTTGGGCACATTCACTCCTTGATGCACATCCCTTCTCATTTCAGCAGCCTTCTGTCTTCCTTATTTCACAA
TAGGAACAACCTATTCAATCCTTCACAAGGCTGCTGCTAAGGGATATGTTTTTAAATTAAGCTATTCTTGCTTTAAACA
CCACCAAGTCATGGTGTACTTTGTTCTTTGAAGGAGAAGTTGGGAGTAGCAGCGCACCCTGCTGTAACTTGTGTGATCA
TGTAACCTTGGCATGTTGCTTACTTGCACGTGTACTTCAGCAGAGTGATTTACCTCTCTTCAACCTGCTTAATACCTTT
ACTTGTTCCATAGACACAAAACCTTGTAGGTACCAATTTTTCTCTGCCCCTTTTTTGAAGGAGGGACTGAATAAGGTAT
TCGTAACAGAAAAATGTAGAGGTGGTCTGTCATTCCTTCTCTGTGAAGGAAGTATTATTATTTATCAGAACTCAAGACA
GAGGTGCTACAGACTGTAAATAGTATTTTGTAAATAAACTTGAGGCAGAGCCG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-5
stage 5

Primitive Streak

 
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