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A chicken embryo gene expression database
 
GEISHA - A Chicken Embryo Gene Expression Database
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Gene Expression Report

Probe 1

GEISHA Id51C
 NCBIEnsembl
Gene NameNBR1ENSGALG00000002765
Gene Descriptionneighbor of BRCA1 gene 1neighbor of BRCA1 gene 1 (NBR1), transcript variant 3, mRNA [Source:RefSeq_dna;Acc:NM_031862]
NCBI Nucleotide HitXM_418128 show details
scoreevaluealignment lengthdescription
3200.0320PREDICTED: Gallus gallus neighbor of BRCA1 gene 1 (NBR1), mRNA
Ensembl Genome Map
contig view
Commentsubiquitous embryonic expression stages 4-25, not extraembryonic at later stages
5' Sequenceshow
GAGCTCAGACACAAAGCTGAAACTTATGTGGGGAAATCTCACCTTGGCATCTTCTGAGAAAAAGGATGTGTTGGTACCA
TCCATACCAACGGGGCAAGTAGGAACTGTTTCAGTTGAGTTTGTGGCTCCCAATATAGAAGGAACTTATACCTCTCACT
GGAGGCTGTCGCACAGAGGGGAACAGTTTGGACCTAGAATCTGGTGCAGTATTGTTGTGGATCCCTCGCCAGCTACTGA
CTCTTTAGAAAGCAATTGGAAGGATTTTGATTCACGTCATAAAGGTGATACTTCCAGTAACAAACAGGATGCTTACTTG
AAGACAGAAAGAAATGCTCACGTTACAGGTGAAATTGTGGAACAGGCTGAGATATCTCTGCCAGCTTTTCCTTTGAAAA
TGAAAAACCTAGCCAGTGAGAGAGAATTCTATATCCCATCTGTTGATCTTCTCACTGCACAGGATTTGCTGTCTTTTGA
GCTACTGGACATCAATATTGTACAGGAATTAGAGCGAGTGCCACACAATACTCCTGTTGACATGACTCCATGCATGTCC
CCTTTGCCACATGATAGCCTCTTGCTAGAGAAACCTGGCTTAGATCAGATAGACGAGGAGAATGAGGG
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-21
stage 21

Ubiquitous Embryonic

Unlabeled Extraembryonic

stages 18 through 21 show same pattern

Probe 2

GEISHA IdChEST508p18
 NCBIEnsembl
Gene NameNBR1ENSGALG00000002765
Gene Descriptionneighbor of BRCA1 gene 1neighbor of BRCA1 gene 1 (NBR1), transcript variant 3, mRNA [Source:RefSeq_dna;Acc:NM_031862]
NCBI Nucleotide HitXM_418128 show details
scoreevaluealignment lengthdescription
8560.0872PREDICTED: Gallus gallus neighbor of BRCA1 gene 1 (NBR1), mRNA
Ensembl Genome Map
contig view
Commentsno specific expression detected stages 5-23.
5' Sequenceshow
GCGGCTCGAGGAGGAAGGGGTTGAACGTTGGGTTGTTGGTTACTACGACGTGGGCTGCTGCTAGAGCTGTGGCGGGCGC
ATGGAGCCGCAAGTGAATCTTCGCGTCAGCTACCGCGGGGAAACCCAGAGCTTCCTGGTGTCAGACACAGCGCACACGA
CCTGGGCCGATGTGGAGGCTATGGTTAAAGTTTCATTTGACCTGGATGATATTCAGATAAAATACATTGATGAGGATAA
TGATGAGGTGTCTGTGAATAGCAAAGAGGAATATGAAGAAGCTCTGAAGATTGCAGTTAAACAAGGAAATCAACTTCAG
ATGAATGTGTATGAAGAAAGCTCTCCTCTGAAAGAAACTTCATCTTGTTCTTGGCAACTGCATGAAAAAACAGTCACAG
AGAAGTTGGCAGTTCTTAAAGATGAGCTGGCAGCTCAGCAAAAGTTAAATCACAATAGAACAGGAAGAACAAATCAAAG
TCCTCCAGAATGGTTTACTAGCTACTTGGAAACATTCAGGGAGCAAGTGGTGAAGGAAACTGTTGAGCAGCTAGAGCAG
AAGTTATATGAGAAGCTTATTCATCACAATCAGTCTTCAGACTTCTCTGAGAGCTCTGTTACAACAGCACCTCCCAATT
CAGAGACCCAAACAAAGAATGGTAATCAATGTGACTGGCTCATCTCCTGCTGCAACTGCCAGGCTCGAATTGTTGGAGT
TCGCTACCAGTGCAGTCTCTGTCCAGCCTACAATATTTGTGAACAGTGTGAAGCAAGAATGTATGCACACGATCCTAAT
CATATATTGCTAAATCTACGAAGACCTATGCTATGTATTGCTGAAAACTACGACGTTGCACAGTTTTCACTTGCTTGCC
CACTACTCTGGAAGCAGTAAGGGCTCCGAAGGCGATAGAC
no images
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